KEGG   Streptomyces caniscabiei: IHE65_06500
Entry
IHE65_06500       CDS       T08931                                 
Name
(GenBank) helix-turn-helix domain-containing protein
Organism
scae  Streptomyces caniscabiei
SSDB
Motif
Pfam: WD40 nSTAND1 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd WDR55 EIF3I WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st ANAPC4_WD40 Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_WDR19_1st NBCH_WD40 Beta-prop_TEP1_C Beta-prop_SCAP Ge1_WD40 Beta-prop_IFT140_1st Beta-prop_RIG_2nd PD40 Beta-prop_DCAF4 Cytochrom_D1 RMC1_N Beta-prop_HPS5 HTH_31 Beta-prop_DCAF12 Beta-prop_Vps41 eIF2A Beta-prop_WDR35_TULP_N Beta-prop_SPT8 WD_LRWD1 HTH_3 Nbas_N PROPPIN Beta-prop_NWD2_C DUF7165 Beta-prop_Nup120_160 Beta-prop_NUP159_NUP214 HTH_25 HTH_19 HTH_26 AAA_22 AAA_19
Other DBs
NCBI-ProteinID: WEO22818
LinkDB
Position
complement(1448719..1452693)
AA seq 1324 aa
MGDPQHGQHADPHRGRDHDAPTTLSFPAQLRRLRQERGLSLTDLARRTHYSKGYLSKIET
GTKRATVDVARLCDHVLGADGELLRLVQQAPPRDGHPDGHPDGDSAARQSDATCPYRGLS
AFTPQDAEWFFGRERATAALVERIFERVGSGPLMLVAPSGAGKSSLLNAGLVPALKRGDF
PMPGAERWPVVLLTPTSRPLDELLERTAKAVGGDLGVTVEAVRENPAALLAAVRAMADEP
SPAPGDRRPPPLRPVLIVDQFEELFTLCPDHEERRAFVRVLRALATTGPGDDTRAPAVVV
FGVRADFTGSCLGLPELTPVLTDGLFVLAPMSVAELLESITRPAELAGVTLEPGLVPLLL
RDAGLRDAGLRDAPDATLRGTAHPVGTGAAQPGGIGAAQPTGIGADETPSGALPLVSHAL
LATWQRRTDSALTVDGYERAGGIQGAIARTAENVFARLYPAEQRTIRRILSRLVVVADGA
GATRRRTSRTALTEQLGDADGAAAALDAFVRARLITLDSDTVQITHEALLHAWPRLRDWI
HADRAGLLLHQQLAHAAAEWERERRDPSALYRGTRLETVRAWADESDGWSRLGPIEQAFL
RASQAEEDGRRRQAGRQIRLRQSLLATLVVLLGLAVTAGGLAYQQREGALDQERAARSQA
LAVRSASLAGGRPEASMLLAEEAYRADTTVEARGALLSTQAQPFSARLGGYRGPVNAVAF
APDDRTLATASSDGTVTLRATTGDRRTLATFTVPGRVRSVAFSPDGRTVAATSTDGPVTL
WDVRDRRRTAALPAGTKGDRAVAFDPRDGTLAVATADGTVELWSTGRTPRRTASLTGHKG
TLNALAYAPDGTKLVSAGADRTVRLWDTDRAERLDVLEGHTDEVLGAAFSPDGRQVVSGG
IDRTVRLWDVRDGEQTAVFTGGSDDINAVAYTPDGAAVIGAVGDGTTRLWDVRDGRQTAV
LAGHTDYVMGVAVTSDGTRLATAGFDQSVVLWDLGGPVLTARPFTEVWQTVYSPDGKLLA
TADTDHTVRLWDVRTHRLLKKLTGHTETVFSVAFSPDGKTLASGSSDGTIRLWDVDRRTF
LATLTGHTGEVFSVAFAPDGKTLASAGADRTVRLWDIAARRDLAVLTGHEDYANAVAFSP
DGRTLASAGDDLTVRLWDVASHQPLAELTGHTGAVRSVAFSPDGRTLASSGNDGTVLLWD
VRTRRSRTALTGHTGAARGLAFSPDGRMLASSGNDRTVRLWDMATRQPWATLSGHTDAVW
GVDFAPDGRTVASSSTDGTVRLWDLDPGARLEQICRLSAGLGPAERGSLLPGTPLSSRPP
CGRS
NT seq 3975 nt   +upstreamnt  +downstreamnt
ttgggggacccgcagcacggacagcacgcagaccctcaccgcggacgggaccacgacgct
ccgaccacgctgtctttccccgcgcaactgcgacgactgcgccaggaacgcgggctgtcg
ctcaccgatctcgcccggcggacccattacagcaagggctacctcagcaagatcgagacc
ggtacgaaacgcgccacggtcgacgtcgcccgtctctgcgaccatgtgctgggcgcggac
ggcgagttgttacggctggtgcagcaggccccgccccgtgacgggcaccccgacgggcac
cccgacggggacagcgcggcgcggcagtccgacgccacgtgtccctatcgcggcctgtcg
gcgttcaccccgcaggacgcggagtggttcttcggccgggagcgcgccacggccgccctg
gtggagcggatcttcgaacgggtcggcagcggaccgctgatgctggtcgccccgtccggc
gcgggcaagtcgtccctgctcaacgccggcctcgtacccgctctgaaacgcggcgacttc
cccatgccgggcgccgaacgctggccggtggtcctgctcacccccacctcacgccccctc
gacgaactgctggaacgcaccgccaaggcggtcggcggcgacctcggcgtcaccgtggag
gcggtgcgggagaaccccgccgccctgctcgccgccgtacgcgcgatggcggacgaaccg
tcgccggcgccgggggaccgcagacccccgcccctgcgccccgtcctgatcgtggaccag
ttcgaggaactgttcacgctctgcccggaccacgaggaacgccgtgccttcgtccgcgtg
ctgcgtgccctcgcgaccaccggaccgggggacgacacgcgcgcgccggccgtcgtggtg
ttcggcgtacgagccgacttcaccggcagctgtctgggcctgcccgaactgaccccggtc
ctcaccgacggactcttcgtcctggcgcccatgtccgtggcggagctgctggagtcgatc
acccggcccgcggaactcgccggcgtcaccctcgaacccggcctcgtcccgctcctcctg
cgcgacgccggactgcgtgacgccggcctgcgcgacgcaccggacgcgaccctccggggc
accgcgcaccccgtggggaccggcgccgcgcagcccggcggcatcggcgcagcgcagccc
accggcatcggcgccgacgagacgccgtccggcgcgctcccgctcgtctcccacgcactg
ctcgccacctggcagcgccgtacggactccgcgctcaccgtcgacgggtacgagcgggcc
ggcggcatccagggagccatcgcccgcaccgccgagaacgtgttcgcccggctgtacccg
gccgagcagcggacgatccgccgcatcctgtcccggctcgtggtcgtcgctgacggcgcc
ggagcgacccgccgccggaccagcaggaccgctctgacggaacagctcggcgacgccgac
ggcgcggccgccgcgctcgacgcgttcgtccgcgcccggctcatcaccctggacagcgac
acggtccagatcacccacgaggccctgctgcacgcctggccccggctgcgcgactggatc
cacgccgaccgcgccggcctcctcctgcaccagcaactcgcccacgccgccgccgaatgg
gagcgcgagagacgcgacccatccgccctgtacaggggcacccggctggagaccgtacgg
gcctgggccgacgagtccgacggatggagccgcctcggccccatcgagcaggcctttctg
agggccagccaggcggaggaggacggccgccgcagacaggccggacggcagatccggctg
cgccagtccctgctcgccacgctcgtcgtcctgctcgggctcgccgtgaccgccggcggc
ctcgcctaccagcagcgggagggcgccctcgaccaggagcgcgccgcccgctcccaggcc
ctcgccgtgcggtccgcgtccctcgccgggggccggcccgaggcgtcgatgctgctcgcg
gaggaggcctaccgtgccgacaccaccgtcgaggcgcgcggcgccctcctcagcacccag
gcccagcccttctcggcccggctcggcggctaccggggcccggtcaacgcggtggccttc
gcccccgacgaccgcaccctggcgacggccagctccgacggcaccgtcaccctgcgcgcc
accaccggcgaccgtcggaccctcgccaccttcaccgtccccggccgggtccgttcggtc
gccttcagccccgacggccgcacggtggcggccacgtcgacggacggccccgtgaccctc
tgggacgtccgcgaccgccgtcggacggccgccctcccggccggcaccaagggcgaccgg
gcggtggccttcgacccgcgcgacggcacgctcgccgtcgcgaccgccgacgggaccgtc
gaactctggagcaccgggcgcacaccccggcgcacggcctcgctcaccggtcacaagggc
accctcaacgcgctggcgtacgcccccgacggcacgaaactcgtctccgccggcgccgac
cggaccgtacgcctgtgggacaccgaccgcgcggaacggctcgacgtgctcgaagggcac
accgacgaggtgctgggcgcggcgttctccccggacggacggcaggtggtctccggcggc
atcgaccggaccgtacggctgtgggacgtgcgtgacggggagcagaccgcggtgttcacc
ggcggcagcgacgacatcaacgccgtcgcctacacaccggacggcgcggcggtgatcggc
gcggtcggtgacggcacgacccggctgtgggacgtgcgcgacggccggcagaccgccgtg
ctcgccggccacaccgactacgtcatgggggtcgccgtgacctccgacggcacccggctg
gccacggccggcttcgaccagtccgtcgtcctgtgggacctgggcggaccggtgctgacg
gcgcgtccgttcacggaggtctggcagacggtctacagccccgacgggaagctgctcgcc
accgccgacaccgaccacaccgtgcggctctgggacgtacggacccaccgtctcctcaag
aaactcaccggccacaccgagacggtcttctcggtggcgttctcccccgacggcaagacc
ctcgcctcggggagctccgacggcacgatccgcctgtgggacgtggaccggcgcaccttc
ctggccacgctcaccggccacaccggggaggtcttctccgtggccttcgcgccggacggc
aagaccctcgcctcggccggcgccgaccgcacggtccgcctgtgggacatcgccgcgcgc
cgcgacctcgccgtcctcacgggacacgaggactacgccaacgccgtcgccttcagcccg
gacggccgcactctggcgagcgccggcgacgacctgaccgtacggctctgggacgtcgcc
tcgcaccagcccctggccgaactcaccggccacaccggcgcggtacggagcgtcgccttc
agcccggacggccgcaccctcgccagcagcggcaacgacggaaccgtactcctgtgggac
gtccgcacgcggcgctccaggaccgcgctgacagggcacaccggtgccgcgcggggcctc
gcgttctcaccggacggccgcatgctcgccagcagcggcaacgaccggacggtgcggctg
tgggacatggccacacggcagccgtgggcgaccctgtccggccacaccgacgccgtgtgg
ggcgtggacttcgcacccgacgggcggacggtggccagcagcagcaccgacgggacggta
cggctgtgggacctcgaccccggggcgcgcctggagcagatctgccgcctcagcgccggc
ctcggccccgccgaacgcggcagcctgctgccggggacgccgctgtcctcgcggccgccg
tgcggccgctcctga

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