Stomoxys calcitrans (stable fly): 106088913
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Entry
106088913 CDS
T07664
Name
(RefSeq) putative ATP-dependent RNA helicase DHX57 isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
scac
Stomoxys calcitrans (stable fly)
Pathway
scac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106088913
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scac03019
]
106088913
03012 Translation factors [BR:
scac03012
]
106088913
Enzymes [BR:
scac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
106088913
Messenger RNA biogenesis [BR:
scac03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
106088913
Translation factors [BR:
scac03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
106088913
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4780
DEAD
NB-ARC
Rad17
nSTAND3
AAA_19
AAA_22
AAA_16
ABC_tran
nSTAND1
PhoH
RsgA_GTPase
AAA_30
Motif
Other DBs
NCBI-GeneID:
106088913
NCBI-ProteinID:
XP_059221861
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All DBs
Position
3:84505114..84509903
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AA seq
566 aa
AA seq
DB search
MNRLFNGWDTSNSELSPSWMGVEETTFSMDNDTEYDVRLEVLRKVRSFGAHTSRAASICS
WSSSMNNNMQMPGYNNANLKEELLQKNESRIFQEIFQTRKGLTAVQQCRDILRAIRAHQV
VMVVGRSGCGKTTQIPQMILDDFIFNNCGTDCRIACIETRATRAVSAAERVAYERLESVG
NSIGLEIEGQSIMPRHTGHILFCTAHILTKKFESDPLLQSVTVVILDDIQTQNSEELHRL
MDLLQTILPHRADLKIILLSTTASEDSFCDYFKDYHAMFIHETIQPKLSTASSMSTIPEI
IQDAESIITISDGDSTIMENNYRKSMNILRRYEGKDASVLSRKEKNLIRTHKRNVKRLER
MSALKSSPKMNTTPGMRIKTRQNSMDICNDLQVAIIDKSDLHGRLDDNLWMKLEERLLSD
MISSKWCNEEISFDGANWSRGVKIVKCGNHRSIDFLRDTVASVCERWPHLQLEVIPQSML
PLRVLAKMWIPPPVPPTNAILSLIEKQNAGIDTKDWKILNYIPCKNNFGQIYRLYIDGLS
AKVIHECQGRIKFGLNFIRIHTMLKK
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgtctttttaatggatgggacacgtctaatagtgagctctctccttcttggatg
ggagtagaagaaacaacgttttcgatggataatgatacggaatatgatgtgcgtctggaa
gtacttagaaaagtgcggagttttggagcgcataccagcagagctgcaagtatttgttct
tggtcttcctcaatgaacaataatatgcaaatgccaggttataacaacgcgaatttaaag
gaagagttgttgcaaaagaatgagtcaaggatatttcaggaaatttttcaaacacgtaaa
ggactaactgccgtccagcagtgtcgagacattttaagagccataagagcccatcaagtg
gtaatggtcgttgggagatcgggatgtggcaagacaacacagattccccaaatgatactg
gatgatttcatcttcaacaattgtggcacagattgtcgcattgcctgcattgagactaga
gcaacgagggcagtttcggcagcggagcgtgtggcttatgaaagattggaatcagtggga
aattcaattggacttgaaattgaagggcaaagtattatgccgcgtcatactggccacatt
ttgttttgcaccgcccatattctgaccaaaaaatttgaaagtgatcctttgcttcaaagc
gtaacagttgttatattggatgacatacaaacccaaaatagtgaagaacttcatcggcta
atggatcttttacaaactatattaccccatcgagctgatttgaaaattattctattgagt
acaactgcttctgaagactcattttgtgactactttaaagactatcatgcaatgtttata
catgaaacaatacaaccgaaattatctactgcgtctagcatgtcaacaataccagaaatt
atacaggatgctgagagcatcataacaatttcggatggagactcgactataatggagaac
aactatagaaaatccatgaatattcttaggagatatgaaggcaaagatgccagtgtgctt
tctagaaaagaaaaaaatctcattagaacacacaagagaaatgtaaaacgtttagaaaga
atgtccgccctaaagagttcgcctaaaatgaacacaacacctggcatgcgcatcaaaacc
cggcagaatagtatggatatttgtaatgatttacaggtagcaataattgataaatctgat
ctacatggaagacttgatgacaacttatggatgaagctagaagaaagattgctcagcgac
atgatatccagcaaatggtgtaacgaggaaatatcattcgatggagcaaattggtctaga
ggtgtgaaaattgtcaaatgtggcaaccatagatcgatagattttttaagggacactgta
gcgagtgtttgtgaacgctggccgcatcttcaacttgaagtaatacctcagtcaatgttg
cccttgagagtattggccaagatgtggataccgccaccagttccaccgacaaatgctatt
ctatcactgattgaaaaacagaatgcaggcatcgatacaaaagattggaaaatactaaat
tacattccatgtaaaaataattttggtcaaatttatcgtctttacatagatggtttgtcg
gccaaggttatacatgaatgtcagggtcgcattaaatttggactgaactttataagaatt
catactatgttaaaaaaatag
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