Stomoxys calcitrans (stable fly): 106089867
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Entry
106089867 CDS
T07664
Name
(RefSeq) leucine-rich repeat protein soc-2 homolog
KO
K19613
leucine-rich repeat protein SHOC2
Organism
scac
Stomoxys calcitrans (stable fly)
Pathway
scac04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
scac00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
106089867
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_14
LRR_1
LRR_LRWD1
LRR_13
LRR_NLRC4
LRR_5
LRR_At5g56370
Gly_rich_2
LRR_Zer-1
GP38
Motif
Other DBs
NCBI-GeneID:
106089867
NCBI-ProteinID:
XP_059218160
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Position
2:complement(45411621..45444343)
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AA seq
623 aa
AA seq
DB search
MNLCSSVGATASSTSLESDDLQQEITTACGGGGGGGGGSTSNSSAGGGGGGAVTTLTTHC
FGNLSAPTLHSAASSSSSSTHHHHHHQGNSSSNNNEMPPETRPKMVTVKHPESNKPKPTM
KKPKPIQADQDVLKALQRCRDEGIKRLDLSKSSITVIPPSVKDCVHLTELYLYSNKIGQL
PQEIGHLVNLKTLALNENSLTSLPDTLQHCKQLKVLDLRHNKLAEIPAVIYKLRSLTTLY
LRFNRITTVANDLRNLTNLTMLSLRENKIRVLGDCIGALVNLTTLDVSHNHLEHLPEDIG
NCVNLSALDLQHNELLDIPETIGNLKNLVRLGLRYNRLSSIPNALKNCKCMDEFNVEGNS
ITQLPDGLLASLSALTTITLSRNAFSSYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRA
KGLTKLNMKENVLTALPLDVGTWINMVELNLATNALQKLPDDIMNLQNLEILILSNNMLK
KIPNTIGQLRKLRILDLEENRIEVLPNEIGLLHELQKLILQTNQMSMLPRSIGHLTNLTH
LSVSENNLQFLPEEIGSLENLENLYINQNPCLEKLPYELALCTNLKYLNIDKCPLSTIPP
EIQGGGPSLVLQWLKMHSPYRQM
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgaacttgtgttcatcggtgggtgctacagcatcatcgacatcgttagaatcggacgat
ctacagcaagagataacaacagcctgcggcggcggcggaggtggtggcggtggtagcaca
tccaactcatcagccggcggcggaggtggcggagcggtaaccacccttaccacccattgt
tttggtaatttatcagcacccacattacattcagcagcatcatcgtcgtcatcatcgaca
catcatcaccatcatcatcaggggaacagtagttcgaacaacaacgaaatgccaccagaa
accagacccaaaatggtgactgttaagcacccagaatcgaataagcccaagccgacaatg
aaaaagcccaagcccatacaagcagatcaagatgttctcaaagcactgcagagatgtaga
gatgaaggtatcaaacgcttggatttaagcaaatcttctattaccgtcataccgcccagt
gtcaaggactgtgtacacttaacggaattgtatttgtatagtaataaaattggtcaattg
ccccaggagataggtcatttggtgaatttgaaaaccttggccctaaatgagaactcactg
acttcgctgcccgatacgttgcagcattgcaaacaactgaaggtgctggacttgagacat
aacaaactcgccgaaataccagcagtgatatacaaactacgctcccttaccacactgtat
ttgcgattcaatcgcattacaacagtggccaatgatctgcgtaacttgaccaatctgact
atgttgagtttgagagagaataaaatacgcgtgctgggcgattgcataggagctttggtc
aatctgaccaccttagatgttagtcataatcatttggaacacttgcccgaggacatcggc
aattgtgtcaacttaagtgctttggatttacaacataacgagctgctggacattcccgag
accataggcaatcttaagaatctggtgcgtctgggtttgcgctacaatcgcctgagttcc
ataccgaacgccttgaagaactgcaagtgtatggatgagttcaatgtggagggaaacagc
attacacaactgcctgatggtctgctggcttcgctgagtgctctgaccactatcactttg
tcacgcaatgccttcagcagttatcccactggaggtcctgcccagttcaccaacgtctat
agtattaacttggagcacaatcgcatcgataaaataccctatggcatattctcgcgggcc
aagggtctcaccaaactgaacatgaaggagaatgtactgacagccctgcccttggatgtg
ggcacttggatcaatatggtcgaactgaatttggccaccaatgctttgcaaaagctgccc
gatgacattatgaatttgcaaaatctcgaaatactgatactgtccaataatatgctcaaa
aagatacccaataccatagggcaattgcgtaaattacgcattctagatctggaggagaat
cgcattgaagtgttgccaaatgaaataggactgctgcatgaattgcaaaagctcatactg
cagacaaatcaaatgtccatgttgccgcgcagcataggccatctgacaaatttgacccat
ttgtcggtgagcgagaacaatctacaatttctacccgaggagattggctccctggagaac
ttggaaaatctctacatcaatcaaaatccctgtctggagaagttgccctatgagttggct
ttgtgtacaaatttgaaatatctcaacattgacaagtgtcccctgagcaccataccgccc
gagatacagggtggtggcccatcgctggtattacaatggctaaaaatgcattctccctat
aggcagatgtga
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