Stomoxys calcitrans (stable fly): 106095617
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Entry
106095617 CDS
T07664
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
scac
Stomoxys calcitrans (stable fly)
Pathway
scac03030
DNA replication
scac03410
Base excision repair
scac03420
Nucleotide excision repair
scac03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
scac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
106095617
03410 Base excision repair
106095617
03420 Nucleotide excision repair
106095617
03430 Mismatch repair
106095617
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scac03032
]
106095617
03400 DNA repair and recombination proteins [BR:
scac03400
]
106095617
DNA replication proteins [BR:
scac03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
106095617
DNA repair and recombination proteins [BR:
scac03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
106095617
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
Rad17
AAA_22
AAA_14
RuvB_N
RCF1-5-like_lid
PTCB-BRCT
nSTAND3
AAA_30
AAA_33
AAA_17
RNA_helicase
AAA_5
AAA_18
BRCT_2
AAA_16
DUF1757
Motif
Other DBs
NCBI-GeneID:
106095617
NCBI-ProteinID:
XP_013118319
UniProt:
A0A1I8PP52
LinkDB
All DBs
Position
2:231611956..231616015
Genome browser
AA seq
1042 aa
AA seq
DB search
MQPTIASYFQKSAAKEKPKDVEPKKRKARIISSDEDDEVVAASPQVAKTKHSKKLKTDSN
GSSNTVSPSASKKLKLDKLKSKSPVKAVDPMSLFGGETNRVEAKKAPKPKDKALKEFEDD
EIDQSLMEIDLEQSLVETTVKESDQKNEKHTPSKVKHEKSTPSKEKSNNDKKYTPTKDEK
KRDKDDKRTPKSEKHKYDKKSSVEHRRKEDTKHTPTEHKRTSKASKNSPTDEDDNPIKGK
KHKQDLDSSVLTDEERHERKRMTAILYQKYKNRSSVLNHGCKEVPKGKPNCLAGLSFLVT
GVLESLQRDEANSIVKEYGGKVMSTVGKRLNYLIVGEDAGLKKLAQAEEYNVKILSEDDF
LNLIRQKSGIATENGNGTVRDYGEMPSTSPKTKKDFKKGREEEVKIKKEKVDSPKRKSNV
EELNNNVSPKKLKREIKEETTFKEHISKIKKEIKDEVTSKDIKEEFPRPPPVTEDMMAWV
DKYKPTTVKDIIGQQGPASNVAKLTNWLSKWYINHDGKKKLQKPNPWAKNDDGSFYKAAL
LSGPPGIGKTTTATLVCKELGFDAVEFNASDTRSKRLLKEEVSELLSNKSLYGYFHGNGQ
VTKKHVLIMDEVDGMAGNEDRGGIQELIGLIKESSVPIICMCNDRNHQKMRSLVNYCYDL
RFNRPQLKQIKGRILSICAKENIKLDSTKLDEIIAATNNDIRQSINHISLLSAGKELNLP
SDKVSSNADEKIAQKDLKMGPWDVVRKVFSADEHKNMSFYDKCDLFFHDYSLAPLFVQQN
YLIVNPAGPKSEVIQKVANTADSLSLGDLVDKKIRSNSSWALLPTQAIFSSVMPGEYMSG
YFTGQINFPGWLGKNSKSSKRCRFAQEIHDHTRIKTSGSRLSVRLDYAPFLLNKIVKPLA
EKGLDGVEESLQTLKEYHLLREDIESLIELTTWPGKKSPMDGVDGKVKAALTRAYNKEVL
AYSYSATAGVKKKRAEASEEFESLGVDGDEGDIAAADSEDDKDDALENDGLIKAKKKTAA
STSKAVAKKTTGKAKANLKSKK
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgcagcctactattgcatcgtattttcaaaagagtgcagcaaaggaaaaaccaaaagat
gtggaaccaaaaaaacgaaaggcacgtatcatatccagcgacgaggacgatgaagtggta
gccgcatctccacaggttgccaaaacaaaacatagcaaaaaactcaagactgattccaat
ggctcaagcaacaccgtctctccttccgcatctaagaaattgaagttggacaaattgaag
tcaaaatcacccgtcaaagctgtagatccgatgtctttgtttggcggcgaaactaataga
gttgaagccaaaaaagctcctaagcctaaggacaaggctttgaaagaattcgaagacgat
gaaatcgatcaaagtttaatggaaatcgatttggaacaaagtcttgtcgaaacgactgtt
aaagaatcggatcaaaagaatgagaaacatacaccaagtaaggttaaacatgaaaaatcc
acaccctcgaaagaaaagagcaacaatgataagaaatatacaccaaccaaagatgaaaag
aaaagggataaagatgacaaaagaactcccaagagcgaaaagcataaatatgataaaaag
tcttccgttgagcataggcgtaaggaggacactaaacacactcctactgaacataagaga
acttccaaagcgtcgaaaaattctcctacggatgaagatgataaccctataaagggaaag
aaacataagcaagacttggattcaagtgttcttaccgatgaagaacgccatgagcgcaaa
cgtatgacagcaatactctatcaaaaatataaaaatcggtcatctgttctaaatcacgga
tgcaaagaagtaccaaagggaaaaccaaattgcttggccggtttaagttttcttgtcaca
ggtgttctagagtctcttcagcgtgatgaagccaactctatcgtcaaagaatatggaggc
aaagtaatgagtactgtaggtaaacgtttaaattaccttattgtaggcgaagatgccggc
ctcaaaaaacttgctcaggctgaggagtacaacgtaaaaattttaagtgaagacgatttt
ctcaaccttatacgccaaaaatcgggtattgcaacagaaaatggtaatggcacagttcgg
gattatggtgaaatgcccagtacgagcccaaaaactaagaaagattttaaaaagggaaga
gaggaggaagtgaaaatcaaaaaagaaaaagtcgattctccaaaaaggaaatcaaacgtg
gaagaactgaacaataatgtgtcacccaagaaacttaaacgtgagataaaggaggagaca
acctttaaagaacacatatcaaaaattaaaaaagaaattaaagatgaggtgacttctaaa
gatattaaagaggaatttccccgaccgccgcctgttacagaagatatgatggcctgggta
gataaatacaaacctaccactgtaaaggatattattggccaacagggaccagccagcaac
gtagcaaagcttaccaactggctttcaaaatggtacataaatcatgatggcaagaaaaag
ttgcaaaaaccaaatccatgggctaagaacgatgatggtagtttttacaaggcagcacta
ctatcaggtcctcctggcattggcaaaactactactgcaactttggtttgcaaagaactg
ggcttcgatgctgttgagtttaatgcctcagacactcgtagcaaacgcttattgaaggaa
gaggtttccgagttactttccaataaatctctttacgggtacttccatggcaatggtcag
gtaacaaagaaacatgttctaatcatggatgaagttgatggcatggctggtaatgaggat
cgtggaggtattcaggagttaattggacttatcaaagagtcttctgttcctattatttgt
atgtgcaacgatcgcaatcatcagaaaatgcgctcacttgtgaactattgttacgatctt
cgttttaatcgtcctcaactgaagcaaatcaagggacgaatattaagcatttgtgccaag
gaaaatattaaactagattcgacaaaactggacgaaattatagcggcgacaaataatgac
attcgtcaatcgattaatcacatctccttactaagcgcaggaaaagaactcaatctgcca
tctgacaaagtgtcttcgaatgcagatgaaaaaattgctcaaaaggatttgaaaatggga
ccgtgggatgtagtgcgtaaagttttctctgcagatgaacataagaatatgtcattctat
gacaagtgcgatctatttttccacgactacagtttggcaccactgtttgtacaacaaaat
tatttaattgtgaaccctgcagggccgaaatcagaggtaattcaaaaagtagctaacacc
gctgactccctgagcttaggtgacctagttgataaaaagattcgatctaattcttcgtgg
gctctactgccaactcaagcaatttttagttctgttatgcccggtgaatatatgagtgga
tactttactggacaaataaactttcctggctggctgggaaaaaattctaaatccagcaaa
cgttgtcgttttgcccaagaaattcacgatcatacacgtataaaaacgtcaggttctcgc
ctttctgtacgcctagactatgcccctttccttctaaacaaaattgtaaaaccattggca
gagaaaggcttggatggagttgaagaatccctgcaaacattaaaagagtatcaccttctg
agagaagatattgaaagtttgattgaactaactacatggccaggcaaaaagagtcctatg
gacggtgtagatggtaaagtaaaagctgctctcactagagcctacaacaaggaggtattg
gcctactcgtactctgccacagcaggtgtaaagaaaaaacgtgctgaagcatcagaggaa
tttgaaagcttgggtgtggacggtgacgagggagacattgccgcagcagattcagaagac
gataaggatgatgcgttggaaaatgatggcttaattaaggcgaagaagaagactgcggca
tcaacatcgaaagcggttgcaaaaaaaactactggaaaggctaaagcgaatctcaaatca
aaaaaataa
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