Streptomyces cadmiisoli: DN051_26140
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Entry
DN051_26140 CDS
T07301
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
scad
Streptomyces cadmiisoli
Pathway
scad02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
scad00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
DN051_26140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scad03021
]
DN051_26140
Transcription machinery [BR:
scad03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DN051_26140
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_28
KORA
LexA_DNA_bind
Motif
Other DBs
NCBI-ProteinID:
AWW39716
UniProt:
A0A2Z4J484
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All DBs
Position
5989331..5990629
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AA seq
432 aa
AA seq
DB search
MPESSERGRSVPHGSFTPAVPLIAFGTESGEAADSAPRAALPYHSAAIILEVAPVQTQTL
SQTDIATDGAEPGAEPGMLAAVPPQSRAAHHPEAGTDGEAQVPAEPPTDAGEVVPEPVEP
PLPGRVDNSGPSSDLFRQYLREIGRIPLLTAAEEVELARRVEAGLFAEEKLGSTPDLDSQ
LALDLDRLVVMGRMAKRRLIEANLRLVVSVAKRYVGRGLTMLDLVQEGNLGLIRAVEKFD
YARGYKFSTYATWWIRQAMSRALADQARTIRVPVHVVELINRVVRVQRRMLQERGYEPTP
EEVADHLDLLPERVSEVLRLAQEPVSLHAPVGEEDDVALGDLIEDGDAASPVESAAFLLL
REHLEAVLSTLGERERKVVQLRYGLADGRPRTLEEIGRIFGVTRERIRQIESKTLNKLRD
HAFADQLRGYLD
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgagtcctcggagcgcggccgatccgtcccccacgggtccttcacccccgctgtt
ccgctcatcgcgttcgggacggaaagcggcgaggccgccgactccgccccccgagcagcg
ctgccgtaccactcagcagcgatcatcctggaggtcgcccccgtgcagacccagaccctc
agccagaccgacatcgccaccgacggcgcggaaccgggcgcggagcccggcatgctcgcg
gccgtgccgccgcagagccgtgccgcgcaccacccggaggcggggacggacggtgaggcg
caggttccggccgagccgcccaccgacgccggcgaggtcgtccccgagcccgtcgaacca
cccctgccgggccgggtcgacaacagcgggccctcctcggacctgttccgccagtacctg
cgcgagatcggccgtatcccgctgctcaccgcggccgaggaggtcgaactcgcccgccgg
gtcgaggccggcctgttcgccgaggagaagctgggcagcacccccgacctggactcgcag
ctggccctggacctggaccggctcgtcgtgatgggccggatggccaagcggcggctgatc
gaggcgaacctgcggctcgtcgtgtccgtggccaagcggtacgtcggccgcgggctgacc
atgctcgacctggtgcaggaagggaacctcgggctgatccgggcggtcgagaagttcgac
tacgcccgcggctacaagttctccacctacgccacctggtggatccgccaggcgatgtcc
cgcgcgctcgccgaccaggcccgcacgatccgcgtcccggtgcacgtcgtcgagctgatc
aaccgggtcgtccgggtccagcgccgcatgctccaggagcgcggctacgagccgaccccc
gaggaggtcgccgaccacctcgacctgctgccggagcgggtcagcgaggtgctgcgcctc
gcgcaggaaccggtctcgctgcacgccccggtgggcgaggaggacgacgtcgccctcggt
gacctcatcgaggacggcgacgccgccagccccgtcgagtccgccgcgttcctgctgctc
agggagcatctggaggcggtcctgtcgacgctcggggagcgggagcgcaaggtcgtgcag
ctccgctacggcctcgccgacggacggccccgcacgctggaggagatcggccgcatcttc
ggcgtgacccgggagcgcatacggcagatcgagtccaagaccctgaacaagctcagggac
cacgccttcgccgaccaactgcgcggctatctggactga
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