Stomoxys calcitrans (stable fly): 106094071
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Entry
106094071 CDS
T07664
Name
(RefSeq) ATP-dependent RNA helicase me31b
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
scac
Stomoxys calcitrans (stable fly)
Pathway
scac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106094071
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scac03019
]
106094071
03036 Chromosome and associated proteins [BR:
scac03036
]
106094071
Enzymes [BR:
scac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106094071
Messenger RNA biogenesis [BR:
scac03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
106094071
mRNA degradation factors
5'-3' decay
Decapping complex
106094071
Chromosome and associated proteins [BR:
scac03036
]
Eukaryotic type
Gene silencing
piRNA pathway
106094071
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA
Motif
Other DBs
NCBI-GeneID:
106094071
NCBI-ProteinID:
XP_059221025
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All DBs
Position
3:complement(103955757..104044866)
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AA seq
454 aa
AA seq
DB search
MMTEKLNSPLADIINKSLNKVANIGDDMGWKSKLKIPPKDNRFKTSDVTDTRGNEFEEFC
LKRKLLMGIFEKGWERPSPIQEAAIPIALSGKDILARAKNGTGKTGAYCIPVLEQIDPSK
DYIQALIMVPTRELALQTSQICIELAKHLDIRVMVTTGGTILKDDILRLYQKVQLIIATP
GRILDLMDKRVADMSHCKILVLDEADKLLSLDFQGMLDHVILKLPKDPQILLFSATFPLT
VKNFMEKHLREPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSKLQINQSIIFCNS
TQRVELLAKKITELGYCCYYIHAKMAQAHRNRVFHDFRQGLCRNLVCSDLFTRGIDVQAV
NVVINFDFPRMAETYLHRIGRSGRFGHLGIAINLITYEDRFDLHRIEKELGTEIKPIPKV
IDPALYVANVAVNSGETSNNDLNNSCIEEGNVSK
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgatgacagagaaactcaattcccctcttgcagatataataaacaaaagcctaaataaa
gtagcgaatattggagacgatatgggttggaaatcgaagcttaagatacccccaaaagac
aatcgctttaaaacaagcgatgtaactgatactcgtgggaatgaatttgaagaattctgc
ttaaaaaggaaacttttaatgggtatttttgaaaaaggatgggaacgtccttcgccgata
caagaagcagcaattccaattgcattaagtggaaaagatattttagcgagggctaaaaat
ggtacaggaaaaactggcgcatattgtattccagttttggagcaaatcgatccatccaag
gattacatacaggcattaataatggttccaacgagggaacttgcactgcaaacatctcaa
atatgtattgaattggctaagcatcttgatattcgggtaatggtaaccactggtggcaca
attcttaaagatgatatattgcgcttgtatcaaaaagttcagctcattattgcaactcca
ggacgaattctcgacttaatggataagcgggtagctgatatgtctcactgcaagattcta
gtgttagatgaagccgacaaattgttgtcgcttgactttcaaggcatgctggaccatgtt
attttgaaattaccaaaggacccgcaaatcctcttgttttcggcgactttcccattaact
gttaaaaattttatggagaagcatttacgggagccttacgaaattaatttaatggaagaa
ttaacattaaaaggagttactcaatactatgcattcgtccaagaacgtcagaaagtacat
tgtctaaacacattgttctcgaaacttcaaataaatcaatccatcatattttgcaattct
acacagcgcgtagaacttctagcaaaaaaaattactgaacttggatattgttgttactac
atacatgcaaaaatggcacaagcacatcgaaatcgagtttttcacgacttccgccaaggt
ttgtgccgaaatcttgtatgttcggatttatttactcgtggaatagatgttcaagccgtg
aatgttgttattaatttcgactttccaagaatggcggagacatatttgcatcggattggt
cgctctgggcgatttgggcacttaggtattgctattaacttaataacctatgaggacagg
tttgacctacatcggatcgaaaaagaactcggaacggaaatcaaaccgattccgaaagtt
attgaccctgctttgtatgtggcgaatgttgccgtaaattctggagaaactagtaataac
gatcttaataactcgtgcatcgaggaaggaaatgttagcaagtaa
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