Stomoxys calcitrans (stable fly): 106094469
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Entry
106094469 CDS
T07664
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
scac
Stomoxys calcitrans (stable fly)
Pathway
scac03018
RNA degradation
scac03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
scac00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106094469
09123 Folding, sorting and degradation
03018 RNA degradation
106094469
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scac03019
]
106094469
03041 Spliceosome [BR:
scac03041
]
106094469
Messenger RNA biogenesis [BR:
scac03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106094469
mRNA degradation factors
5'-3' decay
Lsm complex
106094469
Spliceosome [BR:
scac03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
106094469
Complex C
U2 snRNP components
106094469
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
DYW_deaminase
Motif
Other DBs
NCBI-GeneID:
106094469
NCBI-ProteinID:
XP_013117144
UniProt:
A0A1I8P7V1
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Position
1:complement(260638316..260639077)
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AA seq
94 aa
AA seq
DB search
MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPEKYPHMLSVKNC
FIRGSVVRYVQLPGDEVDTTLLQDAARKEAVSSR
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgttgttttactcattcttcaagtcgttggtcggcaaagatgtagtggtggagcttaaa
aacgatctcagcatatgtggaactttacattcggtggaccaatatctgaatattaaactc
accgacataagtgtgactgatccggaaaagtatccccacatgttgtcggtgaaaaattgc
ttcatacgtggttccgtggtgcgctatgtccaattgccgggtgatgaggtcgatacaacc
ctgttgcaagatgcagctcgcaaggaagcggttagctccagatga
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