Stomoxys calcitrans (stable fly): 106088920
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Entry
106088920 CDS
T07664
Name
(RefSeq) uncharacterized protein LOC106088920
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
scac
Stomoxys calcitrans (stable fly)
Pathway
scac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106088920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scac03019
]
106088920
03012 Translation factors [BR:
scac03012
]
106088920
Enzymes [BR:
scac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
106088920
Messenger RNA biogenesis [BR:
scac03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
106088920
Translation factors [BR:
scac03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
106088920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4780
Motif
Other DBs
NCBI-GeneID:
106088920
NCBI-ProteinID:
XP_013110087
UniProt:
A0A1I8PC82
LinkDB
All DBs
Position
3:84500173..84503067
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AA seq
679 aa
AA seq
DB search
MDMASYKRQKVPKREQAFDEIRRLAYKFVGKSVPDDFQNIKEEHSNNDVGKESFENSRLK
MELLNKKESNIFKKIFEKRLKLAAVQKGFEFLEAYKIHQVLLVVGSKKSGRSTQIPQILL
DEYILNNKASECRIACVQIMAHKVETMAKEVAHERDEVVGKSVGYQSKRGHIPPRDNGSI
LFCTAGMLFHRFKDDPFLKKFSAIILDDMQDRTFEYTQVMRLLSIMLPFRRDFKVIMLAS
HQCKRKFAEFFKHYDIFNIDEGDEDKVNNDSILENDFKSHDGRANNSPKVGSTPSSDYLD
NWNLKNPQEHKFSSADISATISDILASRRSMMDDNNVDDDNVLEGKCKKMEHEYRCSIEF
LSLYIDSDLQTISDLDRALINSNRKNIIKFERRYPHLADKKSVFILEKTDLNSVFASALS
QNQSATVSKADTFKSGSSSRTSTTAVHDLLANRMQQTRDVSSLKNVETNETRRFSDGTAV
KRTVPSNETPQCSKKHKSANHAVPDSYNLQVAIIDRADLDGNIYPANWLVLEEKLLQEMI
SDRWCDEIISFDGTEWSGGVKVIKCANEKSLEFLKATVTGIGELWPRAQLDVIPQSHLPI
RSFISMWIPPPVPATRHVFELLGRQNKDLVTDNWQILSTIPCENGTTFRLAIDVISFRRL
QSCQGRVRFGFGFITIQPE
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atggatatggcctcatataaacgtcaaaaggtacccaaaagggaacaagcattcgatgaa
atacgtaggctggcctataagttcgtgggtaaatctgtaccagatgattttcaaaacatc
aaagaagaacatagcaataacgatgtcggaaaggaatcatttgaaaactctcgtttaaaa
atggagttacttaataaaaaggaatcgaatatttttaagaaaatctttgagaaacgccta
aaattggctgcagtgcagaagggctttgagtttctggaagcctataagatacatcaagta
ctactggtagtgggcagtaaaaaaagtggaaggagcacccaaataccgcagatacttttg
gatgagtatattttgaataacaaagcatcggagtgccgaattgcttgtgtacaaataatg
gcacacaaggtggaaaccatggccaaagaagtagcccatgagcgggacgaagttgtggga
aaatcagttggatatcaatcaaagaggggacatataccgccacgtgataacggttcaatt
ttgttttgcaccgctggtatgttatttcatagattcaaggacgatccgttcttgaagaaa
ttttcggccataatattggatgacatgcaagacagaacttttgaatacacgcaagtcatg
cggctgttgtccattatgttaccttttcgccgtgattttaaagtcattatgttagcctcc
catcagtgcaagcgaaaatttgcagagttttttaaacactacgacatcttcaacatagat
gaaggtgatgaggacaaagtcaacaacgactcaatattggaaaacgatttcaagtctcac
gatggccgagcaaataattcgcctaaagtgggatcaacaccatcatcggactatttggat
aactggaatttaaaaaacccacaggaacataagttttcatcagcagacatatctgccaca
atatcggatattctggcaagcaggcgttcaatgatggatgacaacaatgtcgatgacgac
aatgtcctggagggaaaatgcaagaaaatggaacatgaatatagatgttccatagaattt
ctttcattatatatagactctgatctccaaacgatatcagatttggatagggctttgatc
aatagtaatcgcaaaaatataatcaaattcgaaaggaggtatcctcatttggcggataaa
aaatccgtcttcattcttgaaaaaacagatctcaactctgtatttgcctcggcgttgtct
caaaaccaaagcgccactgtaagtaaagccgacacgttcaaaagcggctccagttcgcga
acatccacaacagcagttcatgatttgttagctaatcgtatgcagcaaacacgtgatgtg
agttcattaaaaaatgtagaaacaaacgaaacacgccgtttctccgacggcacagcagtt
aaaagaactgtaccttcaaatgaaaccccacagtgctcgaagaaacataaatctgcgaat
cacgctgttccagattcttataatcttcaagtagctatcatcgatagggcagatcttgat
ggtaatatctatcctgccaattggcttgtgctggaagagaagctgctccaggagatgata
tctgacagatggtgtgatgaaattatatcttttgatggcactgaatggtcaggcggagtg
aaagtcatcaaatgtgccaatgagaagtcattggagtttcttaaggctactgttaccggt
attggcgagctttggccgagagcacaactcgatgtgatacctcaatcacatttgcccata
cgatcattcatcagcatgtggataccgccccctgtacccgctaccagacatgttttcgaa
ttactgggtaggcaaaataaagatcttgtaacagataattggcaaatactttcgaccatt
ccctgtgaaaatggaacaacatttcgacttgccatcgatgtcatatcttttaggagatta
caatcttgtcaaggtcgtgtcagatttggttttggatttattaccattcagccagagtaa
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