Stomoxys calcitrans (stable fly): 106091600
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Entry
106091600 CDS
T07664
Name
(RefSeq) DNA repair protein RAD50
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
scac
Stomoxys calcitrans (stable fly)
Pathway
scac03440
Homologous recombination
scac03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
scac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
106091600
03450 Non-homologous end-joining
106091600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scac03032
]
106091600
03400 DNA repair and recombination proteins [BR:
scac03400
]
106091600
DNA replication proteins [BR:
scac03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
106091600
DNA repair and recombination proteins [BR:
scac03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
106091600
BRCA1-C complex
106091600
NHEJ (non-homologous end-joining)
MRX complex
106091600
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
Rad50_zn_hook
AAA_21
AAA_29
AAA_22
AAA_16
YdjO
ABC_tran
DUF1843
Motif
Other DBs
NCBI-GeneID:
106091600
NCBI-ProteinID:
XP_013113614
UniProt:
A0A1I8P2K6
LinkDB
All DBs
Position
Unknown
AA seq
1313 aa
AA seq
DB search
MSTIERLSIQGIRSFGGNAGDNQMISFTSPVTLILGENGCGKTTVIECLKYALTGECPPG
SDRGKNFVHDPKIFNLTDVLGQIKLEVRNVQGARLSICRSMKLGMRRGKITFETLDATLN
YLNDDGDGKKAIDSISKRCADVDLVMSQFMGVSKAIINNVLLCHQEDSSWPLDEPKKLKE
KFDAIFGISEYNKALERIIKMRKEEMDILKIKEADLRLEQHLKVEMEDKTMSLQKCQEKA
KSIEEQCKQCEEEMAPIEERLQQIHKIEAEVGKYQAQKVELQTKQKNCQDQMNNLKKKIK
TMFEGTLEELDSEIGNFGQKMTEKRTERREMEGKLNSVKKEEKSLQNRHNDVDKKRVVAI
QQKQKEDDAKKKRADKLKAIGQQMNITIPEDLGDTTEEVAKILEEIKGVLATEQGKINET
ISQHDAEDQEIQTKIDQLRVEVAKLQESVGNLTKQKKAYEKESEQTEKKILEIEKSTQQL
KVVSAKLKETEDCYEETSSKFNQEELRENIKKDKEAIKKLDADFRSVDERLTFLNSISKL
VAELNLKEQELENREQEVRKVKSKHSGNFRKIFEEGKVVESNFQRHVKVTYEKSRRHIKE
LNNKINGLKLKEQRFEIKRKTLKDELQKAEKELEDCKETIFEKCRSTPYEELLTRSKTLL
SKHQLELGAQKSAEAFYKQYLQKIEDEPYCPLCQKDMTTSEASGLTSELNDKIVDLPQNI
DRLEKLIKEEQKKHDALLQLKPVIDKVAKLEQDIPKRKEDMKKLQDDLAECSKEIEGIQA
QLADPTANMDLANSMMGDMSLLDEAIKQVTKSKDDIAKLKNKFPKEKDSENENTSIDEVQ
AQKTAISTELEEKRKTLEQNQQYYEKNMDALNKLRDLKNTLKDQQVKLQEGIQNLPQLQE
RQTELSQLLVALVTEMQDNQGKVGPIKSQLSATIKEKSQQKDSNRVKVNQMLMKLDTFKR
MDQDVQRLHAEVLDYEKLTLDHKLKTFEESLKISKEELQKLADNIAEMTTKVEGIKQELA
NQESADRDLKDNRDLKILQQKSEDLKVKYDALIEELGKLDFSNVSKEKKELTSKRDKITV
RKGELLGQSGEVKHQIRKLEKELASPKYRNSLMNYRRIYYEVEVTRKMVNDLGQHRVALE
WALMQFHTEKMREINRLIREYWRLIYRGNDIDYIQIQTEEGKDASSLDKRRNYNYRVIQS
KNNSEIEMRGRCSAGQRVLASLIIRMALAETFSSNCGVLALDEPTTNLDRNNILSLCDAL
NRIVEERQTQSNFMLIIITHDEAFISTLGKVNSYNRVFRNDECKSVIRRVKVA
NT seq
3942 nt
NT seq
+upstream
nt +downstream
nt
atgtctacaattgaacgtctatctattcagggcataagaagttttggcggaaatgctgga
gataatcagatgataagtttcacctcaccggttaccttaatattgggtgaaaatggttgt
ggtaaaactaccgtcatcgagtgcctgaagtatgcactcaccggcgaatgcccacccggc
agtgaccgtggcaagaattttgttcatgacccgaaaatcttcaatttaactgatgttttg
ggtcaaatcaaattggaagtgcgcaatgttcagggtgctcgtttgtccatttgtcgttcc
atgaaattgggcatgcgacgtggtaaaattacctttgagacactagatgctactttgaat
tacttaaatgatgatggggatggcaaaaaggcaattgattccatatcaaaacgttgtgcc
gatgtggatttagttatgtcccagttcatgggtgtctcaaaggccattattaacaatgtg
ctgctttgccaccaggaagactctagttggcccttggatgaacccaaaaagttgaaggag
aaattcgatgcaatttttggaatttcggagtataataaagctttggaacgaattattaag
atgcgtaaagaggaaatggacatactcaaaatcaaagaggccgatttacgtttggagcag
catcttaaagttgaaatggaagacaaaactatgagtttacaaaaatgccaagagaaggcc
aaatccatagaggaacagtgtaagcaatgtgaggaggaaatggctcccattgaagaacgc
ctacagcaaattcataaaattgaagctgaagtgggaaaatatcaggcgcagaaggttgaa
ttgcaaaccaagcagaaaaattgtcaagatcaaatgaataatttgaaaaagaaaattaaa
accatgtttgaaggcactctggaagagctggactctgaaattggcaatttcggtcagaaa
atgacagaaaaacgtactgaacgtcgtgaaatggagggaaaactcaactccgttaaaaag
gaagagaagagtttgcagaatcgccacaatgatgttgataagaaacgtgtcgttgccata
cagcaaaagcaaaaagaagacgatgctaagaagaaacgagctgataagttaaaagcaata
ggtcaacaaatgaatattaccatacctgaagacttgggtgataccacagaagaggttgca
aaaattttggaagagattaagggagtactggccacagaacaaggcaaaatcaatgaaact
attagccagcacgatgccgaggaccaggaaattcaaactaaaatcgatcaattgcgtgtt
gaagtagccaaattgcaagaatccgttggaaacttgaccaagcaaaagaaagcctatgag
aaagagtccgagcaaactgaaaagaaaattttagagattgagaagtccacgcaacaactg
aaagttgtttcggccaaattgaaggagactgaggattgctacgaagagacttcatcgaaa
ttcaatcaggaagagctgcgcgaaaatattaaaaaagacaaagaagccatcaagaagttg
gacgccgattttcgttcagtcgatgaacgcttgacatttttgaattcgatttcaaaactt
gtggccgagttaaatttaaaggaacaagagttggagaatcgcgagcaggaggttagaaaa
gtcaaaagtaagcacagtggtaatttccgcaaaatcttcgaggagggcaaagttgttgag
agcaatttccaacgtcacgtgaaggttacctatgagaaatctcgccgtcatattaaggaa
ctcaataataagattaatggcctaaaattgaaggagcaacgtttcgaaattaaacgcaaa
actcttaaggacgaattgcaaaaggccgaaaaggaattggaggattgcaaggagaccatc
tttgagaaatgtcgttccacaccatacgaagagctgctgaccagatccaagacattgctc
agcaaacatcaattggaacttggcgctcaaaagtcagctgaggcgttctacaagcagtat
ttgcaaaagattgaggatgaaccatactgtcctttgtgtcaaaaggatatgacaactagt
gaggcttcaggcttaacttccgaattgaacgacaagattgtagatcttccacaaaacatc
gacagacttgaaaaactcatcaaagaagagcaaaagaaacatgacgccctattgcaactg
aaaccggtcattgacaaagttgccaaactggagcaagatattccaaaaaggaaggaggat
atgaaaaaattgcaagatgacttggcagaatgcagcaaagaaatcgaaggcatccaagct
caattagccgatccaacagcaaatatggatctggccaactccatgatgggcgatatgtct
cttctcgatgaggccattaaacaggttacaaaatccaaggatgacatagcaaagttgaaa
aataaatttcctaaagagaaggattctgaaaatgagaatacctcaatcgatgaggtgcaa
gctcagaaaactgctatttcaacggaattggaagaaaagcgtaaaacactcgaacaaaat
caacagtactatgagaagaacatggatgctttgaataaattaagggatttgaaaaatact
ctaaaggaccaacaggttaaattacaagaaggaatacagaatctacctcaactacaagaa
cgtcaaactgaactcagccaattattggtggcccttgttaccgagatgcaggacaatcag
ggcaaagttggtcctattaaatcgcaactaagtgcgaccatcaaggaaaaaagtcaacag
aaggattcgaaccgtgttaaagtcaaccaaatgcttatgaagttggatacattcaagcgc
atggatcaggatgtacaaagactacatgcggaagttttggactatgaaaaattaactttg
gatcacaaattgaaaacatttgaggaatcattgaaaatcagcaaggaggaattgcaaaaa
ttggccgataacattgctgagatgacaactaaggtggagggtataaaacaagagttagcc
aaccaagaatctgctgatcgtgatctgaaagacaatcgtgatttgaaaattttacaacaa
aaatccgaagacttgaaagtaaaatacgatgcattaatcgaagaattgggcaaattagat
ttctccaatgtatcgaaggagaagaaagaattaacctccaagcgcgataagattaccgta
cggaaaggagaactgctgggacagagtggcgaagttaagcatcaaatacgcaaactggaa
aaggaattggcgtcacccaagtatcgtaactcgctgatgaactaccggcgcatttactac
gaggtagaagtaacccgcaaaatggtgaatgatttaggccaacatcgtgtggcacttgaa
tgggctctaatgcaattccacactgagaaaatgcgcgaaattaaccgtttgatacgcgaa
tattggcgtctcatctatcgcggcaatgatatcgattacatacaaattcaaacggaggaa
ggcaaagatgcttcatctttggataaacgtcgtaattacaactatcgcgtcatacaatcg
aaaaataattcagaaatcgagatgcgtggacgctgcagtgccggtcaacgggtattagct
tcccttatcatacgcatggccctggccgaaaccttcagtagcaattgtggtgttctagcc
ttggatgagcccaccaccaatttggatcgtaacaatatattatcgctgtgcgatgcactc
aatcgtattgtggaggagaggcaaacacaatccaacttcatgttaattatcattacccac
gatgaagcattcatttcgactttgggtaaggttaatagctataatcgtgtattccgcaat
gatgaatgtaaatccgttatacgtcgtgtaaaagttgcctaa
DBGET
integrated database retrieval system