Stomoxys calcitrans (stable fly): 106096280 Help Entry 106096280         CDS       T07664                                  Name (RefSeq) collagen alpha-1(I) chain   KO K19719   collagen type II alpha Organism scac  Stomoxys calcitrans (stable fly) Pathway scac04512   ECM-receptor interaction scac04518   Integrin signaling Brite KEGG Orthology (KO) [BR:scac00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     106096280    04518 Integrin signaling     106096280  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:scac00536]     106096280 Glycosaminoglycan binding proteins [BR:scac00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    106096280 SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI VWC_Sas VWC TILa Motif Other DBs NCBI-GeneID:  106096280 NCBI-ProteinID:  XP_013119386 UniProt:  A0A1I8NTN0 LinkDB All DBs Position 5:3964013..3976724 Genome browser AA seq 1552 aa AA seqDB search MHLKHLKLFWLFITICVLVTFVTAEPEGKSKSKDKHAKKVKKVRLRKKVHLDRPLGDEPK EELPDASLDDLENYDYSNYDDDLGAEVDQFESHSEVVTSSTTSSSTRNLMTSNVIGAFSC HFEGNWYRDNDEFTSEQNNCSHNCVCKEGKIRCSPSDDCTPALGPPINVQPADERPSTTE RAAVQSATPTAYIPYESAVGPRGDRGYPGAQGPAGESGMPGTPGNPGVPGSPGPPGPVPD MSYYHQQLAAEYASSDKGPNAAPFVAPTFIPPAGQPGPRGPPGNVGPQGPQGFQGTRGEP GEAGLQGPTGAMGPRGLPGPPGKDGMPGEDGEAGPAGNAGSPGPRGMPGLPGQPGLKGHR GLPGVDGSKGDAGAPGEKGSAGVMGPVGPVGPTGPAGPRGERGREGAPGQAGARGLDGNP GAPGQPGSVGKPGPPGFTGIPGAKGDMGYMGPKGDQGLQGPRGEAGRPGAPGENGMPGPA GKDGSPGDKGSMGAPGIAGPQGFPGPRGPDGLPGSQGEPGIKGAPGQPGERGYKGDQGIK GEAGQPGPRGLPGTVGPEGKRGKRGMRGPTGPAGPTGERGSPGLPGLPGPDGPVGPKGNP GDRGIQGPPGVKGSNGDIGPPGLPGLQGLRGLPGRVGPDGRDGPPGERGIPGADGKPGEQ GPQGLQGLPGPMGIPGDKGIPGEPGKAGEPGAAGPPGPRGDNGKDGLPGAQGPPGPQGQD GQRGEAGPTGPRGFQGLPGALGSPGAPGKDGAHGPPGPQGQIGPVGLRGERGYPGERGPV GQPGTPGERGEPGNPGHDGPPGLTGKQGEKGHMGAPGMMGLPGQKGLPGPSGIKGDRGST GPIGPEGSPGRPGDRGPQGNVGPPGAPGEPGERGSNGNPGTPGEQGSAGVPGERGPIGPA GPPGFPGAPGIAGLPGAKGDRGLMGIKGSQGNTGPQGQPGEQGQPGPIGLTGPKGARGET GLRGEPGISGLPGRPGEMGPVGQPGSPGQPGMAGPQGLKGNAGEPGRAGLPGSPGLQGPP GLEGQKGETGNDGPTGAPGNPGPQGPTGDRGIPGLPGPPGAAGLRGMRGPVGEPGQQGKP GKDGPPGPQGLVGPQGNPGPAGEQGPVGAAGKQGPPGIQGRPGDKGPPGQQGNQGPAGNP GQPGQPGPMGPAGPHGERGSKGETGLPGVEGPMGPRGKPGPPGHEGPKGETGEPGPKGIK GHRGLIGLQGMPGTPGLKGDVGPSGMPGAPGKPGEMGMRGPQGRDGNIGPQGQPGPAGPR GFSGHDGKPGPMGPSGPPGPPGPPGETLGYDVAALTALLSQGQTKGVDVMDDQPMIDKLT EGLSDDERHALVMKAFDHVRASFERFKKPNGQQSAPARTCRDLYAAYPDFKSGEYWIDPN EGDAQDAILVRCEKENRATCILPQPKESNVLSYTGDDKEIWLGEMAGGMDINYKADSNQM GYLQLLSAKASQKITFHCRNTVAYMDDEENSARNGLKLLTWNDAELTPKGPQRLRFEAEM DECRKRSNTWAKTIVTYTTQKTQRLPIVDIAIRDVGAANQQFRVQLGPACFY NT seq 4659 nt NT seq  +upstreamnt  +downstreamnt atgcatttgaaacatttaaaactattctggctgttcatcacaatttgtgttcttgtgacc tttgtaacagccgaaccagaaggcaaatccaaaagcaaggacaagcatgcaaagaaagtg aaaaaggtgcgcctgcgcaagaaggtgcatttggatagacccctaggagatgaacccaaa gaagaattgccagatgccagtttggatgatttggaaaattatgattacagtaattatgat gatgatctgggtgcagaagttgatcaatttgaatcgcatagtgaagttgtcacttcgtct accacctcgtctagcacccgcaatctcatgacctcgaatgtcattggagccttctcatgc cactttgagggcaattggtatcgcgataatgatgagtttaccagcgaacaaaacaattgc agccataattgtgtgtgcaaggagggcaagataagatgcagtccttcggatgactgtacc cccgcattgggtccccccatcaacgttcagccagccgatgagaggccttcgacaacggaa agagctgctgtgcaatcggctacacccactgcctatattccttatgagtcagcggttggt cctcgtggtgataggggttatccaggagctcaaggtccggctggagagtctggtatgcct ggtacccccggcaatcctggtgttcccggaagtcctggccctcctggtcctgttcccgat atgagctattaccatcagcaattggctgctgaatatgccagctccgataaaggtcctaac gcagctccttttgtggctcccacatttataccacccgcaggtcaaccgggacctcgcggt cctcctggtaatgtgggccctcaaggccctcaaggttttcaaggcactcgtggtgaacct ggcgaggccggtcttcaagggccgactggtgctatgggtcccagaggtttgcctggtcct cctggtaaggatggcatgcctggcgaagatggtgaagctggtcccgcaggtaatgcagga tctcctggtcctcgtggtatgcccggtcttcctggccaacctggattaaaaggacatcgt ggtttgcccggcgtggatggttctaaaggtgatgctggtgctcctggtgaaaagggctct gctggtgttatgggacccgtaggacctgttggacccactggtcctgctgggcctcgtgga gaacgtggtcgtgaaggtgcccctggtcaggccggcgccagaggtttggatggcaatccc ggtgctcctggtcagcctggttcggtaggcaaacctggaccaccaggtttcactggcatt cctggtgccaaaggtgatatgggttatatgggccccaaaggtgaccaaggtctgcaaggt cctcgtggtgaagctggccgccctggtgctcccggagaaaatggtatgcctggtcccgca ggaaaagatggctcacctggcgataaaggttcaatgggtgctcccggaattgctggacct caaggttttcccggaccaaggggtcccgatggcttacccggcagccagggcgaacctgga atcaaaggtgctcccggacaacctggtgaaagaggctacaaaggcgatcaaggcataaag ggcgaggcaggtcaaccaggcccccgtggtttacccggcacagttggccctgaaggaaaa cgtggcaaacgaggtatgcgtgggcctacaggccccgccggtcccactggcgaaagaggt tcgcctggtcttcctggtctccccggccctgatggtcccgtcggccccaaaggcaatcct ggagatagaggtattcaaggtcctcccggagtgaaaggcagcaatggtgatattggacct ccagggttgcctggtctacaaggtttgcgtggtctgcccgggcgagttggccccgatggc agagatggcccccctggcgaaagaggtattcccggtgctgatggaaaacccggcgaacaa ggtccacaaggtttacaaggcttgccaggaccgatgggtattcccggcgacaaaggtatt cctggcgaacccggtaaagctggtgaacctggtgctgcaggccccccaggaccacgtggt gataatggcaaagatggcttaccaggcgcccaaggacccccaggcccacaaggtcaagat ggacaacgaggtgaagcgggaccaactggtcccagaggctttcaaggtttgcctggggca cttggtagccctggtgctcctggaaaggatggtgctcatggtccccctggccctcagggt caaataggtccggtcggcttaagaggagagagaggctatcctggcgaaagaggtcctgtt ggacagccaggcacacccggtgaaagaggagaaccaggaaatcctggacatgatggtcct cctggtctaacgggaaaacaaggcgaaaaaggtcacatgggtgctccaggcatgatgggt ttacccggccaaaaaggattgcctggtccatctggtattaaaggtgatcgtggcagtact ggtcctattggcccagagggatctcctggtcgccctggtgatcgtgggcctcaaggcaat gtcggcccacccggtgctcccggcgaacctggtgagagaggtagcaatggaaatcctggt actcccggcgaacaaggatcagctggtgttcctggtgaacgaggccccattggtccagct ggacctcccggattccctggtgctcccggaattgctggtctacctggcgccaaaggcgat cgcggattaatgggaatcaagggatcccaaggcaatacaggacctcaaggacaacctggt gaacaaggccaacctggcccaattggtttgactgggcccaaaggtgctcgcggtgaaact ggtcttagaggtgagcctggtataagcggtttgcccggaagacctggagagatgggacct gttggacaaccaggcagtccaggtcaacccggtatggctgggcctcagggtcttaaaggt aatgcaggagaaccaggacgtgccggattgccgggaagtccaggtttgcagggacctcct ggcttggaaggtcaaaaaggagaaactggcaatgatggacccacaggtgccccaggaaat cctggcccacaaggccctacaggtgatcgcggtattccaggtttacctggacccccgggc gcagccggcttaagaggtatgagaggtccagtgggagaaccaggacaacaaggtaaaccc ggtaaagatggtccacctgggcctcaaggcttggtgggaccccaaggcaatcccggcccc gcaggagaacaaggacctgttggtgcagcaggcaaacaaggcccacctggcattcaaggc agaccaggagataagggacctcccggtcaacaaggaaatcaaggacctgctggcaatcct ggtcagcccggacaaccaggacccatgggtcctgcaggtccacatggagaacgtggttct aaaggtgaaacaggactgccaggtgtggaaggaccaatgggccccagaggcaaaccagga cccccaggacatgaaggacccaaaggagaaaccggagaacctggccccaaaggcatcaaa ggtcaccgaggtttgattggtttgcaaggtatgccaggaactcccggtttaaagggagat gttggtccatcaggtatgccaggagctcctggtaagccaggtgaaatgggtatgagaggt ccccagggcagagatggcaatattggtccacaaggtcaacctgggccagctggacctaga ggcttcagtggacatgatggcaaacctggccccatgggtccatctggaccccccggtcca ccaggtcctccaggagaaactctgggctatgatgtggccgcacttactgctcttctcagc cagggccaaacaaagggtgttgatgtaatggacgatcaaccaatgatcgataagctaacc gaaggcctatccgatgacgaaaggcatgccctggtgatgaaggcgttcgatcatgtcaga gcctcattcgaaagatttaagaaaccaaatggtcagcagtctgctccagccagaacttgt cgagatctgtatgcggcctatccagatttcaaatccggagaatattggattgatcccaat gagggtgatgctcaggatgccatactggtgcgttgtgaaaaagaaaaccgggccacatgc atattgccacaacctaaggaatcgaatgtactgagctacaccggagacgacaaggaaata tggttgggagaaatggccggaggaatggacatcaactacaaggccgattccaatcaaatg ggttacctacagttgctgtcggccaaggcatcccagaaaatcaccttccattgtcgaaac actgtggcctacatggatgatgaggaaaattcagcacgaaacggcttgaagttattaacc tggaatgatgccgaactaacaccaaagggaccacagagactgcgtttcgaagccgaaatg gatgagtgcagaaaacgttccaatacctgggccaagaccattgtcacctatacaactcaa aagacccagagactgccaatcgtggacatagccattagagatgtgggtgcggctaatcaa caattccgtgtgcaactaggcccagcatgtttctattag

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