Stomoxys calcitrans (stable fly): 106092415
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Entry
106092415 CDS
T07664
Name
(RefSeq) caprin homolog
KO
K18744
caprin-2
Organism
scac
Stomoxys calcitrans (stable fly)
Brite
KEGG Orthology (KO) [BR:
scac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scac03019
]
106092415
Messenger RNA biogenesis [BR:
scac03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
106092415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caprin-1_dimer
Motif
Other DBs
NCBI-GeneID:
106092415
NCBI-ProteinID:
XP_013114729
UniProt:
A0A1I8P453
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All DBs
Position
1:35572987..35582449
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AA seq
1288 aa
AA seq
DB search
MPSASIATPIPTTTTTNNKLVKQSSVNSMNSGGPIGSSAGSGGGGVGGGGGSSGKGNKKI
TESSIKSNNSNSSSGSNNETSSNKSAKEITNNVVAAAVTSSSSSSADQCTSASNNNGKNW
ETNSTAGNSVVAAPSAASKDAGNDALNPMKLTFTTIEHKIRNLEKRKTKLEGYRALDAIG
KELSVEQRAAVNKYDAVLATLEFARDLVKQMQQFAKDAEKEQKKQARKDLIAKAQAETTK
IREVLIIQNILSCFTDDAVRNDFMTAEHGATKLEPSEMDIIEKFCMDVQTRRPETAEDVP
FATSAQKAAEIFSMTIDARPKQYGETTYENVKRIFQRIQASDYLDKIYLTDVVETEIKEE
CNDMDNNVMEEGSGGVVGIDTLANEQEENAVGGVTSLEEGMENLHVVENVATGSVNDANE
SVMTAQQQQQPPQHHQPPMQQQPTPHHGENLEMQQHHHQQPQQQVMANMPAPGQPLLQTP
MAPPASAVPAFQTTATAPGHSGATTPVHVAMYAALPAPTPQQMQQIAPGGAIIGNVPPPA
GPGQIVTNAALAAPQQQAVAAAASVPTQTQQRQMLGSPANAAVAGMAPPMQQPPPPPPGL
YNPTPVHAVEQGFFKHPSHPQQQQQQQQQQAQQQAQQHQQYLQQMRPLAEVIGGGNFYFL
QDSELDSPELNAQGQVGPQTTIIFEQQQQQQQSQTQAPLPQQQQAPQQPQLMPQQQQQQH
VAMQNLPHQQKPSPNLLTEQNPQILTNGGGPPTTQVPMPPQQLQQNVAQQTPIQTQTFTN
QSFPQMAAANQQAANVLASNSSSPLFHQQQQQQQQQTQPMQHQAPQSQKPIQQQQQQQLF
SPVQAQNTQNMQPNSQQQQQPPSQMLMSSSVDAAQQAPGLMLINRLAANAVPQNHLMQQQ
MQQTMPPQNQPQQQQQSGLLQQQQVMGAGSVMTPHQLTTPNQNDLNNTPKSAGFPFDNPV
VTGLSYEQQMQNQLNNAANVLKKSLGVRDDESSKTSVPLNKNDLINEWTDAGLKATAVVA
AAAATTGDFKSSNVASEANKWNTAEANANSPITVQQTQQQRKNEWTSSTATPNNANVSEG
GGGGGYVSDNRSDASNHWHSQDSTQGYGRNAANRNQGSGGSGGGVGGGNPGGGYQRRNDE
RRDDRRPGGNTGGGGYRGRSNYGSGGPQQNGNTRGGQSGGSGIYFRNNENNNSGGGYYQN
GGGGGGNVYPNKDGGSRYESSGAGNYRGPRTSGNNSANPRNGPPPRHMGGGGGRTQGGQS
NSSNTNSNSYMNSRQSSNRMPLGLENKN
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atgccttctgcttcaattgcaacaccaataccaacaacaacaacaacaaataataaacta
gtgaaacaatcctccgtgaattcaatgaattctggtggcccgattggatctagtgctggc
agcggtggtggtggtgtcggtggcggaggtggtagtagtggtaagggcaataagaaaata
acggaaagttcaatcaagtccaacaacagtaatagcagcagcggcagcaacaatgagaca
tcaagcaacaaatctgcgaaggaaataaccaacaatgtggtggcagctgccgtcacctcc
tcctcatcgtcgtcggctgatcaatgcaccagcgccagcaataacaatggaaaaaattgg
gaaactaattcgaccgctggtaattccgtggttgcggctccctcggccgcctctaaagat
gctggcaatgatgccttgaatcccatgaaattgacttttaccacaattgagcataaaata
cgcaatttggaaaaacgtaagacaaagttggaaggctatcgtgcccttgatgccatcggt
aaggagttgagcgttgaacagcgggctgcagtaaataaatatgatgcggtattggcaact
cttgagtttgcacgtgatttggtgaagcaaatgcagcaattcgccaaggatgctgaaaag
gaacagaagaagcaggctcgcaaggatttgattgccaaggctcaagctgaaactactaag
atacgtgaggttttgattatacaaaacattctgtcttgtttcactgatgatgcagtgcgc
aacgatttcatgactgccgaacatggtgctaccaaactggaaccaagtgaaatggatata
attgaaaaattttgtatggatgttcaaacaagacgtcccgaaaccgccgaagatgtcccc
tttgccacttcagcccagaaggcagcggaaatattctccatgaccatagatgcacgtcca
aagcagtatggggaaaccacttatgaaaatgtgaaaagaattttccaacgcattcaagct
tcggattatttggataaaatctatttgacagatgttgtggagacagaaatcaaggaagag
tgcaatgacatggacaacaatgtcatggaggagggcagtggtggtgtggtgggaattgat
actctggccaacgaacaggaggagaatgcggtaggaggtgtaaccagcttggaggaggga
atggaaaatttgcatgtggtggaaaatgttgccactggttctgttaatgatgcaaatgaa
agcgtaatgacggcacagcaacaacagcaaccgccacaacatcatcaaccaccaatgcaa
cagcaaccgacgcctcatcatggtgaaaatttggaaatgcagcagcaccaccaccaacaa
ccacagcagcaggtaatggccaatatgccagcaccgggtcagccattgttgcaaacgcct
atggctccccctgcatcggctgtacctgctttccagactacagctactgctcctggacat
tccggagccacgacacccgtacatgtggccatgtatgctgccttacctgcaccaacacca
caacagatgcaacaaatagctcccggaggtgccattattggtaatgtaccgcccccagcg
ggtccaggacagattgtaacgaatgctgctttggcggctccgcaacagcaagctgtcgct
gctgcagctagtgttccaacacaaacacaacagcgtcaaatgcttggtagtccggcaaac
gcagctgtggctggtatggcaccaccaatgcaacaaccacccccacctccgccaggtcta
tacaatcccacacctgtgcatgctgtagagcaggggttctttaaacatccttctcatcca
caacagcaacaacaacagcagcaacaacaagcgcaacaacaggcgcaacaacaccaacag
tatttgcaacaaatgcgtcctttggctgaagtcattggtggtggcaatttctatttcctg
caggacagtgaattggattcccccgaactgaatgcacaaggtcaggttggaccacagact
actattatctttgaacagcaacagcaacaacagcagtcacagacacaggcaccgctgcca
cagcagcagcaagcgcctcagcaaccacagcttatgccacaacaacagcagcagcaacat
gtggccatgcaaaacttgccacatcagcagaagccctctcccaatcttttaactgaacag
aaccctcaaattttgacaaatggtggtggcccacccacaacacaggtgccaatgccaccc
cagcaacttcagcaaaatgttgcccagcaaacacctatacaaactcaaacattcacaaac
caatcattcccacaaatggcggcagccaaccaacaggcagccaatgttttagccagcaac
tcgtcaagtcctttattccatcaacagcagcagcagcagcaacaacaaacacaacccatg
caacatcaagcaccacaaagccaaaaacccatccaacaacaacagcagcaacaactgttt
tcacctgtgcaagcacagaatacacagaatatgcagccaaactcccaacaacaacaacag
ccaccatcgcaaatgcttatgtccagttcagtggatgctgctcaacaggctcctggtttg
atgttaatcaaccgcttggctgctaatgcagttcctcaaaatcatttgatgcaacagcag
atgcagcaaacaatgccaccacaaaatcaaccacaacaacagcaacaaagtggtttattg
caacaacaacaggtgatgggcgcaggaagcgttatgacaccccatcaactaaccactccc
aaccaaaatgatcttaataacacccccaagagtgcaggcttcccctttgacaaccccgtt
gtaaccggtctcagctatgagcaacaaatgcagaatcaactcaacaacgctgccaatgtc
ctcaagaaatcgttgggcgttagagacgatgaatcgagcaagacctcggtgccattgaat
aaaaacgatttgatcaacgagtggacagatgctggtttgaaggccacagcagttgttgct
gcggcggcagcgacaacaggtgattttaaatcttccaatgtggcctcagaggcgaacaaa
tggaatacagcagaggcaaatgccaactcgcccataacggtgcagcaaacacagcagcaa
cgtaaaaatgaatggacctcttcaacggcgacgcccaacaacgccaatgtctcggagggc
ggcggaggcggtggctatgtcagtgataatcgcagcgatgccagcaatcattggcattcc
caagattccacccaaggttatggacgtaatgcggccaaccgtaatcagggaagtggagga
tcagggggaggtgtgggtggtggcaacccaggcggtggctatcaacgacgcaatgacgaa
cgcagagatgatagaagacctggcggcaatactggtggtggcggctaccgaggacgctct
aactatggctcaggaggacctcaacaaaatggcaacaccaggggaggccaatctggtggt
agtggtatttatttccgcaacaatgaaaacaacaactccggtggcggctactatcagaat
ggaggcggcggtggcggaaatgtttaccccaacaaagatggaggttcccgctatgagtcc
agcggcgcgggcaactaccgtggcccccgcacctcaggcaacaattcggcgaatccacgc
aatggacccccacccaggcacatgggaggcggaggcggacgcacacagggtggccagagc
aactcatccaacacaaactcgaattcatacatgaactcgcggcagtcctcaaatcgcatg
ccattgggtttagagaataagaactag
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