Stomoxys calcitrans (stable fly): 106093344
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Entry
106093344 CDS
T07664
Name
(RefSeq) RNA polymerase II-associated protein 1 isoform X1
KO
K20826
RNA polymerase II-associated protein 1
Organism
scac
Stomoxys calcitrans (stable fly)
Brite
KEGG Orthology (KO) [BR:
scac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scac03021
]
106093344
Transcription machinery [BR:
scac03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
106093344
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP1_C
RPAP1_N
DUF2891
Motif
Other DBs
NCBI-GeneID:
106093344
NCBI-ProteinID:
XP_013115843
UniProt:
A0A1I8Q6B7
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Position
1:259957920..259975262
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AA seq
1231 aa
AA seq
DB search
MIKRPKPGETEEDILRMQQEFLSQKAKNPKLQPAATMVKINRPPKQSLFAKSRQQNQASV
EPPQDARINDNSKRIYQEIHEKIVGDGADDSSSKTLTDIVMGDIVEKTVERPKVQSNVGQ
VENTAFPKIQKISLKSSSLNSERKGKSIFAQAICGNRKGQEQVPMEIEENTTDDRINNLN
DFYAHGSVVVEDTNAASEIHKENINMLCKMKEEEILAERKKLMESIDPAIVALLAKKRQE
KAKQLQTNAPIKASQPLTKPAANSPSSPPLASTESTLETLPSSNPAVEILQRSAAEQWIH
FDVVEKDKLEWMRDIPLQASKLKPGEKFEARFDWKGVLLPYSMNDIASNNSEDNDDRELY
LHGDEPHRPGYTLQELFRLARSNVMQQRVTAFSALAGMLSIYQQGFYDQVLELPISKIFF
LLRFGFDDNTPAMLEIVGKALAYLFYNETDETLLDFVYENPGCQWQPCLQVLNTDSGGDE
EMSSIEHLQKQMEQLQMSFKGRAATVKANVEENEEESKTSMSDFQLAETDLIDCLLRTNI
LQRIYFILNTVRPDNSTVSSCLKLLIRLARSGKEVAMQIVNNDELMKCLFENFLPGLEKI
DTSLRTPPFYNYPQYLCLKLMRSLISCNLSIATKLMNMKLIDILENYLFNREDIKTNLIK
VQIESLRCLRCLLLLRMENNTLHKKFLHAFRYMLDWHFNHVIYEEGGPFLIRQHAAAVLA
TIASISSPVGSEVTTLLGDILHDCSCNWFHKATRFGVKEFSQATLLSSCLNAVTWYIRHT
DTARYQNFIQKYLSEFIQSENFVKFLNTISSSSLVLRRSVDRRNVHNPLPNVGAVIMNSY
GPQLVITQTYPIFLITTVWRFMELLLERNEKHIFDALLSPKTLDPMVDYLRNLSTKCNRY
LATNFFAKMEIKLLFKLLCFEGFSEYFKPSEMLQIVYNFLCCLTAEHIPEVEELFERVIF
NRRYINIDEDTLNKWRKICLELVYSHYIVVPPTELTLFLPFSQVPILPPDWPYFQLKIIL
QNYVENVQQKKSAADFSEREILQMTLNFVTQLEDCNEQLEIVSPTEKLMYLMIAFMGPES
QFLDREMNQLLRQHLKKFYQQCENVEFLFDKEYQGKCKFENLYVLFVDHFQAASYGDELF
SSLLMIPLAQKYDNKWRRRVWSDCASALRFLDCSEELLIGGLNAYLYPCEEEASLVKLYN
EALNMNLVRPNSVPYKIARHHVDKFKERFTK
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atgattaaaagacccaaacctggtgaaacagaggaagatatacttcgcatgcagcaagaa
tttctttcgcagaaggccaaaaatcccaaattgcaaccggctgcaacaatggtgaaaatt
aacagacctcccaagcagtcgctgtttgccaaatctaggcaacaaaatcaagcctcagtt
gagccaccacaagatgcgcgaatcaatgataactcaaaacggatttatcaagaaatccat
gaaaagattgttggcgatggggcagacgatagttcaagtaaaaccctgaccgacattgtt
atgggcgacattgtggagaaaactgtggagaggccaaaagttcaaagtaatgtcggccaa
gtggaaaacactgcttttccgaaaatacagaaaatatccctaaaatcatcttccttaaac
tcggaaagaaaaggaaaaagtatatttgcccaggctatatgtggtaaccgcaaaggacag
gaacaagttcccatggaaattgaagaaaacacaactgatgacagaattaataatttgaat
gacttttatgcccatggaagtgttgttgtcgaagatacgaatgcagcttcagaaatacac
aaagagaacataaatatgctgtgcaaaatgaaagaagaggaaatattggcggaaagaaag
aaactaatggaatccatagatcctgcaattgtagctttgttggctaagaaacgtcaggaa
aaggctaagcaactccaaacaaacgcccctattaaagcatcccagccattaacaaaacct
gctgcgaattccccatcatctccaccactagcttctacagagagcacacttgagactcta
ccttcatccaatcccgccgtggagattcttcaacgttcagcagccgaacaatggatacat
tttgatgttgtcgaaaaggataaactcgaatggatgcgtgatatacccttgcaagcgtcc
aaacttaaacctggagaaaaatttgaagctcgttttgattggaaaggtgttctattgcca
tatagcatgaatgatattgcgagcaataatagtgaggacaatgatgatcgtgaattatat
ttacatggcgatgagcctcatcgacctggatatacgctgcaggaattatttcgtttagcc
cgttcaaatgtaatgcaacaacgtgtcaccgcttttagtgccttggcgggaatgttaagc
atctatcagcaaggattctacgatcaagtcttggaattgcccataagtaaaattttcttt
ttgctacgatttggatttgatgataacacaccagcaatgctggaaattgtgggcaaagct
ttggcctatttgttttacaatgaaacagatgagacccttctggatttcgtatatgaaaat
cccggttgtcaatggcagccttgtttgcaagttttaaacaccgattctggtggcgacgag
gagatgtcttctattgaacatttacaaaagcagatggaacaattgcagatgtcttttaag
ggtagggcagctaccgttaaggccaatgttgaagagaacgaagaggaaagcaagacatca
atgagtgattttcaattagcagaaactgatttaatcgattgcctactcaggaccaatata
ttgcagagaatttattttattttgaatacagtgcgtccagataatagcaccgtttcttct
tgcttgaaattgctcatacgcttggctagatctggcaaagaagtggctatgcaaatagtc
aacaatgatgaattaatgaagtgtctatttgaaaactttttacctggtttggagaaaatt
gatacctcccttcgaacccctcccttttataactatcctcaatatttgtgcttgaaattg
atgagaagtttaatatcctgcaatctaagcatagccacaaagttgatgaatatgaaactg
attgatattttggagaattacctattcaatcgggaagacatcaagactaatcttatcaaa
gttcaaatcgaatctttgcgttgcttgagatgtctgctactgctgcgcatggaaaataac
actttgcacaagaaattcttacacgcctttcgttacatgctcgattggcatttcaatcat
gtcatctatgaagagggcggtcccttcttaatacgtcaacatgcggcggccgttctagca
acaatcgccagcataagcagtccagtgggttctgaggtaactacgctgttgggcgacatt
ttgcatgattgcagttgtaattggtttcataaagccacacgattcggtgtgaaagagttt
tcgcaggcgactttattgagttcgtgcctaaacgctgtcacttggtacatacgtcacacg
gacacagcacgatatcagaatttcattcagaaatatttgagtgaatttattcaatcggag
aattttgttaaatttctcaataccataagctcttcatctttagtcctacgtcgatctgta
gatcggcgcaatgttcacaatccattgcccaatgttggtgcggtaataatgaattcgtat
ggcccccaattagttataacgcagacatatcctatttttcttataaccacggtatggcga
ttcatggaactacttttggaacgaaatgaaaagcatatatttgatgccctactttcgccc
aagactttggatccaatggtggattatttgagaaatttaagcacaaaatgcaacagatac
ttggccacaaacttctttgctaaaatggaaatcaaattgctatttaaattattatgtttc
gagggttttagtgaatattttaagccatcggaaatgttacaaatcgtctataacttcttg
tgctgtttgactgccgaacatatacccgaagtggaggaactatttgaaagagtgattttc
aaccgacgttacataaacattgatgaagatactttaaataaatggcgcaagatatgcctg
gaactagtttacagtcattacattgtggtgcctcctaccgaattaaccttatttctgccc
ttcagtcaagttcccattctacctccggattggccctatttccaattgaaaataatttta
caaaattatgtggaaaatgttcagcaaaagaaatctgctgctgacttttcagaacgagaa
attttacagatgaccttgaattttgtaacccaattggaggattgtaatgagcaattggaa
attgtttcccccacggaaaagttaatgtatttaatgatagccttcatgggtccagaatct
caatttttggatagagaaatgaatcaattattgcgtcagcatctcaagaaattctatcaa
caatgtgaaaatgttgaatttcttttcgacaaggaatatcaggggaaatgcaagtttgaa
aacctttatgtgctatttgtggatcattttcaagctgccagttatggtgatgagttattt
agttccttgcttatgatacctctggcacagaaatatgacaataaatggcgaagaagggta
tggtctgattgtgcttctgcccttaggtttcttgattgcagtgaagaattgctgattgga
ggcttaaacgcatatctctatccttgcgaggaggaagcatcattagttaagttgtacaat
gaagcgttgaatatgaacttggttcgtcccaacagtgttccttacaaaatagcacgacat
catgtggataagttcaaagaacgctttacaaaatga
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