Stomoxys calcitrans (stable fly): 106096243
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Entry
106096243 CDS
T07664
Name
(RefSeq) endoribonuclease Dcr-1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
scac
Stomoxys calcitrans (stable fly)
Brite
KEGG Orthology (KO) [BR:
scac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
scac03036
]
106096243
Chromosome and associated proteins [BR:
scac03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
106096243
microRNA pathway
RISC loading complex
106096243
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Dicer_dsRBD
Dicer_platform
Ribonucleas_3_3
Dicer_dimer
PAZ
Helicase_C
Dicer_PBD
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
106096243
NCBI-ProteinID:
XP_013119344
UniProt:
A0A1I8NSI3
LinkDB
All DBs
Position
2:complement(56398195..56427357)
Genome browser
AA seq
2432 aa
AA seq
DB search
MSFHWCDNLHTAVFSPRDYQIELLAAAFERNTMICLGHKSAKEFIALKLLQELRREQRRS
SLNNKISVYLSSNNAPAMFTMLQHLTDLKVFQETTTNVIEELTQGFNVYILHPKTCLRLL
RKDNLKLNEIFLMILEDCHQDSVHKEIRHIFLEFYKTNCLSKMPKVLGLAGPLHSAGCQL
AELSAMLNSLEKTVQCRTETASDIVTVLRYCAKPFEYIVQCAPYNQDDLCYVLQDVLLTR
KAFLNDHRYDPFEIYCTDEFFEELKDIPDPKKEPLEFLDTMLQVLREMGPWSADRVAFNM
YQRIEKQKIKTPHERHYILLCLVNTALLEVHSICEQNFRKFKNNHKDCVESHSSPKVLRL
LEVLRLFKPEDNSSKNDTIKRISIELDQMDFQKLSRILETKCHSVEQAVEKQQLESRSIV
ENLDSIVKPEFQAKLSADLSENENKTQMSSKKVDEASQINSSAAGTTHRHSNHNRQKRRP
FRRHNRDHNDGVDTLCSIIFCNSSFTARVLFELLAEMSRHDADLKFIKCQFTTDRVADPI
TEPKEAETEHRRQEEVLKRFRMHDCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQ
CKGRARAVPAYHVVLVAADEDLTNHNLQAINEQLTDKSHRLLCGLPQDQESLLTDTEQSN
DEDNDDDRKINGVSTKQKFVYGSSKGTIKILNPEVITNKHPSKPSAGSNIVLKEIKEIAP
AIQNVGNGEISLKPVEELETMKSAGSTTENHFEREPQPNKATNNAINEPELDSNNTSTES
VIESNAHYEVYNLDMLLEEKNPTNIENITKIVSEVTKEMPSMRDSNVEESSQVLNANKQQ
ENTIEEVSKVIKDFEVFDLNELLKDDKISEKQEPIVAGGQPQQDEKMNNSPKKIKEQKYF
QCLLHDQETEIQDSGYLNSLDEMYRLENVKATTNAIVKQMAEYREIEKMLLQNCANTEPA
DNEHKEADVFNNCIKPYKPLAKLLTGAYVDLSNSIALVNKYCAKLPSDTFTKLTPLWRCA
HTVRNGTTMFQYTLRLPINSPLKYDIIGLPMPTHVLARRMTALQACIALHKSGELDNNLQ
PIGKEGFRPIEEDWENFDLEEQDEKIVQENAEPRPGTTKRRQYYYKRIASEFCDCRPTPG
LECFLYLLDLTLQCPIPEEQNTRGRKIYPPEDAFQAFGILTLKKIPKVSSFPIFTRSGEV
KVSLVLHPKRVVLTEANIACINTFINYTFTKVLRLKKFLMLFDPESTENCVFIVPTVKTE
DNSGKVIDWKFLELIEQNANMMPTPVPEETRHATKFSADKFKDAVVMPWYRNQDQPHYFY
VAEICHQLSPLSIFPSRKYKTFMHYYYLKYGLKIHPKQPLLDVDHTSARLNFLTPRYVNR
KGVALPTSSEATKRAKRENLELKQILVPELCTVHPFPASLWRTAVCLPCILYRINGLLLA
DDIRKKVVRDMGLGKPELPEDKEWPMLDFGWSLSDVLKRSKIQKIPPPGEEKVKCEASKK
DKETTADEKKTTITTQSNDEEVLNLGGAKTVNEIVEDAERKLLEEGAGFVEIGTWSNDMA
MNLEYKYRNSDSEEDEYDELLDGIIPAQVKLCGKSVRATSPTFVDIQLDAEDNGENASPQ
FKYYDSDESYAESSFASDAEMMDDDFGVDEDIWMDVDDIVLTSKNEAETIETEKDIEKLN
KQLSIIQDTKANERNYQETKNLQVGYNFPEVKAQIAEKLRDSIKDFRKSTKQFIEDIQSS
GMLVEYNQSIKLPEKKMANGPSKESPQMPELSLERYKRLILHIHENELKIKEILKEGTAK
HLLDVETLQALNKIYTQEHPNEVFIVEGCGDVFDSFNDIINMQVGENGEKCIALDFDSQG
KEYHVELCKYEAKISKQYPAHNFSFDYQPDLLTHPGPSPSIILTALTMSNANDGINLERL
ECIGDSFLKYAITTYLYITYDNVHEGKLSHLRSKQVANLNLYRLGRRKQLGEYMIATKFE
PNDNWLPPCYYVPKELEKALIEAKIPPHYWSLVNLVNIKKLTNAEICELVRQKAEEWGCN
IADTDDSADINGSKLDYEWDDPKNLPHEFSCFIPYNLVSQHSIPDKSVADCVEALIGAYL
IECGLRGALLFMAWLGIRVIPFERVPYDPKMPRVPGSTLPDADNMITVYGAWTPPKSPLL
HYTPNARDALDALLQGYEEFENILGYTFRDRSYLLQAMTHASYTPNRLTDCYQRLEFLGD
AVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFASLAVRHGFHKYFRHLSPGLNEVI
DRFVRIQTENGHSISEEYYLLSEEECDDAEDVEVPKALGDVFESVAGAIFLDSNMSLDAV
WHVYYNMMRPEIEQFSNSVPKSPIRELLELEPETAKFGKPEKLADGRRVRVTVEVFCKGT
YRGIGRNYRIAKCTAAKCALRQLKKKGLIEKR
NT seq
7299 nt
NT seq
+upstream
nt +downstream
nt
atgtccttccactggtgtgataatctgcatacagcagtttttagtcctcgggactatcaa
atagaactactggctgcagcattcgaacgcaacacaatgatttgtttgggccacaaatct
gccaaagaatttattgcgttaaaacttttgcaagagttgagacgagaacaacgccgctct
tcgctcaataacaaaataagtgtttatctcagctccaataatgcaccggcaatgtttacc
atgctacagcacctaaccgacttgaaggtgtttcaggaaaccacaacgaatgttattgaa
gagttgacacaaggattcaatgtttacattttacacccgaaaacatgtctgcgattgttg
aggaaagacaacctcaagctcaacgaaatatttcttatgattttggaagattgccatcag
gatagtgtccataaggaaatacgccatatatttctagagttttacaaaaccaattgtttg
tccaaaatgccaaaagtattgggtttagcaggtcccctgcatagtgctggctgccagtta
gcagaactgtcggctatgctcaatagcctggagaagacggtacaatgcagaacggaaaca
gcaagtgatattgtgacggtgttaaggtactgtgcaaaaccttttgaatatatagtgcaa
tgtgccccttacaatcaagatgatctatgctatgtgctgcaggatgtgttgctgacacgt
aaagcttttctcaatgaccatcgctatgatccatttgaaatatattgtaccgatgaattt
tttgaagaactcaaagacattccagatcctaaaaaagagcctcttgagtttctcgacacc
atgctgcaggtcttaagagaaatgggtccctggtccgcagatcgtgttgcgtttaatatg
taccaaagaatagagaagcaaaagattaaaacaccacatgagcggcattatatactctta
tgtttggttaatacggctttgttagaagtacattccatatgtgagcaaaattttcgcaaa
tttaagaataatcataaagactgtgttgagtcccattcgagtccaaaggtattacgacta
ttggaggtattgcgtctcttcaaacctgaagacaattccagcaaaaatgacaccataaaa
agaataagtatagaactggatcaaatggactttcaaaaactatcgcggatacttgagact
aaatgtcatagcgttgaacaagctgtggagaagcaacaattggaaagtcgttcaatagtg
gagaatttggattccatagtgaagccggaattccaagccaagttaagtgcagatttgagt
gaaaatgaaaataaaacccaaatgtcttccaaaaaagttgatgaagcgtcccaaatcaat
agctctgcagcaggtactactcatcgtcattcaaatcataatcgtcaaaaacgtagacct
tttcgtcgtcataatcgtgatcacaacgatggtgtggacacattgtgttccatcatattt
tgtaattccagttttacagctcgagtgctttttgagcttttggcagaaatgagcagacat
gatgctgatttgaaatttataaaatgtcaattcactactgatcgagtggctgaccccata
actgagcccaaagaggcggagacagagcatagacgtcaagaagaggtgctcaaacgattt
cgcatgcatgattgtaatgtgctaattggtacttcagttctggaggagggtattgatgtg
cccaaatgtaatttggtggtacgttgggatcctcccaccacctatcgtagttatgtacag
tgcaagggaagagcgagggctgtaccagcctaccatgtggtattggtggccgcagatgaa
gatcttactaaccataatctacaagccattaacgaacaattgacagacaaaagtcatcga
ttgctatgtggtctgccacaagatcaagagagtctgctaaccgatacggaacaatcaaat
gatgaggataatgatgacgacagaaaaatcaatggggtttccactaagcaaaaatttgtg
tacggctcaagtaagggaaccataaaaattttaaatcccgaagtgataaccaataaacat
ccttccaaaccctccgctggcagcaatattgttctaaaggagattaaagaaattgcacca
gctatacaaaacgttggtaatggggaaatatctctaaagcctgtggaagagctagaaacc
atgaagtcggccggcagtacaactgaaaaccactttgagcgggaaccacaacccaacaaa
gccactaataatgcaattaatgaaccggaattagattccaataacacttccaccgaatct
gtgatagaatcgaacgcacactatgaagtgtataatttagatatgctgcttgaagagaaa
aatccaacaaatatagaaaatataactaaaattgtgtccgaagtaacaaaagaaatgccc
agcatgagggattctaatgtagaagagagcagccaggttttgaatgccaacaaacagcaa
gaaaataccatagaagaggtatctaaagttataaaggactttgaagtttttgatttgaat
gaactcttaaaagacgacaagattagcgaaaagcaagaacctattgtcgctggtgggcaa
ccccaacaagatgaaaaaatgaacaactctccaaaaaagatcaaagaacaaaaatatttc
caatgtttactgcatgaccaagaaacggagatacaagactctggatatttaaatagctta
gatgaaatgtatagattagaaaatgtaaaagccactacgaatgctattgtcaaacaaatg
gccgaatatcgagaaattgaaaagatgcttttacaaaactgtgccaataccgaacctgcc
gacaatgaacacaaagaagccgatgtatttaataactgcattaaaccctacaaacctttg
gccaagttactaactggagcctatgttgatctcagcaattccatagccttagtgaataag
tattgtgccaaactaccaagtgatacatttacaaaacttactcctttgtggcgatgtgcg
cataccgtacgcaatggcaccaccatgtttcagtacactttaaggctgcccattaattct
cccctgaaatatgatattatcggcttgcccatgccaacgcatgtgttggcacgacgaatg
acggccctacaggcttgcatagctttgcataaatccggtgaactggataacaatcttcag
ccaattggtaaggagggctttcggccaatcgaagaagattgggaaaattttgatctcgag
gagcaggatgaaaaaattgtacaagaaaatgcagaacccagaccgggtacgaccaagcga
cggcagtattattacaaacggattgcttcagagttttgcgattgccgcccaacgcctggt
ttggaatgttttctctatttgttggatctcaccctgcagtgtcccatacctgaagaacaa
aatacaagaggacgtaaaatatatccacctgaggatgcctttcaagcttttggtatttta
actttaaagaaaatacctaaagttagttcgtttcccatattcactcgttccggagaggtt
aaagtctcattggtgctgcatcccaaacgggtagtgctaaccgaagcgaacatagcttgc
atcaatacattcatcaattacacattcaccaaagtcttgagactgaagaaatttttgatg
ctcttcgatcccgaatcgacggagaattgtgttttcatagtgcccactgtgaaaaccgaa
gataacagtggcaaagttatagactggaaatttttagagttgatagagcaaaatgctaat
atgatgccaacaccggtgccagaggagacacgtcatgcaaccaagttttcagcagacaaa
ttcaaggatgctgttgttatgccctggtatcgtaatcaagatcaaccccactatttctat
gtggccgaaatatgtcatcaactatcgccacttagtatatttccaagtcgaaagtataaa
acattcatgcattattactatttaaaatatggactgaagatacatcccaaacagccgctc
ttagatgtggatcacacaagtgctcgtttaaattttctgacaccacgctatgtgaaccgc
aagggcgttgcactgcctaccagttcggaggccacaaaaagggcaaagcgtgaaaatcta
gaattgaaacaaatactggtgccagaactttgtactgttcatccatttcctgcctctttg
tggcgcactgctgtatgtttaccctgcattttatatcgcatcaatggtttgttgttggca
gacgatatacgtaaaaaggtggtcagggacatgggtcttggtaaaccagaactaccagaa
gacaaggaatggcctatgctggattttggttggagtctcagtgatgtgttaaaaaggtcc
aaaattcaaaagattccacctcctggagaggagaaagtgaaatgcgaggcctcgaaaaaa
gacaaggaaacgactgccgatgaaaaaaagactactataacaactcaaagcaatgatgaa
gaagtccttaatcttggcggtgccaaaactgtgaatgaaattgtcgaagatgctgaacga
aagcttcttgaggaaggtgctggctttgttgaaatcggtacctggtcaaatgatatggcg
atgaaccttgaatataaatatcgcaattcagatagtgaggaagatgaatatgatgaacta
ttagatggaattataccagcccaagtaaaactgtgtggaaaatctgtaagagcaacctca
ccaacattcgttgacattcaattagatgcggaagataatggcgaaaatgcatcgccacag
tttaaatattacgattccgatgaatcgtatgccgagtccagttttgctagcgatgctgaa
atgatggatgatgattttggtgtggacgaagacatatggatggatgttgatgatattgta
ttgacctctaaaaatgaagccgaaaccatagaaacagaaaaagatatagaaaaactgaac
aaacaattgtccataatacaagataccaaagcgaatgaacgcaactatcaggaaaccaaa
aacttgcaggtgggttataattttcccgaggtaaaagcacaaatcgccgaaaagctaagg
gattccatcaaagactttagaaaatcaactaaacaatttatagaggatatacagagttcg
ggtatgctggtggagtacaatcagtcaattaaattgcctgagaaaaaaatggcaaatggc
ccctcaaaggagtcgccccaaatgcctgaactaagtttggaaagatataaaagacttata
ctccatatccatgagaatgaattaaaaattaaagaaattctaaaggaaggcacagcaaaa
catcttttggatgtggaaactctacaagctttaaataaaatctatacccaagaacatccc
aatgaagtgttcattgtggaaggttgtggagatgtattcgatagtttcaatgacatcatc
aatatgcaggttggagaaaatggtgaaaaatgcattgcattagactttgatagccaagga
aaggaatatcacgtggaattgtgcaaatacgaagcaaagatctcgaagcaatatcctgcc
cataactttagttttgattatcaaccagacctgttgacgcatcccggtcccagtcccagt
ataattttaactgccctcacaatgtccaatgccaacgatggcattaatttagaaagactt
gaatgtattggggattccttcctaaaatatgccattaccacttacctctatataacctat
gacaatgtgcacgagggcaaacttagtcatctacgttcgaaacaagtggcgaatttaaat
ctttaccgtttgggaaggcgaaaacaattgggggaatatatgattgcaacaaaatttgaa
cccaatgataactggctgccaccctgctattatgtgcccaaagagttggaaaaggctttg
attgaagccaaaataccaccacactattggagtttggtgaatttggtgaatataaaaaaa
ctaacaaatgccgagatatgtgagttggtgcggcaaaaggccgaagagtggggttgtaat
attgcggataccgatgactcagctgatataaatggttcaaaattagattatgaatgggat
gatccgaaaaatctaccacatgaattttcctgcttcattccctacaatttggtgtctcag
catagcatcccagataaatctgttgccgattgtgtggaagccttgataggagcctatctc
attgagtgtggattgcgaggagcacttttgtttatggcatggctgggtatacgagttata
ccatttgaacgagtgccttatgatcccaaaatgcctcgagttccaggtagcactttgccc
gatgccgataatatgataacagtgtacggtgcatggactcctcccaaatcaccgttacta
cactacactcccaatgcaagagatgcacttgatgctctgctgcaaggctatgaagaattt
gagaatattttgggttacacatttcgagatcgttcgtatttgctacaagcaatgacgcat
gcctcatatacaccaaatcgattgaccgattgttatcagcgtttggaattcctgggcgat
gcggtgttggactatctaattaccaggcatttgtatgaggatcccaggcaacattcacca
ggagctctgacagatttacgttcagctttagttaataacaccatattcgcttcgttggct
gtaagacatggcttccataaatatttccgacacttatctcccggcctaaatgaggttata
gatcgatttgtgcgtatacaaaccgaaaatggtcatagtataagcgaagagtattattta
ctatcggaagaagaatgtgacgatgccgaagatgtggaggtacccaaagccttgggtgac
gttttcgaatctgtagctggcgctatatttttggactccaatatgtccttagatgctgtg
tggcatgtatattacaatatgatgcgaccagaaatagaacagttcagcaattcagtgcca
aaatcacccatcagagaattgctggaacttgaacctgaaactgccaaatttggcaaacct
gaaaaacttgctgatggccgccgtgttcgtgtcacagtcgaagtgttttgcaagggtaca
tatcgtggcataggtagaaactatcgcattgccaaatgtactgctgccaaatgtgctcta
cgtcaattaaagaaaaaggggctaattgaaaaacgttag
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