Stomoxys calcitrans (stable fly): 106095142
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Entry
106095142 CDS
T07664
Name
(RefSeq) probable DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
scac
Stomoxys calcitrans (stable fly)
Pathway
scac03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
scac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
106095142
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scac03400
]
106095142
DNA repair and recombination proteins [BR:
scac03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
106095142
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
Motif
Other DBs
NCBI-GeneID:
106095142
NCBI-ProteinID:
XP_059225843
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Position
1:complement(70435119..70452994)
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AA seq
1177 aa
AA seq
DB search
MSKKLNSSFGKDVGSPKNTLFKYFSSPASKKILKTPTTTEKKNNNNADEIKGNEKLKNGD
AGATSMDVSEDEEDVIGAKKNRKRYVLLDSDDEADGATASKKKVESSPESEKENKRKILS
DEEEEASSEAEKSSPEKHKKRSKHNEPKSKKVKLDESVATGTFMEKLQHLQSSEQYKTSK
KQEAKCEAIVTTSTLDEPVIWPHQKLEFLKPDKIKDKQGRRPDHPEYDPSTLYVPEKFLD
SLSPGVRQWWILKSDHYDCVLFFKVGKFYELYHMDADVGVNELGFTYMRGEFAHSGFPEI
SFDKMASVLVERGYKVARVEQTETPDMMTERCKRTKSTKFDKVVKREICQITDRGTQVYG
SQSRVTQNHQASYMLAIVEKPLQVGGTSNYGICFVDTSIGDCYIGEFDDDKNCSRLHTLL
SHHMPVLVVLEKSNIQEKTQDIMRTVLGGTLKEYMPATGSQQCTAEKTLKELAENYYAGG
DNWPLVLRTMQDDSDHLGLTPHRESKLALKALGLCIGYMKKCKVAEKVLPMVRYHLYQPP
DTLAMKSDKKDVPKKSFMQQRAHMVLDATTLMNLRITGEEHSLQSTLDQCCTKFGKRLLH
HWLCAPSCNLGTIKDRQDAISEFLNNTNLLQEFRGLIAPLPDFERYLAQFHHFGSKIVQE
KHPDGRAIFFEEKVYNKKKIQNFIAILKGFDTLAKIPAIFEDVCSTQLKHLSQGSDKEGA
FPDMREQLTFFQQAFDHAKASESGVIAPEHGVDEDYDRAEDKIKCINKELQSYLVEQEKF
FGCRITYFGSDKKRFQLEIPESHARKANSKYALEGQKKGSKPTRRYTTEETRAFLKQMQT
AEEERNNILRDLSRRIFEKFSQQYGLWKQSVDCVAELDVLASLAEYARMQSTSMCIPELF
NPEMGQQAFIEIEEGYHPCVSSETYIPNGLALGCNETAPLSLLTGPNMGGKSTLMRQVGL
LTVMAQIGAHVPAERCRLSLVDRIFTRLGAQDDILSGHSTFLVELNETSLILKHATPNSL
VLLDELGRGTATYDGTAIAASVVNFLADLKSRCLFSTHYHNLIDFFHKDPRITLGHMACM
VENEDTEDPTQETVTFLYKYSSGACPKSYGFNAAKLAGMPHEVIKRAYMLSKKVEALALK
RKLAAKIVAAAAVGNTGSAWQSSNLKNLLIQLQKCQV
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaaaattaaattcttcctttggcaaagatgtgggatcacctaaaaatacactt
tttaaatacttcagctcgccggcgagcaaaaaaatattgaaaactccaacgactacagag
aagaagaataacaacaatgcggatgaaatcaaaggcaacgagaaattaaaaaatggtgat
gcgggagcaacttctatggatgtatccgaggatgaggaagatgtgattggagcaaagaag
aatcgtaaacgttatgtactgttggattccgatgacgaggcagatggtgcaacggcatcc
aagaagaaagtggaatcatcaccggagtcggaaaaagaaaacaaacgaaagatcctgtct
gatgaggaagaggaagcttcatctgaagcagaaaaatcttccccggaaaaacataagaaa
aggtcgaagcataacgagcccaaatcaaaaaaggttaaacttgatgagtctgtggccacg
ggcacctttatggaaaaattgcaacatttgcaatcgtcagagcaatataaaacctctaag
aaacaagaagccaaatgtgaggccattgtgaccacatccactttagatgagcccgtcata
tggccacatcagaaattggaattcttgaagcctgacaaaattaaagataaacaaggacga
cgaccagatcatccagagtatgatcccagcacattatatgtaccggaaaaatttttggat
tcactttcaccgggcgttcgacaatggtggatactaaaatcggatcattatgattgtgtg
ctattctttaaagtaggaaaattctatgagttgtaccacatggatgccgatgtgggagtt
aacgagttgggtttcacctacatgagaggtgaatttgcccattccgggtttccggaaata
tcttttgacaaaatggcctctgttttggttgaaagaggctacaaagttgcccgcgtagaa
caaaccgaaacccctgatatgatgaccgaaagatgcaaacgcactaaatctactaaattc
gataaagttgtaaaacgagaaatatgccaaatcactgatcgaggaacccaggtctatggt
tctcaaagtcgggttacccaaaatcatcaagcgagttatatgttggccatagtggagaaa
ccacttcaggtgggtggtacaagcaactatggaatctgttttgttgatacttccattggt
gattgttatattggcgagtttgatgatgataaaaattgttcaaggttacacactctacta
tcacaccatatgcctgtcttggtggtgttggagaaatccaatatccaagagaagactcag
gatataatgagaactgttctgggtggcacgttgaaagaatatatgccggccactggtagt
caacagtgtacagctgagaaaaccttaaaagaattggccgagaactattatgctggtggt
gataattggcctctggtgttgagaacaatgcaggatgattcagatcatttgggtttgaca
cctcatcgtgaatcaaaattggccctcaaagctttgggcttatgcatcggctatatgaaa
aagtgtaaagtggccgaaaaggttttaccaatggtgcgatatcatttgtaccaaccgcca
gatactctggctatgaaaagcgacaagaaagatgttcccaagaaatcattcatgcaacaa
agagctcatatggttttggatgccaccactctgatgaatctgcgcattacgggtgaggaa
cattcacttcaatctactttggatcaatgctgcacgaaatttggtaaacgtttactgcac
cattggctttgtgctccctcatgcaatttgggcacaataaaagatcgacaagacgctatt
tcagagttcctaaataacacaaatcttttgcaagagttccgtggtttaattgctccctta
cccgatttcgaaaggtatttggcacaatttcatcatttcggtagtaaaattgtccaagaa
aagcatcctgatggcagagccatattctttgaagaaaaggtgtataacaaaaagaaaata
cagaatttcattgccatactcaagggttttgataccctggcaaagattcctgctatattt
gaggatgtgtgctcaacccaactaaaacatttgagccaaggatccgataaagaaggagcc
ttccccgatatgagggaacaattgacattctttcagcaagcctttgatcatgcaaaagcc
tcagaaagtggtgttattgcccctgagcatggagttgatgaagactatgacagagctgaa
gataaaatcaaatgcatcaataaagaactacaatcgtatttagtggagcaggaaaagttt
ttcggttgccgcattacctattttggtagcgataagaagcgttttcaactagaaattcct
gaatcccatgctcgcaaagcaaatagtaaatatgctttggagggtcaaaagaagggatct
aagcccacccgccgatacaccactgaagaaaccagggcttttctcaaacaaatgcaaact
gccgaagaggagcgtaataatatattaagggatttgtctcgacgtattttcgaaaagttt
tcccaacaatacggtctatggaaacagagtgtggactgtgttgctgagctggatgtttta
gcttctctggccgaatatgcccgcatgcaaagtacttccatgtgcataccagaattgttt
aatcccgaaatgggacaacaagcatttatagaaattgaagagggttatcacccttgtgtc
tcctctgagacttatataccaaatggcttagctttgggttgtaatgagacagcacctttg
tctttactaacaggaccaaatatgggaggaaaaagtacgctcatgcgacaagtgggtttg
ttgactgtaatggctcagattggtgctcatgtgcccgcagaacgctgtcgtttgtcttta
gttgatcgcatatttaccagattgggagctcaggatgatatattatcgggtcattcaaca
tttttggttgaattgaatgagacatctttgatcttgaaacatgcaacacccaatagcttg
gtgttattggatgaattgggacgaggcacagccacctatgatggcacagccattgctgct
tccgttgttaactttttggctgatctcaaatctcgttgtttgttttccacccattatcat
aatttaatagatttcttccacaaagatcccagaattactttggggcatatggcttgcatg
gttgaaaatgaagatactgaagatcccacgcaagaaacagttaccttcctttataagtat
tcatcaggagcttgtccaaagtcgtatggttttaatgcagcaaaattagcgggcatgcct
catgaggttattaaacgtgcttatatgctttcgaaaaaggtagaggctttggctcttaag
cgcaaattagctgccaaaattgtagctgcagccgcagttggcaacacaggatccgcttgg
cagagtagcaatttaaaaaatttgctaattcaacttcaaaaatgtcaagtttga
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