Stomoxys calcitrans (stable fly): 106088754
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Entry
106088754 CDS
T07664
Name
(RefSeq) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
scac
Stomoxys calcitrans (stable fly)
Pathway
scac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106088754
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scac03019
]
106088754
Messenger RNA biogenesis [BR:
scac03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
106088754
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_16
TPR_8
TPR_14
TPR_19
TPR_CcmH_CycH
TPR_12
TPR_17
TPR_9
ARM_TT21_C
TPR_11
ANAPC3
TPR_Slam
PPTA
TPR_30
COG4_N
EAD11
Motif
Other DBs
NCBI-GeneID:
106088754
NCBI-ProteinID:
XP_013109877
UniProt:
A0A1I8P3W2
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Position
5:88072603..88086165
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AA seq
1237 aa
AA seq
DB search
MATKEMKTLLKEIREAIKSEKYEEAIKKCQEVLKTEPTSYMGHLLMGAAYQNSNKQEAAK
YLRKAVEYSSPQPPTVALQGLSNCAPTEELPKIYEQLIQLVPEKHLDYFEKLYNVSTSYA
KIAPECLEIFKRLIANPDLESHKAILLKYYGRVVMRYDFSIEAEDESVYKSCLEEIISDN
TLGDHLPAHKRYLKLLYKQQQLDICLANACKLVEFYPDDIYAYEWICKIYCENYDTGNSS
LLENLAQPIEVYASKLSVLNPQSGLALLIQAIDKYRAEQYVAARDCLYKVLVIQPNYSVA
MRLLACTEMQLEAYGLADALWQQLSDTTSVDYAICVSYGEDQEKLSAAVEILKAQEKSED
VVRGLARCYFKLGDARNLNRLQMSDLCKAEFLYYDSPDEAIQFLGSTWEDLETFPALVLR
GNYYYQLQDYSSALMCVLKATRLRPYSSECFYHLGKIYFASNDLVRSRKCFEKCVTLNPL
NEDAVESLSAIYQQFGEEDLNVALLLNTLKRLKTPKKFKHIHYKLGLHYLNVNNCDEAIQ
CFRNAIKHDVSCMIYWESLGDAYAVRGSYNSAIRVFQKVLEMEPTNIYAKLQMAIMKTTI
RMYSDAIEDFENLLKEHTDYLPALKGKAEAHIGLANFLNSEHRYGRAKDHLQMAVNMLQR
CFLNPENLNMVWLWRLTAKVFVSTARMPESLANLDVSGKLAKRDSDIAFLTRKDLLNLAL
RFYTCALKLKQNTYLWYELALCSYYSANILTEDGQSHLEMATKACQMAIKEDPNRWHNWN
LLGVINLHLLVNNLPMAQHCFVQALNLERKSYTTWTNLGVLYLKLNEIKMANQAFQRAQQ
SSPVYGNAWIGQAMIAECINEEEEAVDLFRHCQQFEYHPESSLGYAHWVCHILSDKEKCM
LPHYKHAVDSMYADVVAFDAINWYTINEENEASTSAWSFLGFLCDRHRLYRLATKAYAKA
AERSSGAERDLMYTNLGYSHLRLNEPNEAIIAFNKIAHASFKPMIGLALAYYKAGQHQES
YSVYKSVLKTVAGIEDDKASRILVAMASMVYAFQGEADTKTILYQCILLKDSPIQALFSA
CALGILHQDNQLSETILTELKKRENSEEHVADIAFLTAQYYLVNKQPRKALSYLMTRVHI
FPNCSQLRKVLANFLLDNYGGKRQYENATSQIALSAITLVHASKTKKSNAMEDSQTLLVA
SKALEPVDKNRSLKLIQRAILLHPRNVNAWNALLAVH
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atggctactaaagaaatgaaaactcttttaaaagaaatacgagaagctataaaatcagaa
aaatatgaggaggccattaaaaagtgtcaagaagtgcttaagactgaacccacaagctat
atgggtcatcttttgatgggagctgcttaccaaaattcaaataaacaagaagcagccaaa
tatttacggaaagctgttgagtattcatcaccccaaccgccaactgttgctctacagggt
ttgtcgaattgtgcccccaccgaggaattgccaaaaatctatgaacagttgatacagctg
gtgccagaaaagcatttggattatttcgaaaaattatacaatgtctccacatcatatgcc
aaaattgctcccgaatgcttggagattttcaaacgtcttattgcgaacccggatttggag
tcgcataaggctattctactcaagtattatggtagagtggtaatgcgatatgatttttcc
atcgaggcagaggatgaaagtgtgtataaatcatgtttggaggaaattataagcgataac
actttaggcgatcatttgcctgcccacaaacgttatctcaagctactctacaaacaacag
caattggatatatgcctggccaatgcatgtaaactggttgaattttatcccgatgatatt
tatgcctacgaatggatatgcaaaatttattgtgaaaactatgacactggaaatagctct
ttattggagaatctcgcacaacccattgaggtttatgcttcaaaactttcagtattaaat
ccacaatcaggtttggccctactcatacaggccatagacaaatatagagccgaacaatat
gtagctgcccgagattgtttgtataaagtgcttgtgatacaaccaaactactctgtggct
atgcgcctattggcttgcacagaaatgcaattagaagcctatggcttggcagatgcactg
tggcaacagttgagcgatacaactagtgttgactatgcaatttgtgtgtcttatggcgaa
gatcaggaaaaactaagcgcagctgtggagattctgaaggcccaagagaaatcggaagat
gttgtaagaggtttagcgaggtgctactttaagttgggggacgcacgcaatcttaatcgt
ctacaaatgagcgacctgtgtaaagcggagttcctatactatgattcccccgatgaggct
attcaatttctgggctcaacttgggaagatttagaaacatttccagccctcgttctaaga
ggcaactattattatcagttgcaggactacagtagtgcgttgatgtgtgttctgaaagca
actcgcttacgtccatatagctccgaatgtttttatcatttgggaaaaatatattttgcc
tcgaacgatttggtacgttctcgtaaatgctttgagaaatgtgtaaccttaaatccccta
aatgaggatgctgtggaaagtctttcggccatttatcagcaatttggcgaagaggatttg
aatgttgccttacttctgaatactctgaagcggctaaaaactcccaagaagttcaaacac
attcactataaacttggcttacattatttgaatgtgaataactgcgatgaggccatacaa
tgcttccgtaatgccattaaacacgacgtatcttgcatgatttattgggagtctttggga
gatgcgtacgccgttagaggttcttacaattcggccataagagtatttcaaaaagttttg
gaaatggagcctaccaacatctatgccaaactgcagatggccataatgaaaaccaccata
cgaatgtattcggatgctatagaggattttgagaatctgctcaaggaacacaccgattat
ttgcctgccctgaagggaaaggcagaagctcatataggtttggcaaattttcttaattcg
gaacatcgttatggccgtgctaaggatcatctacaaatggccgttaatatgctacagaga
tgtttcttgaatcctgaaaacttaaacatggtttggttatggcgcctgacagcgaaagtt
tttgtttctaccgcccgaatgccagagtctttggccaatctggatgttagcggaaaattg
gccaagcgagattcggacattgcattcctaacacgcaaagatttgctgaacttagctttg
agattctacacttgtgccttgaagttgaaacaaaacacttatctctggtatgagctagcc
ttgtgctcttactacagtgcaaatatcttgacggaagacggacagtcccatttggaaatg
gccaccaaagcttgtcaaatggctattaaggaagacccaaatagatggcacaattggaat
cttttgggggtcataaatttgcatttacttgtcaacaatttacctatggcccagcattgc
tttgtccaagctctgaatttagaacgcaaatcctataccacatggaccaatttgggagtg
ttgtatttgaaattgaatgaaatcaaaatggcaaatcaagctttccaaagagctcaacaa
tcgtcgcctgtttatggcaatgcctggattggtcaagctatgattgctgaatgcatcaac
gaagaggaggaagctgtcgatctgttccgtcattgtcaacagtttgagtatcatccggaa
tcgtctttgggctatgcgcattgggtgtgccatattctatcggacaaggagaaatgtatg
ctgccccattataaacatgccgtggactccatgtacgctgatgttgtggcatttgatgcc
ataaactggtataccatcaacgaggaaaacgaagcatccacaagtgcttggtcatttctg
ggctttctgtgtgatcgacataggctctataggctggcaaccaaagcctacgccaaagca
gctgaaagatccagtggtgcggagcgcgatttgatgtataccaatttgggctatagtcat
ttgcgattgaacgaaccaaacgaggccataatagctttcaacaaaattgcccatgcttcg
tttaagccaatgatcggcttggccttggcatattataaagcaggtcagcatcaagaatca
tattcggtctataagtcagtgctgaaaaccgttgctggcattgaagatgacaaagcttca
agaattttggtggcaatggcctcaatggtctatgcctttcagggcgaagctgataccaag
acaatattgtatcaatgcattcttttgaaggattctcctatacaggccttattttccgcc
tgtgccttgggcattttacatcaagacaatcagttatccgaaaccatattgaccgagttg
aagaaacgggaaaactcggaagagcatgttgccgatatagccttcttaacagcccaatac
tatttggtgaataaacaaccacgcaaggccttgtcctatttgatgactagggtgcacatt
ttccccaattgctcccaactgcgtaaggtattggccaatttccttctggataactatggt
ggcaaacgtcaatacgaaaatgcaaccagtcaaatagcattgagtgccataacactggtg
catgctagcaaaacaaaaaagagcaatgctatggaagattctcaaactttattggttgcc
agcaaggctctagagcctgttgataaaaatcgctcattgaaattgatacagagagccatt
ctactgcatccaagaaatgtaaatgcttggaatgctttattggcagtccattga
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