Streptomyces cadmiisoli: DN051_16965
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Entry
DN051_16965 CDS
T07301
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
scad
Streptomyces cadmiisoli
Pathway
scad03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
scad00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DN051_16965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scad03021
]
DN051_16965
03400 DNA repair and recombination proteins [BR:
scad03400
]
DN051_16965
Enzymes [BR:
scad01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DN051_16965
Transcription machinery [BR:
scad03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
DN051_16965
DNA repair and recombination proteins [BR:
scad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
DN051_16965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
TarH
Motif
Other DBs
NCBI-ProteinID:
AWW38133
UniProt:
A0A2Z4J100
LinkDB
All DBs
Position
complement(3985103..3989002)
Genome browser
AA seq
1299 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRQWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITYVDEERRTRDLPSLEAHVSVERQQIEQRRDADLEARAKKLEAD
LAELEAEGAKADVRRKVREGAEREMKQLRDRAQREIDRLDEVWNRFKNLKVQDLEGDELL
YRELRDRFGTYFDGSMGAAALQKRLESFDLEEEAERLREIIRTGKGQKKTRALKRLKVVS
AFLQTSNSPKGMVLDCVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSARSVIVVGPQLKLHQCGLPKAMALELFKPFVMKRLVDLNHAQNIKSAKRMVERGR
TVVYDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQIHPLVCTAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILKPADGRPVTMPTQDMVLGLYFLTTDAEGREIKGT
DRPFSSVAEAIMAFDAGELSLQAPVDIRFPVGTIPPRGWEPPVREEGEPEWQQGDSFTLK
TTLGRALFNELLPEDYPFVDYEVGKKQLSQIVNDLAERYPKVIVAATLDNLKASGFFWAT
RSGVTVAISDVVVPEAKREIVKGYEAQDEKVQKQYERGLITKDERTQELIAIWTKATNEV
AEAMNENFPKTNPIFMMVSSGARGNMMQMRQIAGMRGLVSNAKNETIPRPIKASFREGLS
VLEYFISTHGARKGLADTALRTADSGYLTRRLVDVSQDVIIREEDCGTDRGLRLQIAARG
GDGTLIKAEDVETSVYARCLAEDIVVDGKVLAPAGTDLGDVLIDELIRYGVAEVKTRSVL
TCESAVGTCAMCYGRSLATGKLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDIT
QGLPRVVELFEARTPKGVAPISEASGRVRIEETEKTKKIVITPDDGSDETAYPISKRARL
LVSEGEHVEVGQKLTVGATNPHDVLRILGQRAVQVHLVGEVQKVYNSQGVSIHDKHIEII
IRQMLRRVTIIESGDAELLPGELVERSKFETENRRVVQEGGHPASGRPQLMGITKASLAT
ESWLSAASFQETTRVLTDAAINAKSDSLIGLKENVIIGKLIPAGTGLSRYRNIRVEPTEE
AKAAMYSAVGYDDIDYSPFGTGSGQAVPLEDYDYGPYNQ
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtcaacttcttcgacgagctccggatcggcctggccaccgctgacgacatc
cgtcagtggagccacggcgaggtcaagaagcccgagaccatcaactaccgcaccctcaag
cccgagaaggacggactcttctgcgagaagatcttcggtccgacccgggactgggagtgc
tactgcggcaagtacaagcgcgttcgcttcaagggcatcatctgcgagcgctgtggcgtc
gaggtcacgcgcgccaaggtgcgccgtgagcggatgggccacatcgagctggccgccccc
gtcacgcacatctggtacttcaagggcgttccgtcgcggctgggctacctgctcgacctc
gccccgaaggacctggagaaggtcatctacttcgctgcgtacatgatcacgtacgtcgac
gaggagcgccgtacgcgcgacctgccctcgctggaggcccacgtctccgtcgagcgccag
cagatcgagcagcgccgtgacgccgacctggaggcccgtgccaagaagctcgaggccgac
ctggccgagctggaggccgagggtgccaaggccgacgtgcgccgcaaggtgcgcgagggc
gccgagcgcgagatgaagcagctgcgcgaccgcgcccagcgcgagatcgaccgtctcgac
gaggtgtggaaccgcttcaagaacctcaaggtccaggacctggagggcgacgagctgctc
taccgcgagctgcgtgaccgcttcggcacgtacttcgacggttcgatgggtgccgcggcg
ctgcagaagcgcctggagtccttcgatctggaggaggaggccgagcgcctccgcgagatc
atccgcaccggcaagggccagaagaagacccgtgcgctgaagcggctgaaggtcgtgtcc
gcgttcctgcagacctccaacagccccaagggcatggtcctcgactgcgtcccggtgatc
ccgccggacctgcgtccgatggtgcagctggacggtggccgcttcgcgacctccgacctc
aacgacctgtaccgccgtgtgatcaaccggaacaaccgactgaagcggcttctcgacctc
ggcgcgcccgagatcatcgtgaacaacgagaagcgcatgctccaggaggccgtcgacgcg
ctgttcgacaacggccgccgcggccgtccggtcaccggtccgggcaaccgcccgctgaag
tccctcagcgacatgctgaagggcaagcagggtcgtttccgtcagaacctgctcggcaag
cgagtcgactactcggcgcgttccgtcatcgtcgtcggcccgcagctcaagctgcaccag
tgcggtctgcccaaggccatggcgctggagctcttcaagccgttcgtgatgaagcgtctg
gtcgacctgaaccacgcgcagaacatcaagagcgccaagcgcatggtcgagcgcggccgc
acggtcgtgtacgacgtgctggaagaggtcatcgcggagcacccggttctgctgaaccgt
gcgcccacgctgcaccgcctcggcatccaggccttcgagccgcagctggtcgagggcaag
gccatccagatccacccgctcgtctgcaccgcgttcaacgcggacttcgacggtgaccag
atggccgtgcacctgccgctgtccgcggaggcgcaggccgaggcccgcatcctcatgctg
tcctcgaacaacatcctcaagcccgccgacggccgtccggtgacgatgccgacccaggac
atggtgctgggtctgtacttcctcaccaccgacgccgagggccgcgagatcaagggcacc
gaccgcccgttctcctcggtcgccgaggcgatcatggcgttcgacgccggcgagctctcg
ctccaggcgccggtcgacatccgcttcccggtgggcaccatcccgccgcgtggctgggag
ccgccggtccgtgaggagggcgagccggagtggcagcagggtgacagcttcacgctgaag
accacgctcggccgtgccctcttcaacgagctgctgcccgaggactacccgttcgtcgac
tacgaggtcggcaagaagcagctctcccagatcgtcaacgacctggccgagcgctacccg
aaggtcatcgtggcggcgacgctcgacaacctgaaggcgtccggcttcttctgggccacc
cgttccggcgtcaccgtcgccatctccgacgtcgtggtccccgaggccaagcgggagatc
gtcaagggctacgaggcccaggacgagaaggtccagaagcagtacgagcgcggtctgatc
accaaggacgagcgcacgcaggagctcatcgcgatctggaccaaggcgaccaacgaggtc
gccgaggcgatgaacgagaacttcccgaagaccaacccgatcttcatgatggtgagctcg
ggcgcacgaggcaacatgatgcagatgcgtcagatcgccggtatgcgtggtctggtgtcg
aacgcgaagaacgagacgatcccgcgtccgatcaaggcgtcgttccgtgagggtctgtcc
gtgctggagtacttcatctccacgcacggtgcccgtaagggtctggcggacaccgcactg
cgtaccgccgactcgggttacctgacccgtcgtctggtcgacgtctcgcaggacgtgatc
atccgcgaggaggactgcggcaccgaccgcggtctgcgtctgcagatcgccgcccgcggc
ggcgacggcacgctgatcaaggccgaggacgtcgagacgtccgtgtacgcgcgctgcctc
gccgaggacatcgtcgtcgacggcaaggtgctggccccggccggtaccgacctgggcgac
gtgctcatcgacgagctgatccgctacggcgtcgcggaggtcaagacccgctcggtcctg
acctgcgagtccgccgtcggtacctgcgcgatgtgctacggccgctcgctggccaccggc
aagctggtcgacatcggtgaggcggtcggcatcatcgccgcccagtccatcggtgagccc
ggtacccagctgacgatgcgtaccttccacaccggtggtgtggccggtgacgacatcacc
cagggtctgccgcgtgtcgtcgagctcttcgaggcccgtaccccgaagggtgtcgccccg
atctccgaggcctccggccgcgtgcggatcgaggagaccgagaagaccaagaagatcgtc
atcacgccggacgacggcagcgacgagacggcgtacccgatctcgaagcgcgcccgactc
ctggtcagcgagggcgagcacgtcgaggtgggccagaagctcaccgtgggtgccaccaac
ccgcacgacgtgctgcgcatcctgggccagcgtgccgtccaggtccacctggtcggcgag
gtccagaaggtctacaactcgcagggtgtgtcgatccacgacaagcacatcgagatcatc
atccggcagatgctgcgccgtgtgacgatcatcgagtccggcgacgccgagctgctgccc
ggcgagctggtcgagcggtcgaagttcgagaccgagaaccgtcgtgtggtccaggagggc
ggtcacccggcctccggtcgtccgcagctgatgggtatcaccaaggcctcgctggcgacc
gagtcgtggctgtcggcggcgtccttccaggagacgaccagggttctgacggacgcggcg
atcaacgccaagtccgactccctgatcggcctcaaggagaacgtcatcatcggtaagctc
atcccggccggtacgggtctgtcccgctaccgcaacatccgggtggagccgaccgaggag
gccaaggccgcgatgtactcggccgtcggctacgacgacatcgactactcgccgttcggc
accggctccggccaggccgtgccgctggaggactacgactacggtccgtacaaccagtag
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