Streptomyces caniscabiei: IHE65_00840
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Entry
IHE65_00840 CDS
T08931
Name
(GenBank) helix-turn-helix domain-containing protein
Organism
scae
Streptomyces caniscabiei
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Paralog
Gene cluster
GFIT
Motif
Pfam:
nSTAND1
WD40
HTH_3
ANAPC4_WD40
AAA_16
DUF1513
AAA_21
AAA_29
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
WEO21801
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All DBs
Position
complement(165001..168729)
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AA seq
1242 aa
AA seq
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MGRPELPVDPAAGPVQRLAHDLRELRCSAGGMSYRTMAKKAGFSVTTLSKAASGERLPSL
AVLQAYVQACGADPVPWEARWAEAEALAGEERQEDADAAPPYRGLVRFEPDDRELFFGRD
RLIDELSELGCASPFAVVFGASGSGKSSLLRAGLIPLLRERIAQQGRRAVLRIFTPGARP
AATYGHLLAPKADDPESWVVVDQFEEVFTLCRERAERDRFLDLLLDARDPGSRLRVLIAV
RSDFYARCAEHPRLAEALHQSGLLVGPMTADELREAVIGPAQAAGLIVERTLTARLVEDV
LDEPGGLPMLSHALLETWRRRKGRMLTLAAYEAAGGVRGAIAASAEEAYGELSPAQAHAA
RHLLLRMVEPGQGNADTRRPLSREEMAGWEDPEVRTVAVRLTQARLLTTDDDGVQLAHEA
LITCWPRLHEWIDADRERLRHHRQLTDAARTWLEHDRDPGTLYRGTRLARAEELFAGDDR
GYDGLTSEETAFLIAAAEQRAEEERAATRARRRSRTLAASLCAVLAVALVVGLTAVRLRQ
DSEQKTTDTAARRVAAVADALRTTDPRTAMLLGVAAWHTSELPESRRALLGALAQPDLDN
FTDPAPGDEPARFLDVSGRTLLSTSDNATWRTWDVGTHRRIASGPLPHGDVLAAGPGGRV
LLISATDRTQRLWDTRTRHWIGDLLPLRDTVSFGASGRHYLVRSMFDDRAGLYSATDGHL
IFRTPSAGSGELADAAADDDRLLAVCPRGRAPQVWDTSTRSVRSGAWTSARDVCGDDTRL
GLTGGRLLALTGGRVRVWDTTSGRELTDVAHPGALGAVVSADGSFLATGGGQEIRVWRLP
NGGAPVFRHSLDNEALSGLAWDSSRPLLRYLEGGTVHTLDLTTTLTRAWRKSPLAGVRLS
PDGRTLATAERIGDRYVFQLRNTRDGRLLRTLPAPSPPLFRTGIPTVPGDITEPLLSFSP
DSGLFAYGISVSIGDTAPQRLMVWDVAAGHAKTTVDLATAGATPTDAVALGPGGRTLLTA
RLTEDGFYNEAWDTGRQRRTARLPGPGGGHLAVSPDGGLLVTDNRIVRAGRSHSLDLVQH
DGIGAIAFAPDGSGLAAGDGTGRVALWDGDLRHRAGVLRNVFLPPIDPSTDSAETTTALA
FSPDGSTLAVGGDAGTIQLWDTATRQPLGPSLPTPGESIDTLAFSPDSTMLYAGSEHVPL
QRYVVDPDRAVSLVCSRAGNTELTRAQWRTYLPDRPYRQVCP
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atgggacgccccgaactaccggtggacccggcggccggtcccgtgcagcgactggcccac
gatcttcgggagctgcgctgctcggcggggggcatgtcctaccggaccatggcgaagaag
gccggcttctcggtgacgaccctgtcgaaagcggcgagcggcgagcgcctgccgtcattg
gccgtgctccaggcgtacgtccaggcatgcggcgccgaccccgttccgtgggaggcgcgt
tgggcggaggccgaggcgctggccggggaggagaggcaggaggatgccgacgccgcaccg
ccctaccgtggcctcgtgcgtttcgagccggacgaccgtgagctgttcttcggccgggac
cgactgatcgacgagttgagcgagctggggtgcgcgtccccgttcgccgtggtgttcggg
gcgtccggcagcggcaagtcctcactgctgcgggccggtctgatccccctgctgcgggag
aggatcgcgcagcaggggcgtagggcggtgcttcggatcttcactccgggagcccggccc
gccgccacctacggacatctgctggcgccgaaggccgacgatcccgagagctgggtggtg
gtggatcagttcgaggaggtcttcaccctctgccgcgagcgcgccgagcgtgaccgcttc
ctcgatcttctgctcgacgcgcgcgacccgggtagccggctgcgcgtgctcatcgccgta
cggtccgacttctatgcgcggtgcgccgaacacccgcgactggcggaggcactgcatcag
agcgggctgctggtcgggcccatgaccgccgatgagctgcgcgaggcggtgatcggtccc
gcgcaggcggccgggctcatcgtggagcggaccctgaccgcgcggctcgtcgaggacgtt
ctcgacgagcccggcggactgccgatgctgtcccacgccctgctggagacctggcggcgg
cgcaagggacggatgctgaccctggccgcgtacgaagcggccggcggggtgcgcggcgcg
atcgcggccagcgccgaggaggcgtacggagaactctcaccggcgcaggcgcatgctgcc
cggcacctgctccttcggatggtcgagcccggccagggcaacgccgacacacggcgcccg
ctcagccgggaggagatggcggggtgggaggaccccgaagtgcgaacggtcgccgtgcgg
ttgacccaggcgcggctgctgaccaccgacgacgacggagtgcagctcgcccacgaggcg
ctcatcacctgctggccgcggctgcacgagtggatcgacgcggaccgggagcgactgcgc
caccaccggcagctgaccgacgccgcccgcacctggctggagcacgaccgcgacccgggc
acgctctaccggggcacccgcctggcgcgggccgaggaactgttcgcgggcgacgaccgc
ggctacgacggtctgacctccgaggagacggccttcctcatcgctgcggcggagcagcgg
gcggaggaggagcgggccgccacccgggcccggcgccggagccgcacgctcgcggcctcg
ctctgcgccgtgctggccgtcgccctggtcgtcggcctgaccgccgtacgactgcgtcag
gacagcgagcagaagaccaccgacacggcggcccgccgggtggccgcggtcgctgacgcg
ctgcgtaccaccgacccgcgcaccgcgatgctgctcggcgtcgccgcatggcacacctct
gagctgccggagtcccgccgagccctgctgggcgcgctggcccagcccgacctggacaac
ttcaccgacccggcgcccggggacgaaccggcgcggttcctcgacgtctccgggcgcact
ctgctcagcaccagcgacaacgccacctggcgaacgtgggacgtaggcacccaccgccgt
atcgcctcggggccgctacctcacggggacgtactcgccgcgggtccgggcggccgggtg
ctcctcatctcggccactgacaggacccagcggctgtgggacacccgaacgaggcattgg
atcggggacctcctgccgctcagggacaccgtgagcttcggggcgagtggccgccattac
ctggtgagaagcatgttcgacgaccgggctgggctctactccgccaccgacggccatctg
atcttccggaccccgtcagccggcagtggggagctcgccgacgcagcggccgacgacgac
cggctgctggccgtctgcccgcgcggccgtgccccgcaggtctgggacacctccacgcgc
agcgtccggtccggtgcctggacgagcgctcgcgacgtctgtggtgacgacacccgcctc
ggcctcaccggcggccggctcctcgctctcaccgggggccgggtgcgtgtatgggacacc
acgtcgggacgagagctcaccgacgtcgcccacccgggtgcccttggcgccgtcgtgagc
gcggacggctcgtttctggcgaccggcggcggccaggagatcagagtgtggcgtctgccc
aacggcggcgcccccgttttccgacactccttggacaacgaggcgctctccggtctggcc
tgggactcctcgcggcccctgctgcggtacctcgaagggggcacggtccacaccctcgac
ctcaccacgacgctcacccgagcctggcgcaagagtccgctcgccggggtccggctcagc
cccgacggcaggacgctcgccaccgccgaacgcatcggtgaccgctacgtcttccagctg
cggaacacacgcgacggccgtctgctgcgcaccctgccggccccgtcacctcccctcttc
cgcaccggcatcccgacggtccccggggacatcaccgagcccttgctgtccttcagcccc
gacagcggcctgttcgcgtacggaatctccgtctccatcggggacacggcgcctcagcgt
ctgatggtgtgggacgtggccgccggacacgcgaagaccactgtcgacctggcgacggcg
ggcgccacgcctacggacgcggtcgccctggggccgggcggtcgtacgctcctcaccgca
cgtctgaccgaggacggcttctacaacgaggcatgggacaccggtcggcagcggaggacg
gcgcgcctccccggcccaggcggcggtcatctggccgtcagcccagacggcgggctcctt
gtgaccgacaaccgcatcgtccgagcgggccggtcccactctcttgacctcgtccagcac
gacggcatcggagccatcgccttcgctcctgacgggtccggcctggcggccggcgacggg
acggggcgggtggccctctgggacggcgacctccggcaccgcgcgggcgtactgcgaaac
gtcttcctgccgcccatcgatccgtccaccgactcggccgagaccaccacggctctcgca
ttcagtccggacggcagcacgctcgccgtgggcggcgacgcgggcaccatccaactctgg
gacaccgcaacccggcaacctctcggcccttctctgcccacccccggtgaaagcatcgac
acgctcgctttcagcccggacagcaccatgctgtacgcgggcagcgagcacgtcccgctc
cagcggtacgtcgtggatccagaccgagcggtttcccttgtctgctcccgtgccgggaac
acggagctgacccgggctcagtggcgcacctaccttccggaccggccgtaccggcaggtc
tgcccctga
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