Stomoxys calcitrans (stable fly): 106088734
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Entry
106088734 CDS
T07664
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
scac
Stomoxys calcitrans (stable fly)
Pathway
scac03030
DNA replication
scac03420
Nucleotide excision repair
scac03430
Mismatch repair
scac03440
Homologous recombination
scac03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
scac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
106088734
03420 Nucleotide excision repair
106088734
03430 Mismatch repair
106088734
03440 Homologous recombination
106088734
03460 Fanconi anemia pathway
106088734
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scac03000
]
106088734
03032 DNA replication proteins [BR:
scac03032
]
106088734
03400 DNA repair and recombination proteins [BR:
scac03400
]
106088734
Transcription factors [BR:
scac03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
106088734
DNA replication proteins [BR:
scac03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
106088734
DNA repair and recombination proteins [BR:
scac03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
106088734
MMR (mismatch excision repair)
106088734
DSBR (double strand breaks repair)
HR (homologous recombination)
106088734
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
DUF223
tRNA_anti-codon
IBR
ZSWIM1-3_helical
Zn_Ribbon_TF
Motif
Other DBs
NCBI-GeneID:
106088734
NCBI-ProteinID:
XP_013109852
UniProt:
A0A1I8QBZ9
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Position
2:complement(40576853..40581701)
Genome browser
AA seq
600 aa
AA seq
DB search
MPGIAPLSVGVIPRMMAGEEVESPVFQILGVKRIVGGENERIRLLISDSIYFNSYAMVAT
QLNSMFTEDKLKENSIVRVDKYVTSVVNKNDSGRRVLIILEMTILNTGDQVNKKIGEPIS
YTEAATNSKPTAAVVAPKQQENKPKPMHTNHNNNHTLDQTINSGLTHPIASLSPYQNKWV
IKVRVTAKSSLRTWSNAKGEGKLFSMDLMDESGEIRATAFKEQCDKYFDMIEVDKVYYIS
KCQLKPANKQYSTLKNDYEMTFTSDTVVQLCEDDDDGGIPEVKYDLISISRVANMEPKTS
VDVIGVCKEVGELQVFTSRTTNKEFKKRDLTLVDASDAAVTLTIWGDDAVNFDGHVQPVI
LVKGGRINEFNGGKSISMGGGSVMKINPDIPEGHKLRGWFDNGGGANITTLVSARTGAGG
FSTEWRTFHEARNLGTGDKPDYFQTKAVVHLVKSNNAYYKACPQAECNKKVIDENNGHYR
CERCNAVFPNFKYRLLVNMSIGDWTSNRWVTCFSDIGEQLLGRSAQEIGEAMDNNPTEAE
EIFNSINFHSFIFKLRSKVETYGDMSRSKLTVQAATPVNYKEYNKYLINNLKELTGINKV
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgccaggcattgcaccactatctgttggcgtcattccgcgtatgatggccggcgaagaa
gtcgaatctcctgtttttcagatactaggcgtaaaacgcattgtgggaggggagaatgaa
cgcatacgtttattgatttctgatagtatttatttcaatagttatgccatggtggcgacg
caactgaattccatgtttacagaggacaagttgaaggaaaattccatagttcgtgtggat
aaatatgtaacatcggtggtcaataaaaacgattcaggaagacgtgtgcttatcattttg
gaaatgactattctgaatactggcgatcaagtgaataaaaaaatcggtgaacccatttca
tacacagaggcagctactaattccaagcccactgccgctgttgttgcacccaaacaacag
gaaaacaaaccaaagcccatgcatacaaatcacaacaacaatcatactttggaccaaacc
attaattcaggcttaacacatcccattgcaagtctaagcccatatcaaaataagtgggtc
atcaaagttcgagttaccgccaagtcatcattgcgtacctggagtaatgccaaaggtgag
ggcaaactattcagcatggatttaatggatgagtcgggagaaattcgtgctactgctttc
aaagagcaatgcgataaatattttgatatgattgaggtcgataaggtctactacatttcg
aaatgtcaattgaagccggccaataagcagtacagcactttgaaaaatgactatgaaatg
acttttacaagtgatactgtagtccaattatgtgaagatgatgatgatggtggtatacca
gaagttaaatatgatttgatatctatttctcgtgtggccaatatggaaccaaaaacttct
gttgacgttattggtgtatgcaaggaagttggtgaattgcaagtctttacttcacgaacc
acaaacaaagagtttaagaagcgtgatttgaccttagtggatgcaagtgacgccgcggta
acccttacaatatggggcgatgatgccgttaatttcgacggccatgtgcagccggtgata
ttggttaagggtggtcgtattaatgaattcaatggtggcaagtctataagcatgggtggc
ggatcggtaatgaaaatcaatcctgacattcccgagggacataaactacgtggctggttc
gataatggtggaggtgccaatataactactcttgtatcagctagaactggtgctggaggc
ttctccaccgaatggcgtactttccatgaggctcgcaatttggggactggtgataagcca
gactatttccaaaccaaggctgtggtgcatttagttaaaagcaacaatgcctattataag
gcttgtcctcaagccgaatgcaataaaaaggttattgatgaaaataatggtcattatcgt
tgtgaaagatgcaatgctgtattccccaatttcaaataccgcttgttggttaatatgagc
attggtgattggacttcaaatcgctgggtcacttgtttcagtgatataggcgaacagctg
ttgggccgttcagctcaagaaatcggagaagctatggataacaatcccacagaagctgaa
gaaattttcaattctataaatttccattcctttatattcaaactgcgttcaaaagtcgaa
acatatggcgacatgagccgcagcaagttaacagtgcaggcggcaacaccagtcaactat
aaggaatacaacaagtatttgataaacaatttgaaagaattaaccggtattaataaggtt
tag
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