Stomoxys calcitrans (stable fly): 106095741
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Entry
106095741 CDS
T07664
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
scac
Stomoxys calcitrans (stable fly)
Pathway
scac03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
scac00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106095741
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
scac03041
]
106095741
03009 Ribosome biogenesis [BR:
scac03009
]
106095741
Enzymes [BR:
scac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
106095741
Spliceosome [BR:
scac03041
]
Complex A
U2 snRNP components
U2 related factors
106095741
Complex B
106095741
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
106095741
Ribosome biogenesis [BR:
scac03009
]
Eukaryotic type
90S particles
Helicases
106095741
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
DEAD
AAA_19
AAA_22
nSTAND3
SRP54
Flavi_DEAD
ResIII
ABC_tran
ATPase
AAA_30
AAA_25
AAA_7
PhoH
T2SSE
TsaE
Motif
Other DBs
NCBI-GeneID:
106095741
NCBI-ProteinID:
XP_013118522
UniProt:
A0A1I8P3Q3
LinkDB
All DBs
Position
Unknown
AA seq
738 aa
AA seq
DB search
MSKRRIEVGETYEKKRTKDEAAPSTSAASTSSAGNSSLPATGQQLGVMAASLNKQPGTMN
PFNMRPYSQRFHQLYKKRITLPVFEYQADFMRLLNNHQCIVLVGETGSGKTTQIPQWCVE
YAVSKGKKGVSCTQPRRVAAMSVAQRVSEEMDVNLGEEVGYSIRFEDCSSAKTLLKYMTD
GMLLREAMSDPMLEQYQVILLDEAHERTLATDILMGVLKEVIRQRNDLKLVVMSATLDAG
KFQQYFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEIEGDILMFLTG
QEEIEEACKRIKREIDNLGSDIGELKCIPLYSTLPPNLQQRIFEPAPPPNANGAIGRKVV
VSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTKP
GKCFRLYTEKAYKNEMQDNTYPEILRSNLGTVVLQLKKLGIDDLVHFDFMDPPAPETLMR
ALELLNYLAALDDDGNLTDLGAVMSEFPLDPQLAKMLIASCQHNCSNEILSITAMLSVPQ
CFVRPNEAKKAADEAKKRFAHVDGDHLTLLNVYHAFKQSSEDPNWCYENFINFRSLKSAD
NVRQQLARIMDRFYLKRSSTDFISKDYYINIRKALVQGFFMQVAHLERTGHYLTIKDNQI
VQLHPSTCLDHKPDWVIYNEFVLTTKNYIRTVTDVKPEWLLTLSPQYYDLNNFPHCEAKR
QLEMLQQRLESKQFQKGF
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaaggcgtattgaagtgggtgagacctacgaaaaaaaacgcacgaaggacgaa
gcagcaccatcaacttctgcggcatcaacatctagtgcaggaaattcgtctttacccgcc
actggacagcagcttggagtaatggccgcttcgcttaataaacagccaggcacgatgaat
ccgtttaacatgcggccctactcgcaacgtttccatcaactgtacaagaagagaatcact
ttgcccgtttttgagtatcaggcagattttatgcgtttgcttaataatcatcagtgcatt
gttctggtgggtgaaactggttccggcaagaccacacaaataccccagtggtgtgttgaa
tatgccgtctccaagggaaagaagggggtttcctgtacacaaccacgtcgtgtagcagct
atgtcagtggcacagcgtgtatcggaggaaatggatgtcaacttgggcgaagaggttggc
tattccatacgttttgaggattgctcttcagcaaagactttgctcaaatacatgacagat
ggtatgttgttgagagaagctatgtcagatcctatgttggaacaataccaagtcatattg
ttggacgaagctcacgaaaggaccctagccacagatatattgatgggcgtactgaaagaa
gttatccgccaaagaaatgatctgaagctagttgtgatgtctgctactctggatgcgggc
aaattccagcagtactttgacaatgcacccctcatgaatgtgcccggtagaacccatcct
gtagaaatcttctataccccagaaccggaacgtgattacttggaagcagccattcgtaca
gtcattcaaatacatatgtgtgaagaaattgaaggtgatattcttatgttcctcaccggc
caggaggaaattgaggaggcttgcaagcgtattaaacgtgagattgacaatttgggttca
gacattggcgaactcaagtgtatacctttgtattcaacattgccaccgaatttgcaacaa
cgcatttttgagccagcgcctccgccaaatgctaatggcgctattggtcgtaaagttgtt
gtttcgactaacattgccgaaacttcgttgaccattgatggtgttgtgtttgtgattgat
cccggatttgctaagcaaaaagtgtataaccctcgtatacgtgtggaaagtttgctggta
tcgcctatttctaaagcttcggcccaacagagagctggtcgtgccggtcgtacaaaaccc
ggaaaatgtttccgactctacacagaaaaggcctataagaatgaaatgcaagataacaca
tacccggaaattttgagatcgaatttgggcacagtggttttgcagttaaaaaaattaggc
attgacgatttggtacattttgactttatggatcccccagctcccgagactctgatgcgt
gctttggagctgttaaattatttagctgcattggatgatgacggcaatttaacagatttg
ggagctgttatgtctgaatttccattggatccacagttggcaaaaatgcttatagccagt
tgtcaacataattgttccaatgaaattttatctataacggctatgctgtcggtaccacaa
tgtttcgtcagacccaatgaggctaaaaaggctgcagacgaggccaaaaagcgttttgct
cacgttgatggtgatcatttgactttgctgaatgtgtatcatgccttcaaacagagcagc
gaggatccaaactggtgttacgagaactttatcaatttccgttctctaaagtcagcagat
aatgtgcggcaacaattggcccgaattatggatcgtttctatttgaaacgcagcagtacg
gatttcatttcaaaagactattacatcaatatacgaaaggcactggtccagggcttcttc
atgcaagttgcccatttggaacgcacaggtcattatttaaccatcaaggataatcaaatt
gtacaactacatccctcaacatgtttggaccataaacccgactgggttatttataatgaa
tttgtattgaccaccaagaactacatacgcactgtgacggatgtcaaacctgaatggtta
ttaactctgtcacctcagtactatgacttgaataactttccccattgtgaggccaagaga
caattggagatgctgcagcaacgtctggagtcgaaacaatttcaaaaaggattttaa
DBGET
integrated database retrieval system
