KEGG   Stomoxys calcitrans (stable fly): 106091600
Entry
106091600         CDS       T07664                                 
Name
(RefSeq) DNA repair protein RAD50
  KO
K10866  DNA repair protein RAD50 [EC:3.6.-.-]
Organism
scac  Stomoxys calcitrans (stable fly)
Pathway
scac03440  Homologous recombination
scac03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:scac00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    106091600
   03450 Non-homologous end-joining
    106091600
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:scac03032]
    106091600
   03400 DNA repair and recombination proteins [BR:scac03400]
    106091600
DNA replication proteins [BR:scac03032]
 Eukaryotic type
  DNA Replication Termination Factors
   MRN complex
    106091600
DNA repair and recombination proteins [BR:scac03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    MRN(MRX) complex
     106091600
    BRCA1-C complex
     106091600
   NHEJ (non-homologous end-joining)
    MRX complex
     106091600
SSDB
Motif
Pfam: AAA_23 SMC_N SbcC_Walker_B Rad50_zn_hook AAA_21 AAA_29 AAA_22 AAA_16 YdjO ABC_tran DUF1843
Other DBs
NCBI-GeneID: 106091600
NCBI-ProteinID: XP_013113614
UniProt: A0A1I8P2K6
LinkDB
Position
Unknown
AA seq 1313 aa
MSTIERLSIQGIRSFGGNAGDNQMISFTSPVTLILGENGCGKTTVIECLKYALTGECPPG
SDRGKNFVHDPKIFNLTDVLGQIKLEVRNVQGARLSICRSMKLGMRRGKITFETLDATLN
YLNDDGDGKKAIDSISKRCADVDLVMSQFMGVSKAIINNVLLCHQEDSSWPLDEPKKLKE
KFDAIFGISEYNKALERIIKMRKEEMDILKIKEADLRLEQHLKVEMEDKTMSLQKCQEKA
KSIEEQCKQCEEEMAPIEERLQQIHKIEAEVGKYQAQKVELQTKQKNCQDQMNNLKKKIK
TMFEGTLEELDSEIGNFGQKMTEKRTERREMEGKLNSVKKEEKSLQNRHNDVDKKRVVAI
QQKQKEDDAKKKRADKLKAIGQQMNITIPEDLGDTTEEVAKILEEIKGVLATEQGKINET
ISQHDAEDQEIQTKIDQLRVEVAKLQESVGNLTKQKKAYEKESEQTEKKILEIEKSTQQL
KVVSAKLKETEDCYEETSSKFNQEELRENIKKDKEAIKKLDADFRSVDERLTFLNSISKL
VAELNLKEQELENREQEVRKVKSKHSGNFRKIFEEGKVVESNFQRHVKVTYEKSRRHIKE
LNNKINGLKLKEQRFEIKRKTLKDELQKAEKELEDCKETIFEKCRSTPYEELLTRSKTLL
SKHQLELGAQKSAEAFYKQYLQKIEDEPYCPLCQKDMTTSEASGLTSELNDKIVDLPQNI
DRLEKLIKEEQKKHDALLQLKPVIDKVAKLEQDIPKRKEDMKKLQDDLAECSKEIEGIQA
QLADPTANMDLANSMMGDMSLLDEAIKQVTKSKDDIAKLKNKFPKEKDSENENTSIDEVQ
AQKTAISTELEEKRKTLEQNQQYYEKNMDALNKLRDLKNTLKDQQVKLQEGIQNLPQLQE
RQTELSQLLVALVTEMQDNQGKVGPIKSQLSATIKEKSQQKDSNRVKVNQMLMKLDTFKR
MDQDVQRLHAEVLDYEKLTLDHKLKTFEESLKISKEELQKLADNIAEMTTKVEGIKQELA
NQESADRDLKDNRDLKILQQKSEDLKVKYDALIEELGKLDFSNVSKEKKELTSKRDKITV
RKGELLGQSGEVKHQIRKLEKELASPKYRNSLMNYRRIYYEVEVTRKMVNDLGQHRVALE
WALMQFHTEKMREINRLIREYWRLIYRGNDIDYIQIQTEEGKDASSLDKRRNYNYRVIQS
KNNSEIEMRGRCSAGQRVLASLIIRMALAETFSSNCGVLALDEPTTNLDRNNILSLCDAL
NRIVEERQTQSNFMLIIITHDEAFISTLGKVNSYNRVFRNDECKSVIRRVKVA
NT seq 3942 nt   +upstreamnt  +downstreamnt
atgtctacaattgaacgtctatctattcagggcataagaagttttggcggaaatgctgga
gataatcagatgataagtttcacctcaccggttaccttaatattgggtgaaaatggttgt
ggtaaaactaccgtcatcgagtgcctgaagtatgcactcaccggcgaatgcccacccggc
agtgaccgtggcaagaattttgttcatgacccgaaaatcttcaatttaactgatgttttg
ggtcaaatcaaattggaagtgcgcaatgttcagggtgctcgtttgtccatttgtcgttcc
atgaaattgggcatgcgacgtggtaaaattacctttgagacactagatgctactttgaat
tacttaaatgatgatggggatggcaaaaaggcaattgattccatatcaaaacgttgtgcc
gatgtggatttagttatgtcccagttcatgggtgtctcaaaggccattattaacaatgtg
ctgctttgccaccaggaagactctagttggcccttggatgaacccaaaaagttgaaggag
aaattcgatgcaatttttggaatttcggagtataataaagctttggaacgaattattaag
atgcgtaaagaggaaatggacatactcaaaatcaaagaggccgatttacgtttggagcag
catcttaaagttgaaatggaagacaaaactatgagtttacaaaaatgccaagagaaggcc
aaatccatagaggaacagtgtaagcaatgtgaggaggaaatggctcccattgaagaacgc
ctacagcaaattcataaaattgaagctgaagtgggaaaatatcaggcgcagaaggttgaa
ttgcaaaccaagcagaaaaattgtcaagatcaaatgaataatttgaaaaagaaaattaaa
accatgtttgaaggcactctggaagagctggactctgaaattggcaatttcggtcagaaa
atgacagaaaaacgtactgaacgtcgtgaaatggagggaaaactcaactccgttaaaaag
gaagagaagagtttgcagaatcgccacaatgatgttgataagaaacgtgtcgttgccata
cagcaaaagcaaaaagaagacgatgctaagaagaaacgagctgataagttaaaagcaata
ggtcaacaaatgaatattaccatacctgaagacttgggtgataccacagaagaggttgca
aaaattttggaagagattaagggagtactggccacagaacaaggcaaaatcaatgaaact
attagccagcacgatgccgaggaccaggaaattcaaactaaaatcgatcaattgcgtgtt
gaagtagccaaattgcaagaatccgttggaaacttgaccaagcaaaagaaagcctatgag
aaagagtccgagcaaactgaaaagaaaattttagagattgagaagtccacgcaacaactg
aaagttgtttcggccaaattgaaggagactgaggattgctacgaagagacttcatcgaaa
ttcaatcaggaagagctgcgcgaaaatattaaaaaagacaaagaagccatcaagaagttg
gacgccgattttcgttcagtcgatgaacgcttgacatttttgaattcgatttcaaaactt
gtggccgagttaaatttaaaggaacaagagttggagaatcgcgagcaggaggttagaaaa
gtcaaaagtaagcacagtggtaatttccgcaaaatcttcgaggagggcaaagttgttgag
agcaatttccaacgtcacgtgaaggttacctatgagaaatctcgccgtcatattaaggaa
ctcaataataagattaatggcctaaaattgaaggagcaacgtttcgaaattaaacgcaaa
actcttaaggacgaattgcaaaaggccgaaaaggaattggaggattgcaaggagaccatc
tttgagaaatgtcgttccacaccatacgaagagctgctgaccagatccaagacattgctc
agcaaacatcaattggaacttggcgctcaaaagtcagctgaggcgttctacaagcagtat
ttgcaaaagattgaggatgaaccatactgtcctttgtgtcaaaaggatatgacaactagt
gaggcttcaggcttaacttccgaattgaacgacaagattgtagatcttccacaaaacatc
gacagacttgaaaaactcatcaaagaagagcaaaagaaacatgacgccctattgcaactg
aaaccggtcattgacaaagttgccaaactggagcaagatattccaaaaaggaaggaggat
atgaaaaaattgcaagatgacttggcagaatgcagcaaagaaatcgaaggcatccaagct
caattagccgatccaacagcaaatatggatctggccaactccatgatgggcgatatgtct
cttctcgatgaggccattaaacaggttacaaaatccaaggatgacatagcaaagttgaaa
aataaatttcctaaagagaaggattctgaaaatgagaatacctcaatcgatgaggtgcaa
gctcagaaaactgctatttcaacggaattggaagaaaagcgtaaaacactcgaacaaaat
caacagtactatgagaagaacatggatgctttgaataaattaagggatttgaaaaatact
ctaaaggaccaacaggttaaattacaagaaggaatacagaatctacctcaactacaagaa
cgtcaaactgaactcagccaattattggtggcccttgttaccgagatgcaggacaatcag
ggcaaagttggtcctattaaatcgcaactaagtgcgaccatcaaggaaaaaagtcaacag
aaggattcgaaccgtgttaaagtcaaccaaatgcttatgaagttggatacattcaagcgc
atggatcaggatgtacaaagactacatgcggaagttttggactatgaaaaattaactttg
gatcacaaattgaaaacatttgaggaatcattgaaaatcagcaaggaggaattgcaaaaa
ttggccgataacattgctgagatgacaactaaggtggagggtataaaacaagagttagcc
aaccaagaatctgctgatcgtgatctgaaagacaatcgtgatttgaaaattttacaacaa
aaatccgaagacttgaaagtaaaatacgatgcattaatcgaagaattgggcaaattagat
ttctccaatgtatcgaaggagaagaaagaattaacctccaagcgcgataagattaccgta
cggaaaggagaactgctgggacagagtggcgaagttaagcatcaaatacgcaaactggaa
aaggaattggcgtcacccaagtatcgtaactcgctgatgaactaccggcgcatttactac
gaggtagaagtaacccgcaaaatggtgaatgatttaggccaacatcgtgtggcacttgaa
tgggctctaatgcaattccacactgagaaaatgcgcgaaattaaccgtttgatacgcgaa
tattggcgtctcatctatcgcggcaatgatatcgattacatacaaattcaaacggaggaa
ggcaaagatgcttcatctttggataaacgtcgtaattacaactatcgcgtcatacaatcg
aaaaataattcagaaatcgagatgcgtggacgctgcagtgccggtcaacgggtattagct
tcccttatcatacgcatggccctggccgaaaccttcagtagcaattgtggtgttctagcc
ttggatgagcccaccaccaatttggatcgtaacaatatattatcgctgtgcgatgcactc
aatcgtattgtggaggagaggcaaacacaatccaacttcatgttaattatcattacccac
gatgaagcattcatttcgactttgggtaaggttaatagctataatcgtgtattccgcaat
gatgaatgtaaatccgttatacgtcgtgtaaaagttgcctaa

DBGET integrated database retrieval system