Stomoxys calcitrans (stable fly): 106088917
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Entry
106088917 CDS
T07664
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
scac
Stomoxys calcitrans (stable fly)
Pathway
scac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106088917
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scac03019
]
106088917
03012 Translation factors [BR:
scac03012
]
106088917
Enzymes [BR:
scac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
106088917
Messenger RNA biogenesis [BR:
scac03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
106088917
Translation factors [BR:
scac03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
106088917
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
Helicase_C
HA2_N
HA2_C
nSTAND3
AAA_19
PhoH
AAA_22
AAA_11
SRP54
T2SSE
AAA_14
ResIII
AAA_7
FtsK_SpoIIIE
ABC_tran
ATPase
NB-ARC
Rad17
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
106088917
NCBI-ProteinID:
XP_013110085
UniProt:
A0A1I8PT68
LinkDB
All DBs
Position
3:84512247..84523474
Genome browser
AA seq
961 aa
AA seq
DB search
MNRNRRYHRGGGGGGGGRGRGGRPPGLSGREIGMYYRDLQKSRKEEEHRTGGIRLNPGMD
VPPGVLNQIFKCLERFEKQNQDERVCNEFQEYFHRLLNVSFEEFLNESKRNYGSVDVDQG
DAHSLRLKAELERKGDSEEYKKKLKMRQKLPAMQQKDDILKAIQDNQIVLVVGSTGCGKT
TQIPQMILDAYIQAEKGHACRVVCTQPRRISAISVAERVAYERNESLGSSVGYQIRLESR
MPRDDGSILYCTTGILLQKMQTDPLMSGLTTVILDEIHERSVETDLLMGLLKIILPYRPD
LKVILMSATVSEETFCEYFNNCHTIYIHGTLFPVDVLYLEDVLQETGYTNFQNDIMAATR
KNGRQRNNREQQDTQYSSMINSYLPSIRDKYDKQVIDTLRRYSDTEGCGNLNFLEYLIFY
ICEHKPPGAILVFLPGYERISKLNDQLQRPTNPSHQRLVEGIQVYPLHSMMPTVNQRSVF
EPPPAGTRKVILSTILAETSVTIDDVVYVINTGRTKVSDYDIEQNIQTLQEQWVSLANSK
QRKGRAGRVQPGVCYNLFTRGRERLMDDIPSPEILRNKLESIILHLKLLHIKEPFDFLKT
LINVPDIRAINHGLRLLKCIDALDEDCNLTPLGLHLARLPIDPQMGKMILMAALFRCLDP
ITSAAAGISFKSPFYTPLGLEHKVDNVKRDLSLNSKSDHLLIHNVIKGYRENRQQGSDMN
FCYRNFLSKSTLSQIENMKQQFADILKNSSFLESSDCCAKNSNINSNNIPLLRAIIASGL
YPNLAFLRKVKRVGRRVHAIHSMSTPVDRKVNFHPSSVNSGEASFDSNYFVYFQKQRTCQ
VYLLDATMVFPMALLIFGDGVKQGELSANEPYISVADTYYFKCEPETSSVILKLRQLLGV
LLRKKALHPSPIEINSDDEQLIRAIHLLLSLDDIGSHLDQYPSDDEDDDDDFDMDHDGVT
P
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgaatcggaatcgccgatatcatcgtggtggtggtggtggtggtggaggccgtggacgt
ggtggacggccacctggtttgagtggccgtgaaataggaatgtactatagagatttacaa
aagtccagaaaggaagaggaacatcgcacgggtggcatacggctcaatcctggcatggat
gtaccacccggtgtacttaaccaaattttcaaatgcttggaaagatttgaaaaacaaaat
caggatgaacgtgtttgtaacgaatttcaggagtactttcaccgtctgctcaatgtaagc
tttgaagagtttttgaacgaatccaagcgaaactatggctccgtggatgtggaccaggga
gatgcacacagtttacgtttaaaagcggaattggaaagaaaaggtgacagcgaagaatat
aaaaagaaattaaaaatgcgccaaaaactacccgccatgcaacagaaagatgacatactc
aaagcaatacaggataaccaaattgttctggtagttggaagtacggggtgtggaaaaact
acacaaataccgcaaatgatattggatgcttatattcaggcagaaaaagggcatgcatgt
cgagttgtatgcactcaaccaagaagaatatcagcaatatctgttgccgaacgtgttgcc
tatgaaaggaatgagtccttgggaagttctgtgggatatcaaatacgtttagaaagtcgc
atgccccgcgatgatggctccattttgtattgcaccactgggattctattacaaaaaatg
caaacggatcctttgatgagtggactgacaacagttattctagatgaaatacacgagcgt
agtgtggaaactgatcttctaatgggacttttgaaaattattcttccttaccgtccagac
ttgaaagtgattttaatgagtgccactgtttcggaggaaacattttgtgaatattttaat
aattgtcatacaatctatatacacggaacgctgtttcctgtcgatgtgctgtatttggaa
gatgtattgcaggagactggctacaccaactttcaaaacgatattatggcggcaactcga
aaaaatggacgccaaagaaataatagggaacagcaagatacacaatattccagtatgatc
aactcgtacttgccttcgataagggataaatatgataagcaagtaatagataccttaaga
cgctacagcgataccgagggatgcggaaatttgaactttttggagtatttaattttctac
atatgcgagcataaacctccaggagccattctggtgtttctgccaggctatgagagaata
tccaaattaaatgatcagttgcaaaggccaacgaatccgagtcatcaacgtttggtcgaa
ggaatacaggtttatccattacattctatgatgcctacagttaatcagcgtagtgtgttt
gagccaccaccggcaggcacgcgcaaagtaattctttcaactattttggcagaaacttct
gtgacaatagatgatgttgtgtatgtcatcaacacaggccgaactaaggtgagtgattat
gacatcgaacagaatatacagaccttgcaggagcaatgggtcagcttagctaactccaag
cagcgtaaaggtcgtgcgggacgtgttcaaccaggcgtatgctacaatttatttacaagg
gggagagaacgtttgatggatgacataccttcacctgaaattctacgcaacaaattggaa
tctataatactgcatttaaaattgttgcacatcaaggagccttttgattttctaaagact
ttaataaatgtaccagatatacgagcaatcaatcatggcctgcgtcttttaaaatgcatt
gatgctttggatgaagactgcaatttgacaccattaggactgcatctggctcgcttgccc
atagacccgcaaatgggtaaaatgattcttatggcggctctttttcgttgtttggatccc
attacatcagccgctgctggcatctcatttaagagtcccttctacacaccattgggtttg
gaacataaggttgacaatgttaaacgagatctatctttgaattcaaaaagcgatcatttg
ttaatacacaatgtcataaagggctatcgcgagaaccggcagcaaggtagtgatatgaat
ttttgttataggaattttttgagtaaatccactttgtctcaaattgaaaatatgaaacaa
caatttgctgatattttaaaaaattcaagttttctagaatcctccgattgctgtgctaaa
aactcaaatattaattccaacaacatacctctactaagagctataatagcttcaggatta
tatccaaatctggcatttctgaggaaagtaaaaagagttggtcgaagagttcatgccatt
cacagtatgtctacgccggtggatcgaaaggtaaattttcatccatcttcagtgaatagt
ggcgaagcatcctttgattccaattactttgtatatttccaaaagcagcgtacatgtcaa
gtttatttactggatgccacaatggtttttcccatggccttgctgatatttggtgatggc
gtcaaacagggtgaactatctgctaacgaaccctatattagtgttgcggatacctattat
ttcaaatgtgagccggagacatcatcggttattttgaaattacgtcaattgcttggtgtt
ttgctgaggaaaaaagctttacatccttcgcccatagagataaacagtgacgacgaacaa
ctgataagagccatacacctgctgctttctttggatgatattggtagtcatctcgatcag
tatcctagtgatgatgaagatgacgacgatgattttgatatggatcatgatggtgttacc
ccctaa
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