Stomoxys calcitrans (stable fly): 106091410
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Entry
106091410 CDS
T07664
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
scac
Stomoxys calcitrans (stable fly)
Pathway
scac03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
scac00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
106091410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scac03021
]
106091410
Enzymes [BR:
scac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
106091410
Transcription machinery [BR:
scac03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
106091410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
106091410
NCBI-ProteinID:
XP_013113377
UniProt:
A0A1I8PFK5
LinkDB
All DBs
Position
5:58369726..58380489
Genome browser
AA seq
1652 aa
AA seq
DB search
MGTTKTFDIDMFPSDLEFSVFTGDEIKRLSVVKIVTGLTFDPLGHPLPGGLYDSQMGTFG
KRMEPCATCLNMQACPGHMGHIELNALVYNPFFIKFVQKICNISCIHCSKLQIKQHVLDI
LSLQLHLIEAGYVVEAQELEMFKSEIVFNSAETRVKTERGDYLHPRLSEMFQLLSKGRSN
QVNVTKTSRAVRAAIVNAALQRPMSSKCQHCNENLKNVRYMHHKLVYYVSVAEMRSKFGD
KEGVPGQHKVILADECRKFLRQVYENYSEILKLFFPVLTLVGKSSEHGFSPIDIFFMDTI
PVTPPKARPSNILHDQIVEHSQTGLYRGIIENNSVIRVIMKHIKGEVFDMSEEAQNVFNG
AKGSNAYEKLYNAWQALQTSVNVLLDVSMSREAQNSSGLKQVLEKKEGLIRKHMMGKRVN
YAARTVITPDPNINVEEIGIPDIFARKLSYPVPVTPWNVAELRKMVMNGPDVHPGANYIQ
DERGYTTYIPANNASKRESMAKLLFNYPEKGIKIVHRHVLNGDILLLNRQPSLHRPSIMA
HKARILKGEKTFRLHYSNCKAYNADFDGDEMNAHLPQSEVARSEAYNLVNVASNYLVPKD
GTPLGGLIQDHVISGVKLSIRGRFFNREDYQQLVFQGLSHIKTNITLLPPAIIKPIQLWS
GKQILSTIIINLIPEGYPPITLNSVAKIASKHWNVYRGRVALAGGTKMGENEMSESQVII
RHGELLAGVLDKQQYGATTYGLIHCMYELYGGNISTCLLTAFTKVFTFFLQWEGFTLGVK
DILVTAEADEERRNIIRESRKIGNATLASALDMENVPALDVLSEKMEEAYIKDPKFRVIL
DRKYKSMLDNYTNDINKTCLPNGLITKFPDNNLQLMVMSGAKGSMVNTMQISCMLGQIEL
EGKRPPLMISGKSLPSFTSFETSPKSGGYIDGRFLTGIQPQDFFFHCMAGREGLIDTAVK
TSRSGYLQRCLIKHLEGLSVNYDLTVRDSDNCIVQFLYGEDGLDILKSKFFNTKFCTEFL
TQNAAVIVRPQEMETIRVEEEVNKVHRHNKKIRSWLKKHSSANTKHIAPFTHFSAELRNE
IEVNKANKLNTKTGRRRIDEAIIKLWRKADDDSKASYQKKYTRCPDPTSSVYRQDTTYSS
VSEKVEKIIADYVARHPDRKSAVTDVMYVKNAKALAAPGEPVGLLAAQSIGEPSTQMTLN
TFHFAGRGEMNVTLGIPRLREILMMASANIKTPSMDIPIKPNQEEMAEKLRLTLNRVTLS
DVLQYVTVKTQLVHTPTRVQRYELTFQFLPRQAYAEDFSVKPKQIIQFLSNKFFSVLFRS
IIKSSTSKTAVIEMGETQNKDGSQDENIDAGEDISKAPKETSADNDDSSDDEQGDADNDA
TGVKLKSKKMDENEYDDPEEAEEIVDANDDENEDDSVEAPADETHDSEEESSNKPDNLTE
KVLLNSMVENYVYDKKRYLWAKLTFNLEMRHRQPNISTIIRDLAGKSVVHQVENIKRAII
YKGNNGELTLKTDGINIVEMFKHNKVLDINRFYSNDIHAIARTYGIEAAARVIVQEVTNV
FKVYGITVDRRHLSLIADYMTFDGTFQPLSRKGMEHSASPLQQMSFESCLQFLKNAAGTG
CADELCSPSSRLMVGLPVRNGTGAFELLTKIC
NT seq
4959 nt
NT seq
+upstream
nt +downstream
nt
atggggacaacgaaaacttttgatattgacatgtttccatcagacctggagttctcagtt
ttcactggcgatgaaatcaaacggctaagtgttgttaaaattgtcacgggtctcacattt
gatccgctgggacatccactgcccggtggtctgtatgacagccaaatgggtacattcggc
aagcgcatggaaccatgtgccacctgcctgaatatgcaagcttgtcccggccacatgggc
cacatcgaattgaatgctcttgtttataatccatttttcattaaatttgttcaaaagata
tgcaacatttcgtgtatacattgctctaaactgcaaattaaacagcatgtcttggatata
ttgtcattgcaattgcatctcattgaagcgggctatgtagttgaagctcaagaactggaa
atgtttaaatcggaaattgtttttaatagtgcagagacgcgcgtaaaaactgagaggggg
gactatttgcacccccgcctatcggaaatgtttcagctcttatccaaaggccgcagtaat
caggtgaatgtaacaaagacttctcgtgcagtacgggctgccattgtaaatgctgcatta
cagcgtcccatgtctagtaaatgtcaacattgcaacgaaaacttaaaaaacgtccgttat
atgcaccataagcttgtctattatgttagtgtggcggaaatgagaagcaagttcggcgac
aaggaaggtgtacctggacaacacaaagttatattggctgatgaatgtcgaaagtttctg
cgtcaggtttatgaaaactattctgaaattttgaaactttttttcccggtactaacattg
gtgggcaaatccagcgaacatggtttcagtccaattgatatatttttcatggatacaata
ccggtgactccgcccaaagctcgtccctcaaatattttgcacgatcaaattgtagagcac
tcccaaactggtctttatcgaggaatcatcgaaaataactccgtgataagagtaataatg
aaacatatcaaaggagaagtgttcgatatgtccgaagaagcacagaacgtttttaatggt
gcaaaaggttcaaatgcttatgaaaaactttataatgcttggcaagctttgcagacgtca
gtcaatgttttacttgatgtaagcatgtcgcgggaggctcaaaactcatctggtctgaag
caggttttggaaaaaaaggaaggtcttatacgcaaacatatgatgggcaaacgtgttaac
tatgctgctcgtactgtcataacaccagaccccaacataaatgtagaagaaattggcatt
ccagatatatttgcgcgcaaattatcgtatccagtgcctgtgacaccatggaatgtggcg
gaactacgtaaaatggtgatgaatgggccggatgttcatcccggagcgaattatattcaa
gacgaaaggggatataccacatatattccagctaataatgcatctaaaagagaaagtatg
gcaaaattattgtttaactatcccgaaaagggcataaaaattgtacaccgacatgtattg
aatggagacattttgcttttgaatcgccaaccctcgcttcacaggccatcaattatggcc
cacaaagcacgtattttgaagggtgaaaagacctttcgtttgcactattccaattgtaag
gcatacaatgctgattttgacggtgacgaaatgaatgcccatcttcctcagagcgaagtt
gcaagatccgaggcctacaatctggtcaatgtggccagtaactatttagttcccaaggat
ggtacaccattgggtggccttattcaagatcacgttatatcaggcgtaaaactttcaata
cgtggccgctttttcaatcgcgaagattatcaacagcttgtgtttcagggactatctcac
attaaaacaaatattactttattaccaccggctataattaagcccatacaattgtggtct
ggaaaacagatattgtcaaccataataatcaatcttatacctgagggatatccacctatt
acactgaattcagtagcgaaaattgcttcaaagcattggaacgtttatagaggacgcgtt
gccctagctggaggcacaaagatgggtgaaaatgaaatgtctgagagtcaggtaataatt
cgtcatggtgaacttttggcaggtgtcttggacaaacagcagtacggtgccaccacgtat
ggtctcatacattgcatgtacgagctatacggtggcaacatatcgacgtgcttgctaacc
gcatttacaaaggtcttcacatttttcctgcaatgggaaggatttacactgggcgtaaag
gacattctggttacggccgaagccgacgaagaaaggcgcaatataattcgagaaagtcgt
aaaattggtaatgctactttggcatctgccttggatatggagaatgttcccgccttagat
gtgctgtcggagaaaatggaagaagcttacatcaaagatcccaagtttcgagttatccta
gatcgtaaatacaagtcaatgttggataattacacaaatgatatcaacaaaacatgttta
cctaatggtttgatcacaaaattccccgacaataatctacagctaatggttatgtcgggt
gctaagggttccatggtcaacactatgcaaatttcctgtatgttgggtcaaattgaattg
gaaggtaaacgcccacctcttatgatatcgggcaaatccttacccagcttcacttctttc
gaaacttcgcccaaatcaggaggatatattgatggtcgatttttaacgggaatacaaccg
caagatttctttttccattgcatggctggtcgtgagggccttattgataccgctgtgaaa
acttctcgctcgggttatctgcaacgttgcctaataaaacatttggaaggattatcggta
aactatgacttgacagtgcgtgacagtgacaattgcattgttcaatttctctatggcgag
gatggtctggatattttaaaatcaaagttcttcaataccaaattctgcacagaatttcta
actcaaaatgccgcagtaatagttcgtcctcaagaaatggaaacaataagggttgaggaa
gaagtcaataaagtacatcgccacaataagaaaattcgctcttggctgaaaaaacatagc
agtgcaaacaccaaacatattgccccttttacccacttctcagccgagctgcgcaacgaa
atcgaggttaataaagccaataagcttaacacaaagaccggaagacgccgcatagatgaa
gctatcatcaaattatggcgaaaagccgatgatgatagtaaagcctcgtatcaaaagaaa
tatacccgttgtccagatcccactagttcagtttatcgacaggacacgacctacagttct
gtttcggagaaagtggaaaaaattattgccgattacgtagccagacaccccgaccggaaa
tccgctgttaccgatgtgatgtacgtgaaaaacgccaaagccttagcggccccaggtgaa
ccggttggtcttcttgctgcccaatcgattggcgagccttccactcagatgacactgaat
acttttcactttgccggtcgcggtgaaatgaacgtgaccctgggtataccacgtcttcgc
gaaatccttatgatggcttcggctaacattaaaaccccttcaatggatatacccatcaaa
ccaaatcaggaagagatggcagaaaaactacgtctcacgctaaatagagtgacattgagc
gatgtattgcaatatgttactgttaaaacgcaattggttcacacacccacaagagtacaa
agatatgagttaaccttccagtttttaccccgacaagcttatgccgaagatttcagtgtc
aaaccaaagcagattatacagtttttgagcaataaattcttttctgtgttgttccgctcg
atcataaaatcatccacatcaaagacagcagttattgaaatgggtgaaacgcaaaacaaa
gatggctctcaagacgaaaacatagatgctggcgaagatatttcgaaggcgccaaaagaa
acgtctgctgataatgacgactcttctgacgatgagcagggagatgcagataatgatgca
accggagttaaactgaaatcaaagaagatggacgagaacgaatatgacgacccagaggag
gcagaagaaattgttgatgcaaatgatgatgagaatgaggatgatagcgttgaagctcca
gcagatgagacacacgactctgaggaggagtcctctaataaaccagataatcttacggag
aaggtcttgctcaactccatggttgagaactatgtgtatgataagaaacgttatttgtgg
gccaaattaacatttaatttagaaatgagacaccgacagccaaatatatctacaataatc
cgggatttggcgggaaaatcagtggtacatcaagtggaaaatataaaacgtgccattata
tataagggcaacaatggcgagttgactcttaagactgatggcattaacattgtagaaatg
tttaaacacaacaaagtgcttgacataaatcgtttttactctaacgacatacacgctatt
gcacgaacatacggaattgaagcagcagctcgagtcattgtgcaggaagtaacgaatgtc
ttcaaagtttatggtattacggtagaccgccgtcatttgtcgcttattgctgattacatg
acatttgatggtactttccaacccctgtctcgcaaaggaatggaacactctgcctcgcct
ttgcagcaaatgtcctttgaatcttgtctccagttcctgaagaatgctgctggtacaggt
tgtgccgatgagttatgttcaccctcaagtcgtttaatggtaggccttccagtacgaaat
ggcacaggtgcctttgaattgctgacaaaaatatgttaa
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integrated database retrieval system
