Streptomyces caniscabiei: IHE65_06500
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Entry
IHE65_06500 CDS
T08931
Name
(GenBank) helix-turn-helix domain-containing protein
Organism
scae
Streptomyces caniscabiei
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
nSTAND1
ANAPC4_WD40
NBCH_WD40
Ge1_WD40
PD40
Cytochrom_D1
RMC1_N
HTH_31
eIF2A
HTH_3
Nbas_N
PROPPIN
HTH_19
HTH_25
HTH_26
AAA_22
Nup160
AAA_19
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
WEO22818
LinkDB
All DBs
Position
complement(1448719..1452693)
Genome browser
AA seq
1324 aa
AA seq
DB search
MGDPQHGQHADPHRGRDHDAPTTLSFPAQLRRLRQERGLSLTDLARRTHYSKGYLSKIET
GTKRATVDVARLCDHVLGADGELLRLVQQAPPRDGHPDGHPDGDSAARQSDATCPYRGLS
AFTPQDAEWFFGRERATAALVERIFERVGSGPLMLVAPSGAGKSSLLNAGLVPALKRGDF
PMPGAERWPVVLLTPTSRPLDELLERTAKAVGGDLGVTVEAVRENPAALLAAVRAMADEP
SPAPGDRRPPPLRPVLIVDQFEELFTLCPDHEERRAFVRVLRALATTGPGDDTRAPAVVV
FGVRADFTGSCLGLPELTPVLTDGLFVLAPMSVAELLESITRPAELAGVTLEPGLVPLLL
RDAGLRDAGLRDAPDATLRGTAHPVGTGAAQPGGIGAAQPTGIGADETPSGALPLVSHAL
LATWQRRTDSALTVDGYERAGGIQGAIARTAENVFARLYPAEQRTIRRILSRLVVVADGA
GATRRRTSRTALTEQLGDADGAAAALDAFVRARLITLDSDTVQITHEALLHAWPRLRDWI
HADRAGLLLHQQLAHAAAEWERERRDPSALYRGTRLETVRAWADESDGWSRLGPIEQAFL
RASQAEEDGRRRQAGRQIRLRQSLLATLVVLLGLAVTAGGLAYQQREGALDQERAARSQA
LAVRSASLAGGRPEASMLLAEEAYRADTTVEARGALLSTQAQPFSARLGGYRGPVNAVAF
APDDRTLATASSDGTVTLRATTGDRRTLATFTVPGRVRSVAFSPDGRTVAATSTDGPVTL
WDVRDRRRTAALPAGTKGDRAVAFDPRDGTLAVATADGTVELWSTGRTPRRTASLTGHKG
TLNALAYAPDGTKLVSAGADRTVRLWDTDRAERLDVLEGHTDEVLGAAFSPDGRQVVSGG
IDRTVRLWDVRDGEQTAVFTGGSDDINAVAYTPDGAAVIGAVGDGTTRLWDVRDGRQTAV
LAGHTDYVMGVAVTSDGTRLATAGFDQSVVLWDLGGPVLTARPFTEVWQTVYSPDGKLLA
TADTDHTVRLWDVRTHRLLKKLTGHTETVFSVAFSPDGKTLASGSSDGTIRLWDVDRRTF
LATLTGHTGEVFSVAFAPDGKTLASAGADRTVRLWDIAARRDLAVLTGHEDYANAVAFSP
DGRTLASAGDDLTVRLWDVASHQPLAELTGHTGAVRSVAFSPDGRTLASSGNDGTVLLWD
VRTRRSRTALTGHTGAARGLAFSPDGRMLASSGNDRTVRLWDMATRQPWATLSGHTDAVW
GVDFAPDGRTVASSSTDGTVRLWDLDPGARLEQICRLSAGLGPAERGSLLPGTPLSSRPP
CGRS
NT seq
3975 nt
NT seq
+upstream
nt +downstream
nt
ttgggggacccgcagcacggacagcacgcagaccctcaccgcggacgggaccacgacgct
ccgaccacgctgtctttccccgcgcaactgcgacgactgcgccaggaacgcgggctgtcg
ctcaccgatctcgcccggcggacccattacagcaagggctacctcagcaagatcgagacc
ggtacgaaacgcgccacggtcgacgtcgcccgtctctgcgaccatgtgctgggcgcggac
ggcgagttgttacggctggtgcagcaggccccgccccgtgacgggcaccccgacgggcac
cccgacggggacagcgcggcgcggcagtccgacgccacgtgtccctatcgcggcctgtcg
gcgttcaccccgcaggacgcggagtggttcttcggccgggagcgcgccacggccgccctg
gtggagcggatcttcgaacgggtcggcagcggaccgctgatgctggtcgccccgtccggc
gcgggcaagtcgtccctgctcaacgccggcctcgtacccgctctgaaacgcggcgacttc
cccatgccgggcgccgaacgctggccggtggtcctgctcacccccacctcacgccccctc
gacgaactgctggaacgcaccgccaaggcggtcggcggcgacctcggcgtcaccgtggag
gcggtgcgggagaaccccgccgccctgctcgccgccgtacgcgcgatggcggacgaaccg
tcgccggcgccgggggaccgcagacccccgcccctgcgccccgtcctgatcgtggaccag
ttcgaggaactgttcacgctctgcccggaccacgaggaacgccgtgccttcgtccgcgtg
ctgcgtgccctcgcgaccaccggaccgggggacgacacgcgcgcgccggccgtcgtggtg
ttcggcgtacgagccgacttcaccggcagctgtctgggcctgcccgaactgaccccggtc
ctcaccgacggactcttcgtcctggcgcccatgtccgtggcggagctgctggagtcgatc
acccggcccgcggaactcgccggcgtcaccctcgaacccggcctcgtcccgctcctcctg
cgcgacgccggactgcgtgacgccggcctgcgcgacgcaccggacgcgaccctccggggc
accgcgcaccccgtggggaccggcgccgcgcagcccggcggcatcggcgcagcgcagccc
accggcatcggcgccgacgagacgccgtccggcgcgctcccgctcgtctcccacgcactg
ctcgccacctggcagcgccgtacggactccgcgctcaccgtcgacgggtacgagcgggcc
ggcggcatccagggagccatcgcccgcaccgccgagaacgtgttcgcccggctgtacccg
gccgagcagcggacgatccgccgcatcctgtcccggctcgtggtcgtcgctgacggcgcc
ggagcgacccgccgccggaccagcaggaccgctctgacggaacagctcggcgacgccgac
ggcgcggccgccgcgctcgacgcgttcgtccgcgcccggctcatcaccctggacagcgac
acggtccagatcacccacgaggccctgctgcacgcctggccccggctgcgcgactggatc
cacgccgaccgcgccggcctcctcctgcaccagcaactcgcccacgccgccgccgaatgg
gagcgcgagagacgcgacccatccgccctgtacaggggcacccggctggagaccgtacgg
gcctgggccgacgagtccgacggatggagccgcctcggccccatcgagcaggcctttctg
agggccagccaggcggaggaggacggccgccgcagacaggccggacggcagatccggctg
cgccagtccctgctcgccacgctcgtcgtcctgctcgggctcgccgtgaccgccggcggc
ctcgcctaccagcagcgggagggcgccctcgaccaggagcgcgccgcccgctcccaggcc
ctcgccgtgcggtccgcgtccctcgccgggggccggcccgaggcgtcgatgctgctcgcg
gaggaggcctaccgtgccgacaccaccgtcgaggcgcgcggcgccctcctcagcacccag
gcccagcccttctcggcccggctcggcggctaccggggcccggtcaacgcggtggccttc
gcccccgacgaccgcaccctggcgacggccagctccgacggcaccgtcaccctgcgcgcc
accaccggcgaccgtcggaccctcgccaccttcaccgtccccggccgggtccgttcggtc
gccttcagccccgacggccgcacggtggcggccacgtcgacggacggccccgtgaccctc
tgggacgtccgcgaccgccgtcggacggccgccctcccggccggcaccaagggcgaccgg
gcggtggccttcgacccgcgcgacggcacgctcgccgtcgcgaccgccgacgggaccgtc
gaactctggagcaccgggcgcacaccccggcgcacggcctcgctcaccggtcacaagggc
accctcaacgcgctggcgtacgcccccgacggcacgaaactcgtctccgccggcgccgac
cggaccgtacgcctgtgggacaccgaccgcgcggaacggctcgacgtgctcgaagggcac
accgacgaggtgctgggcgcggcgttctccccggacggacggcaggtggtctccggcggc
atcgaccggaccgtacggctgtgggacgtgcgtgacggggagcagaccgcggtgttcacc
ggcggcagcgacgacatcaacgccgtcgcctacacaccggacggcgcggcggtgatcggc
gcggtcggtgacggcacgacccggctgtgggacgtgcgcgacggccggcagaccgccgtg
ctcgccggccacaccgactacgtcatgggggtcgccgtgacctccgacggcacccggctg
gccacggccggcttcgaccagtccgtcgtcctgtgggacctgggcggaccggtgctgacg
gcgcgtccgttcacggaggtctggcagacggtctacagccccgacgggaagctgctcgcc
accgccgacaccgaccacaccgtgcggctctgggacgtacggacccaccgtctcctcaag
aaactcaccggccacaccgagacggtcttctcggtggcgttctcccccgacggcaagacc
ctcgcctcggggagctccgacggcacgatccgcctgtgggacgtggaccggcgcaccttc
ctggccacgctcaccggccacaccggggaggtcttctccgtggccttcgcgccggacggc
aagaccctcgcctcggccggcgccgaccgcacggtccgcctgtgggacatcgccgcgcgc
cgcgacctcgccgtcctcacgggacacgaggactacgccaacgccgtcgccttcagcccg
gacggccgcactctggcgagcgccggcgacgacctgaccgtacggctctgggacgtcgcc
tcgcaccagcccctggccgaactcaccggccacaccggcgcggtacggagcgtcgccttc
agcccggacggccgcaccctcgccagcagcggcaacgacggaaccgtactcctgtgggac
gtccgcacgcggcgctccaggaccgcgctgacagggcacaccggtgccgcgcggggcctc
gcgttctcaccggacggccgcatgctcgccagcagcggcaacgaccggacggtgcggctg
tgggacatggccacacggcagccgtgggcgaccctgtccggccacaccgacgccgtgtgg
ggcgtggacttcgcacccgacgggcggacggtggccagcagcagcaccgacgggacggta
cggctgtgggacctcgaccccggggcgcgcctggagcagatctgccgcctcagcgccggc
ctcggccccgccgaacgcggcagcctgctgccggggacgccgctgtcctcgcggccgccg
tgcggccgctcctga
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