Stomoxys calcitrans (stable fly): 106089445
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Entry
106089445 CDS
T07664
Name
(RefSeq) exosome complex component RRP4
KO
K03679
exosome complex component RRP4
Organism
scac
Stomoxys calcitrans (stable fly)
Pathway
scac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106089445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scac03019
]
106089445
Messenger RNA biogenesis [BR:
scac03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
106089445
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
106089445
BRITE hierarchy
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Ortholog
Paralog
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GFIT
Motif
Pfam:
RRP4_S1
KH_6
ECR1_N
ECR1_N_2
EXOSC1
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
106089445
NCBI-ProteinID:
XP_013110750
UniProt:
A0A1I8PLC8
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Position
4:complement(20597881..20598986)
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AA seq
298 aa
AA seq
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MTTNVNIRLALDRVNMGLLAQNQANAPRLYTPGEVVTAQQGFMKGHGTYVEGDDIKASVA
GVMEQVNKLVSIKPLKSRYVGEIGDVVVARITEVQQKRWKVNTNSRLDSVLLLSSVNLPG
GELRRRVAEDEQAMRKYLQEGDLISAEVQNIYDEGTLSLYTRSLKYGKLSQGVLVKVFPS
LVKRRKTHFHNLPCGASIILGNNGFIWISPSASGTGEVGDGGFSQNLSEVIPRADREVIA
RLRNCILALAHCKMMLYDTSISYAYEESMKYDVHELLQQEAIFDVAFLTQHRLRLQEE
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccaacgttaatatacgcctggctttggatcgcgtaaacatgggattgttggcc
caaaatcaggccaatgctccaagactgtatacacccggcgaagtggtcaccgcacagcaa
ggcttcatgaaaggccatggcacatatgtggagggtgatgatatcaaagcctctgtggcc
ggtgttatggaacaagtcaataaattggtctccattaaacctctcaaaagtcgttatgtt
ggcgaaattggtgatgtggttgtcgcacgcataaccgaagtgcaacaaaagcgttggaag
gttaacaccaactctagattggattcagtgctgttactctcctcagtgaatttgcctgga
ggcgagttgagaagacgtgtggctgaggatgagcaggccatgagaaaatatctacaagaa
ggtgatcttatatcggcagaggtgcaaaatatctacgacgagggtaccttatcgttgtat
actcgctccctgaagtatggcaaattgtcacaaggggtgttggtgaaggtgtttccctca
ttggtaaaacggcgaaagacacatttccataatttgccttgtggcgccagcattatattg
ggcaacaatggtttcatttggatatctccctctgcaagcggcactggcgaagttggtgat
ggtggtttctcccagaatttatccgaagtaatacctagagccgatcgtgaagttatagcc
cgtctaagaaactgcattttggcattggcccattgtaaaatgatgctgtatgacaccagt
atatcatatgcctatgaggagtccatgaaatatgatgtacacgaattgttacaacaagag
gccatatttgatgtggcatttttaacacagcatcgtttacgactgcaggaggagtaa
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