Stomoxys calcitrans (stable fly): 106091986
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Entry
106091986 CDS
T07664
Name
(RefSeq) probable ATP-dependent RNA helicase DDX23
KO
K12858
ATP-dependent RNA helicase DDX23/PRP28 [EC:
5.6.2.7
]
Organism
scac
Stomoxys calcitrans (stable fly)
Pathway
scac03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
scac00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106091986
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
scac03041
]
106091986
Enzymes [BR:
scac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106091986
Spliceosome [BR:
scac03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
106091986
Complex C
U5 SnRNP specific factors
106091986
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
CMS1
Motif
Other DBs
NCBI-GeneID:
106091986
NCBI-ProteinID:
XP_013114168
UniProt:
A0A1I8PDY2
LinkDB
All DBs
Position
Unknown
AA seq
791 aa
AA seq
DB search
MGNERKRRSRSRERDRERDRNRDNRSGQGGRGKSSERSLNRERNRERSRSRDRQRDYESS
RIKDKKREESRSNKPTKDVIIIEDDELTEDHRKEKPKKLEPLSLEELLEKKKKEEEARSK
PVFLTKEQRAAEALKRRQEEVAAMRAGQSAGTKASTSTSTGVSVPSSSNTVDNSFSISAR
RSDGRNERNAGRERDRDRDRDRESRRADDLSQKDKEKELEAIRERYLGIIKKKRRVRRLN
DRKFVFDWDAAEDTSVDYNNLYKERHHVQFYGRGNVAGIDIKEQKRTQSQFYGDLLEKRR
TEAEKEQEKVRLIKVKRKEEKQKWDDRHWSEKDNDEMTERDWRIFREDYNITIKGGKIPN
PIRSWKESGFPKEILDIIDGVGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLIP
LLSWIQSLPKIERLEDVDQGPYAIIMAPTRELAQQIEEETVKFGQPLGIRTVVVVGGLSR
EEQGFRLRMGCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILE
YMPVTNLKPDSEEAEDANKLMENFYSKKKYRQTVMFTATMPPAVERLARSYLRRPATVYI
GSVGKPTERTEQIVYMMGENDKRKKLIEILKRGIDPPVIIFVNQKKGADVLAKGLEKLGY
NSCTLHGGKGQEQREYALASLKSGSKDILVATDVAGRGIDIKDVSLVINYDMAKTIEDYT
HRIGRTGRAGKNGVAISFVTKDDSALFYDLKQVVMASPVSVCPPELMNHPDAQHKPGTVV
TKKRREEKIFA
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgggtaatgaaaggaaacgtcgctcccgttcacgtgaaagggatcgtgaacgtgaccgc
aatcgtgataatcggagcggtcaaggaggtcgaggtaaatcatcagaacgttcattgaat
cgggaaaggaatcgcgaaaggtctagatctagagatcgtcaaagagactacgaatcatct
cgaattaaggataagaaacgtgaggagagtaggagcaataagcctacaaaggatgtaatt
ataatagaggatgatgaacttactgaagatcatagaaaagagaagcctaaaaaattggaa
cccttgtcattggaagagcttttggaaaagaagaaaaaggaggaggaggcacgtagcaag
ccagtgtttttgactaaggaacagcgggctgcagaagctcttaaacgcagacaagaagaa
gtggccgccatgagagcaggtcagtctgctggtaccaaagcaagtacatcaacatcaact
ggtgttagtgtaccatctagcagcaacacagttgataacagctttagcatttcggctcga
cgttcagatggaaggaacgagcgtaatgctgggcgtgaaagagatcgtgatcgtgacagg
gatcgggaatccagaagggcagatgatctttcgcaaaaagacaaagaaaaggaattggaa
gccataagagaacgttacttgggaattattaaaaagaagagaagagttaggcgattgaat
gatcgtaaatttgtttttgattgggatgccgcagaggacacatcagtggactacaataat
ttgtataaggagcggcatcacgttcagttttatggccgtggaaacgttgctggcattgac
atcaaagaacaaaagagaacgcaaagtcaattttatggcgatctattggaaaagcgacgc
acagaagccgaaaaagaacaggaaaaagtgcgtttgattaaagtgaaaagaaaagaagag
aaacaaaaatgggatgaccgtcattggtcggagaaggacaacgatgaaatgacagaacga
gactggcgtattttccgagaagattacaacataaccattaaaggtggcaaaattcccaat
cccatacgtagttggaaagagtctggttttcccaaagaaattcttgacattattgacggg
gtcggctacaaagaaccaacaccaattcaaagacaggctataccaattggtctacagaat
cgagatattatcggcgtggcagaaacaggttccggtaaaaccctggcattcctcataccc
cttttatcctggattcaatcgctgccaaaaatcgaacgccttgaagatgtagatcaaggc
ccatacgctatcattatggctcccactcgcgaattggcccagcaaattgaggaggaaacc
gtcaaatttggtcaacccttaggaatacgaactgttgttgtggtcggtggtctatctcgc
gaggaacaaggttttcgcttgcgtatgggttgcgaaattgtaattgctacccctggtcgt
ttaattgatgttctggaaaatcgctatttggtattgaaccagtgtacatacattgtactc
gacgaagcagatcgtatgattgacatgggttttgaaccagatgtacaaaaaatcttggaa
tacatgccggtgacaaacttaaagcccgactcagaggaagcagaagatgcaaacaaactc
atggaaaacttttactccaaaaagaaatacagacaaaccgtgatgtttacagctactatg
cctccggctgttgaacgtctggcacgttcatatttgagacgacccgccactgtctatatt
ggctctgttggcaagccaactgagcgtacagaacaaatcgtttacatgatgggcgaaaat
gataaacgcaagaaacttattgagatccttaagagaggaatcgatccaccggttattata
ttcgtcaaccaaaagaaaggcgccgatgttttggctaaaggtcttgagaaattgggctac
aattcttgtactcttcacggtggtaagggacaagaacagcgtgaatatgccctagcatct
ctaaagtcgggatctaaagatatattggtggcaactgatgtggcaggcagaggtattgat
attaaggatgtgtcattggttattaattatgatatggccaaaactattgaggattacaca
catcgtattggtcgtacaggcagagctggcaaaaatggtgttgccatttcgtttgtcact
aaagatgatagtgctctattttacgatttgaagcaggtggtgatggctagtccggtttca
gtatgtccacctgagctaatgaatcaccctgatgcccagcataagccaggaacagtggtt
actaaaaagaggagagaagaaaaaatttttgcataa
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