Stomoxys calcitrans (stable fly): 106094147
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Entry
106094147 CDS
T07664
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
scac
Stomoxys calcitrans (stable fly)
Pathway
scac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106094147
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scac03019
]
106094147
Messenger RNA biogenesis [BR:
scac03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106094147
mRNA degradation factors
5'-3' decay
Lsm complex
106094147
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
106094147
NCBI-ProteinID:
XP_013116789
UniProt:
A0A1I8PGW4
LinkDB
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Position
5:37139617..37140760
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AA seq
137 aa
AA seq
DB search
MDDLNPLAGTAHLLEEVDKKLMVLLRDGRTLIGYLRSVDQFANLVLHRTIERIHVGNEYG
DIPRGVFIIRGENVVLLGEIDREKESKLPLKEISVDDILDAQRREQEQRQEKHRLISKAL
KERGLAVNTDIINEDFC
NT seq
414 nt
NT seq
+upstream
nt +downstream
nt
atggatgatttaaatcccctggccggcactgctcatttactggaagaagttgataaaaaa
ttaatggtgctgctccgggacggaagaacacttattggatatttacgttcggtggatcaa
tttgcaaatttagttttgcaccgcaccatagagcgcattcatgttggcaatgagtacggt
gatataccgcgtggagtttttattatacgaggagagaatgttgtgctattgggggaaatc
gatcgtgaaaaagaatcgaaactacccttgaaagagatttctgtggatgatattctggat
gctcaacgacgtgaacaggaacaacgacaagaaaaacatcgtcttatatcaaaggcttta
aaagaacgcggcttagcagttaataccgatataattaatgaagacttttgttag
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