Streptomyces cadmiisoli: DN051_06830
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Entry
DN051_06830 CDS
T07301
Name
(GenBank) ABC transporter
KO
K03701
excinuclease ABC subunit A
Organism
scad
Streptomyces cadmiisoli
Pathway
scad03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
scad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DN051_06830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scad03400
]
DN051_06830
DNA repair and recombination proteins [BR:
scad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DN051_06830
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DN051_06830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
ABC_tran
AAA_21
AAA_29
AAA_16
DnaJ_CXXCXGXG
nSTAND1
RsgA_GTPase
AAA_25
Anti-TRAP
AAA_33
AAA_22
NACHT
Viral_helicase1
MeaB
AAA_18
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
AWW36385
UniProt:
A0A2Z4IU50
LinkDB
All DBs
Position
1663589..1665931
Genome browser
AA seq
780 aa
AA seq
DB search
MSDPHDPCVRVRGAREHNLRGVDVDIPRNRLTVFTGVSGSGKSSLAFGTIYAEAQRRYFE
SVAPYARRLIHQVGAPKVAEITGLPPAVSLEQRRSAPTSRSSVGTVTNLSNSLRMLYSRA
GDYPPGAPRLDSDAFSPNTAAGACPHCQGLGRVHRTTEELLVPDPSLSIREGAIAAWPGA
WQGKNLRDILDTLGHDVDRPWRELPAEQREWILFTDEQPVVTVHPVRDADRIQRPYQGTY
MSARRYVLKTFADTRSATLRAKAERFLTSAPCPVCGGSRLRPEALAVTFAGRTIAELAAL
PLSGLADELVATDEASRVLTDDLRSRIAPVVELGLGYLSLDRATPTLSAGELQRLRLATQ
LRSGLFGVVYVLDEPSAGLHPADTEALLTVLERLKSAGNSVFVVEHHLEVVRGADWVVDV
GPLAGEHGGQVLYSGPVPGLASVPESATARFLFDDSPVPAREVRVPRDWLRVGPVTRHNL
RGVTADFPLGVFTAVTGVSGSGKSTLIGEITEDLAGVGRLVSVDQRPIGRTPRSNLATYT
GLFDVVRKVFAGTAAARERGYGVGRFSFNVAGGRCETCQGEGFVSVELLFLPSTYAPCPE
CGGARYNAGTLEVTYRGRTIAEVLDLTVEAASDFFADTPQVSRSLGTLMRVGLGYLRLGQ
PATELSGGEAQRIKLASELQRGRRGRTLYLLDEPTTGLHPADVRVLMRQLHGLVDAGHTV
VVVEHDMSVVADADWVIDMGPGGGDAGGRIVAAGPAVEVARATDSSTARHLAGALAPGTV
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatccgcacgacccctgtgtccgcgtccgcggcgcccgcgagcacaacctcagg
ggcgtggacgtcgacatcccccggaaccggctgaccgtgttcaccggtgtgtccgggtcg
ggaaagtcgtcactggcgttcggcacgatctacgcggaggctcagcggcgctacttcgag
tccgtcgccccgtacgcgcgccggctgatccatcaggtcggcgcaccgaaggtcgccgag
atcaccgggctgccgcccgccgtgtcgctggagcagcgccgctcggcgccgacgtcgcgc
tcgtccgtgggcacggtcaccaatctgtcgaactcgctgcggatgctctactcccgggcc
ggggactaccccccgggggcaccgcgtctcgactcggacgccttctcccccaatacggcg
gccggcgcgtgcccgcactgccagggcctcgggcgggtgcaccggacgaccgaggagttg
ctggtccccgacccgtcgctgtcgatccgcgagggcgcgatcgccgcgtggccgggcgcc
tggcagggcaagaacctgcgtgacatcctcgacacgctgggccacgacgtggaccggccg
tggcgcgagctgcccgccgagcagcgggagtggatcctgttcacggacgagcagccggtg
gtcaccgtgcacccggtgcgcgacgccgatcggatccaacggccgtaccagggcacgtac
atgagcgcccggcggtatgtgctgaagaccttcgcggacaccaggagcgccaccctgcgg
gccaaggcggagcggttcctcaccagtgcgccctgcccggtctgcggcggcagccggctg
cgccccgaggcgctggcggtgaccttcgccggccgtacgatcgcggaactcgccgcgctg
ccgctgagcgggctcgccgacgaactggtcgccaccgacgaggcgtcgcgggtcctcacc
gacgacctccggtcccggatcgcgccggtcgtcgagctcggtctcggctatctcagcctg
gaccgcgccaccccgaccctgtccgcgggcgagctgcaacggctgcggctggcgacccag
ctgcgctccgggctgttcggggtcgtctacgtcctcgacgagccgtccgcggggctgcac
ccggcggacaccgaggccctgctgacggtgctggagcggctgaagtcggccggcaactcg
gtgttcgtggtggagcaccatctggaggtggtgcgcggcgccgactgggtcgtcgacgtc
ggtccgctcgccggggagcacggcggtcaggtgctgtacagcggtccggtaccggggctg
gcctcggtaccggagtcggcgacggcccggttcctgttcgacgactcccccgtcccggca
cgcgaagtgcgtgtgccgcgcgactggttgcgggtcggtccggtcacgcggcacaacctg
cgcggggtgacggcggacttcccgctcggtgtgttcacggcggtgaccggagtgtcgggt
tcggggaagtcgacactgatcggggagatcacggaggacctggccggtgtcggccgcctc
gtctcggtggaccagcggccgatcgggcggacaccgcgctcgaacctcgcgacgtacacc
ggactcttcgacgtcgtgcgcaaggtgttcgccggcaccgcggcggcccgtgaacgcggc
tacggggtcggccggttctcgttcaacgtggccggagggcggtgcgagacatgtcagggc
gaggggttcgtcagcgtggaactgctgttcctgccgagcacctacgcgccctgcccggag
tgcggcggggcgcgctacaacgccgggacgctggaggtcacgtaccggggccggaccatc
gccgaggtgctggacctgaccgtcgaggcggcgtcggacttcttcgcggacacgccgcag
gtgtcccgcagcctcggcacgctgatgcgggtggggctcggctatctgcggctcggccag
cccgcgacggagctgtccggcggggaggcccagcgcatcaagctggcgagcgagttgcag
cgcggccgccgcggccgcaccctctacctcctcgacgaaccgacgaccggactccacccg
gccgacgtgcgggtcctgatgcggcagctgcacggcctggtcgacgccgggcacacggtg
gtcgtcgtcgagcacgacatgtccgtggtcgcggacgccgactgggtgatcgacatgggg
ccgggcggcggggacgcgggcggcaggatcgtggcggcgggtccggccgtggaagtggcc
cgcgcgacggacagcagcacggcacgccacctggccggggcgctggcgccgggcaccgtc
tga
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