Stomoxys calcitrans (stable fly): 106093254
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Entry
106093254 CDS
T07664
Name
(RefSeq) ATP-dependent RNA helicase p62 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
scac
Stomoxys calcitrans (stable fly)
Pathway
scac03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
scac00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106093254
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
scac03041
]
106093254
03009 Ribosome biogenesis [BR:
scac03009
]
106093254
Enzymes [BR:
scac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106093254
Spliceosome [BR:
scac03041
]
Complex A
U1 snRNP components
U1 related factors
106093254
Complex B
106093254
Ribosome biogenesis [BR:
scac03009
]
Eukaryotic type
Pre-60S particles
Helicases
106093254
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
106093254
NCBI-ProteinID:
XP_013115751
UniProt:
A0A1I8PQY6
LinkDB
All DBs
Position
2:complement(80502692..80527076)
Genome browser
AA seq
772 aa
AA seq
DB search
MFKIIVPLLTKNSCRDNANLRTACCVKNFLISPETHRKKTTLSVNNFTQRRHFLFSSTNR
KTIAAFPTYPQQQLGVSNRLGQHLELLSTNRQRRLYCSSIRQEEADNITTTTNSREKQLT
SSELGTTSKRQDSKATSANYRKQQQTLFEDSDEEEFYKMAPHDRTYGSGSRGGRDDRGGR
AEGGGERYGSRSSGGGRSGDYHGVSKGRIEKGGRGNDRGGRGFGGGGFGGGSGFGGGDRR
GGGGGNTQDLSIRPMDFSNLTPFKKDFYKEHPLVANRSYGEVQRYRDEHEITVRGNAPNP
IQDFSEAYFPDYVTKEIRRQGYKSPTPIQAQGWPIAMSGNNLVGIAKTGSGKTLGYILPA
IVHINNQQPLQRGDGPIALVLAPTRELAQQIQQVATEFGSSSYVRNTCVFGGAPKGGQMR
DLQRGCEIVIATPGRLIDFLAAGATNLKRCTYLVLDEADRMLDMGFEPQIRKIVSQIRPD
RQTLMWSATWPKEVKQLAEDFLGNYMQINIGSLELSANHNIRQVIDVCEENDKEEKLKAL
LSEIYDTSENPGKIIIFVETKRRVDHLVRFIRSFGVRCGAIHGDKSQSERDFVLREFRTG
KSNILVATDVAARGLDVDGIKYVINFDYPQSSEDYIHRIGRTGRSNTTGTSYAFFTRNNS
KQSKALVDVLREANQEINPALESMVRSSRFDGGGRSRYGNSSRYNGTFKKGSMGGGGGRT
GGYGGGRSNGYGGDSRNGYGGGDSARNGYGGGNDYNRGGGSSGGTQRHTRFD
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaaataattgtgcctttgttaacgaaaaactcgtgcagagataacgcgaatttg
cggaccgcatgttgtgttaaaaattttctaatttcaccagaaacgcataggaaaaaaacc
acattgtcggtgaataattttactcaacgacgccattttcttttttcgtcgaccaacaga
aaaactatcgcagcttttccaacatatccccaacaacaattaggagttagtaaccgctta
ggacaacacctagagctcctttccacaaatcgccaacggagattatattgctctagcatc
agacaagaggaagcggacaatattacaactactactaattccagggaaaagcagctgacc
tcatcagagttgggaacaacatccaaaagacaggactcaaaagcaacatctgcaaactat
agaaaacaacaacaaaccttatttgaagactcagacgaagaagaattttataaaatggct
cctcatgatagaacttatggcagtggcagtcgcggaggccgtgacgaccgtggtggacgt
gcagaaggaggaggagaacgttatggcagccgttcatctggtggtggccgcagtggtgat
taccatggcgtaagcaaaggccgtatcgagaaaggaggtcgcggaaatgaccgtggtggt
cgtggttttggcggcggtggctttggtggaggttctggtttcggtggcggtgatcgtcgt
ggaggtggtggtggcaacactcaagatttatctattcgcccaatggatttctccaatttg
actccgttcaaaaaagatttctacaaagaacatcccttggtcgccaatcgttcttatggc
gaagttcaacgttatcgcgatgaacatgaaatcaccgtacgcggcaatgctcccaatccc
attcaggatttcagtgaagcctatttccccgattatgtcaccaaggaaatccgtcgccaa
ggctacaaatcacccactcccattcaagctcaaggctggcccattgccatgagcggcaat
aatttggttggtattgccaaaaccggttccggcaaaactttgggttatatcttgcccgct
attgtacacataaataaccaacagcccctgcagcgtggtgatggtcccattgctttggtt
ttggcacccacccgtgaattggcccaacaaattcagcaagtggccaccgaatttggatcg
tcatcgtatgtacgcaacacttgcgtatttggcggtgcgcccaaaggcggtcagatgcgt
gatctgcaacgtggttgcgaaattgttattgccacaccgggacgtttaattgattttctt
gccgccggcgccaccaatttgaaacgttgcacatacttggttttggatgaagccgatcgt
atgttggatatgggttttgaaccacaaatccgtaagattgtctcacaaattcgcccagat
cgtcaaacgcttatgtggtccgccacctggcccaaggaagtgaaacaactggccgaagat
ttcctcggcaattatatgcaaatcaacattggctcattggaattgtcggctaatcataac
attcgtcaagttatcgatgtatgtgaggaaaatgacaaagaagaaaaacttaaagcttta
ctttcggaaatctatgacaccagcgagaatcccggcaaaattattatttttgttgaaaca
aaacgtcgcgtcgatcatttggtacgtttcattcgtagctttggtgtacgttgcggtgct
atccatggtgacaaatcacaatcagaacgtgattttgtgttacgtgaattccgtacaggc
aaatcaaatattttggtagcaactgatgttgctgcccgtggcttggacgttgatggtatc
aaatatgtcatcaatttcgattatccacaatcatctgaggattatattcatcgaattggt
cgtacgggacgatcaaataccacaggcacatcctacgcattcttcacacgtaacaactca
aaacaatccaaggccttagtcgatgtactaagagaggctaaccaggaaattaatcccgca
ctagaaagcatggtccgcagcagtcgtttcgacggtggcggtcgatctcgttatggtaac
tcctcgcgttataatggcactttcaaaaaaggatctatgggcggaggtggcggtcgtact
ggcggttatggtggtggacgcagcaatggttatggcggagacagtcgaaacggctacggc
ggtggcgacagtgcccgaaatggctatggcggcggcaatgactacaaccgcggtggtgga
tccagtggcggtacccagagacatacgcgattcgattaa
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