Streptomyces cadmiisoli: DN051_16750
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Entry
DN051_16750 CDS
T07301
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
scad
Streptomyces cadmiisoli
Pathway
scad03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
scad00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DN051_16750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scad03021
]
DN051_16750
03400 DNA repair and recombination proteins [BR:
scad03400
]
DN051_16750
Enzymes [BR:
scad01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DN051_16750
Transcription machinery [BR:
scad03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
DN051_16750
DNA repair and recombination proteins [BR:
scad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
DN051_16750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
AWW38098
UniProt:
A0A2Z4IZT2
LinkDB
All DBs
Position
complement(3954063..3955085)
Genome browser
AA seq
340 aa
AA seq
DB search
MLIAQRPSLTEEVVDEFRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTDLILNIKQLVVSSEHDEPVVMYLRKQGPGLVTAADIAPPAGVEVHN
PDLVLATLNGKGKLEMELTVERGRGYVSAVQNKQVGQEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLIVDVETKQAMRPRDAMASAGKTLVELFGLARELNIDAEGIDMGPSPTD
AALAADLALPIEELELTVRSYNCLKREGIHSVGELVARSEADLLDIRNFGAKSIDEVKAK
LAGMGLALKDSPPGFDPTAAADAFGADDDADAGFVETEQY
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgctgatcgctcagcgtccctcgttgaccgaagaggtcgtcgacgaattccgctcccgg
ttcgtgatcgagccgctggagccgggcttcggctacaccctcggcaactccctccgccgg
accctgctgtcctcgatcccgggtgcggcggtcacgtccatccgtatcgacggcgtgctg
cacgagttcaccaccgtgccgggcgtcaaggaggacgtcaccgacctgatcctcaacatc
aagcagctggtcgtctcctcggagcacgacgagccggtcgtgatgtacctgcgcaagcag
ggcccgggtctggtcaccgccgccgacatcgcgccgccggccggtgtcgaggtgcacaac
cccgacctggtcctcgccacgctcaacggcaagggcaagctggagatggagctcacggtc
gagcgcggccgcggctacgtctccgccgtgcagaacaagcaggtgggccaggagatcggc
cgtatcccggtcgactccatctactcgccggttctgaaggtcacgtacaaggtcgaggcc
acgcgtgtcgagcagcgcaccgacttcgacaagctgatcgtcgacgtcgagaccaagcag
gcgatgcgtccgcgtgacgccatggcctccgccggtaagacgctggtcgagctgttcggt
ctcgcccgcgagctgaacatcgacgccgagggcatcgacatgggtccgtccccgacggac
gccgcgctcgccgccgatctggcgctgccgatcgaggagctggagctcaccgttcggtcg
tacaactgcctcaagcgcgagggcatccactccgtgggtgagctcgtcgcccgctccgag
gccgacctgctcgacatccgcaacttcggtgcgaagtcgatcgacgaggtcaaggcgaag
ctggccggcatgggcctggccctgaaggacagcccgcccggattcgacccgaccgccgcc
gccgacgccttcggcgccgacgacgacgcggacgccgggttcgtggagaccgagcagtac
tga
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