Streptomyces cadmiisoli: DN051_10790
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Entry
DN051_10790 CDS
T07301
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
scad
Streptomyces cadmiisoli
Brite
KEGG Orthology (KO) [BR:
scad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scad03016
]
DN051_10790
Enzymes [BR:
scad01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
DN051_10790
Transfer RNA biogenesis [BR:
scad03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
DN051_10790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
AWW37058
UniProt:
A0A2Z4IWU8
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All DBs
Position
2579055..2580368
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AA seq
437 aa
AA seq
DB search
MTDAQDTAADTSLRTPGGAPPDDGGTSAAGAPDPSPSPTPIPLLEPREGIPPVIADETAL
AEVIAAFAAGSGPVAVDAERASGYRYGQRAYLVQLRREGAGTALIDPVACPDLSGLGEAL
SGVEWVLHAATQDLPCLREIGMLPTALFDTELAGRLCGFPRVGLGAMVEGVLGFVLEKGH
SAVDWSTRPLPEPWLRYAALDVELLVDLRDALEKELDRQGKLEWARQEFAAIVAAPPPEP
RKDPWRRTSGMHKVRRRRQLAVVRELWQARDRIAQRRDVSPGKVLSDAAIVEAALSMPSQ
VHALSALNGFGHRVGRRQLEQWQAAVDRARALPESHLPQPGQPVTGPPPPRAWADKDPAA
AARLSAARAGVSALAEQLNLPQENLIAPDSVRRVCWEPPAGSDADGVAAALAGYGARPWQ
VELVTPVLVTALAAKVP
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacgcccaagacaccgcagcagacacttcactgcgaacccccgggggcgcccct
ccggacgacggcggaacttctgcagcaggggcgcccgacccgtcaccgagcccgacgccg
atccctttgctggagccgcgcgagggcattccgcccgtgatcgccgacgagaccgccctc
gccgaggtgatcgccgccttcgccgccggctccggcccggtcgccgtggacgccgagcgg
gcctccggctaccgctacggccagcgggcctacctggtgcagctgcgccgggagggcgcg
ggcaccgcgctgatcgacccggtggcctgtcccgatctgtcggggctcggcgaggcgctg
tccggcgtcgagtgggtgctgcacgccgccacccaggacctgccgtgcctgcgggagata
ggcatgctccccacggcgctgttcgacaccgagctggccggacggctctgcgggttcccg
cgggtcggtctgggcgccatggtcgagggcgtgctgggcttcgtgctggagaaggggcac
tcggcggtcgactggtccacccgtcccctccccgagccctggctgcgctacgcggccctg
gacgtcgaactgctcgtcgacctgcgggacgccctggagaaggagctggaccggcagggc
aagctggagtgggcccggcaggagttcgcggcgatcgtggccgcaccgccgccggagccc
cgcaaggacccctggcgccgtacgtccgggatgcacaaggtgcgccggcggcggcagctc
gccgtggtgcgggaactgtggcaggcccgggaccggatcgcgcagcgccgggacgtctcg
cccggcaaggtgctctcggacgcggccatcgtggaggccgcgctgtccatgccgtcccag
gtgcacgccctgtccgcgctgaacgggttcgggcaccgggtggggcggcggcagctggag
cagtggcaggccgcggtggaccgggccagggcgctgcccgagtcgcacctcccgcagccg
gggcagccggtgaccggtccgccgccgcccagggcgtgggcggacaaggatccggcagcg
gcggcgcggctgtccgcggcgcgggccggcgtctccgcgctcgccgagcagctcaacctg
ccgcaggagaatctgatcgcgccggactcggtccgccgggtgtgctgggagccgccggcc
ggctcggacgcggacggcgtcgccgcggcgctggccggatacggcgccaggccgtggcag
gtcgagctggtcaccccggttctggtgaccgccctggccgcgaaggtgccgtaa
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