Streptomyces caniscabiei: IHE65_06575
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Entry
IHE65_06575 CDS
T08931
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
scae
Streptomyces caniscabiei
Pathway
scae03420
Nucleotide excision repair
scae03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
scae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
IHE65_06575
03430 Mismatch repair
IHE65_06575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scae03400
]
IHE65_06575
Enzymes [BR:
scae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IHE65_06575
DNA repair and recombination proteins [BR:
scae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IHE65_06575
MMR (mismatch excision repair)
Other MMR factors
IHE65_06575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
DEAD
PhoH
Motif
Other DBs
NCBI-ProteinID:
WEO22833
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All DBs
Position
1479276..1482041
Genome browser
AA seq
921 aa
AA seq
DB search
MQFTDAQRTAINTHDDNLLIVACAGSGKTEVISQRIAGLIGQPGVQPKNIVAFTFTEKAA
GELKERVHARIRELHGEVHGLAEMYIGTMHGYALDLLHSHVPEAFKYNVLNDVQTRLFID
KYSKQSGLTTTNAVVNGTTKPLRRYINSKLYQQVMTILREDDVDMDGLRPDVADGLDKYM
QVLRDRSYFDYTAILHYAAVLLNDDNDEGNESVLSLQRHIKETVKYVVVDEYQDTNPVQE
QLIHGLTRYGANLCVVGDDDQTIYQWRGSAVENILTIQGRYPNVHRVTLNENFRSSSAIV
DLARHIVEQIAPGERLNKAMTAAGHQTFERGDLLAREFPDTEAEAIWLVDRMERLRGVPF
LDQEGSEPRGLDWSDFAVLFRSVKADAGPLVEELRRRGVPYVIKGLTKLFETPEVQAAVT
CFRFVAGLADEQDVVDAWGIADVGLTEDDVHEGLRVLTAAMQWDASKPWDSTTLQGVFLE
FLEALELREEYVPNERGELVYYNLGRFSTAIGDFERIHLTSEPQQRFDAFAKWVEHQAPD
YYEESDGDNGYAQPNAVVIATVHQAKGMQWPAVFLPALRKNTFPASGRGGLGVFHVVEAN
LIPGAARYRGTEADERRLFYVAVTRAQKYLALSFAPSEKRTGKKRSDFFNEATGVHTVLT
REVVPSPDGRLTPTPRRGTPEVVMSFSDLKYLFECPYSFKLRLLYGFDSPLQKELGYGKS
LHDVMAEIHKRAIEGDIAAPEEAEDLVERHLNLPFANKAAADQLRPAAETAVRRYLERHG
ATLHQTRYSEQPVEIHPVPGVTVTGRVDLIKRLDTNETSVVDFKSSERAQAEDLTRDQLH
LYVLGYRELTGQDADVVEVLNLDKAGRDTRELVDPEVMTDLGKRVTEAADSLRTNRLSRL
DNWCTSCARCDFAGICRSREG
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgcagttcacggacgcccagcgcaccgctatcaacacccacgacgacaaccttctcatc
gtcgcctgcgcaggttccggcaagaccgaggtgatctcgcagcggatcgccggcctgatc
gggcaacccggtgtgcagcccaagaacatcgtcgccttcaccttcacggagaaggccgcc
ggcgagctgaaggagcgtgtgcacgcccggatccgtgaactccacggcgaggtacacggc
ctcgccgagatgtacatcggcaccatgcacggatacgccctggacctgctgcacagccat
gtgcccgaggccttcaagtacaacgtcctcaacgatgtacagacccgcctgttcatcgac
aagtacagcaagcagtctggtctgacaacgacgaacgcggtcgtgaacggcaccacgaag
ccgcttcggcgctatatcaactccaagctgtaccagcaggtcatgaccatcctccgggag
gacgacgtggacatggacgggctccgtcccgatgtagcggacgggctcgacaagtacatg
caggttctccgcgaccgctcgtacttcgactacacagccatcctccactacgccgctgtc
ctgctgaacgacgacaacgacgaaggcaatgagtccgtcctgagcctccagcggcacatc
aaggagaccgtcaagtacgtcgtcgtcgacgagtaccaggacacaaatccggtgcaggag
cagctgatccatgggctgacccgctacggggcgaacctctgcgtggtcggcgacgacgac
cagacgatctatcagtggcgcggcagtgccgtcgagaacatcctcacgatccagggccgc
taccctaacgtccaccgcgtcaccctgaacgagaacttccgctccagttccgccatcgtg
gatctcgcacgccacatcgtcgagcagatcgctcccggcgagcgtctcaacaaggcgatg
acagccgcaggccaccagaccttcgagcgcggtgacctgttggcacgggagttcccagac
accgaggccgaggccatatggctcgtcgaccgcatggagcggctgcgtggtgtcccattc
ctggaccaggaaggcagtgagccgcgcgggctcgactggtccgacttcgccgtcctgttc
cgctccgtcaaggccgacgccgggcctctcgtcgaagagctgcgccgtcgcggcgtcccg
tacgtcatcaagggcctgaccaagctcttcgagaccccggaggtgcaggcggccgtcacc
tgtttccggttcgtcgcagggcttgccgatgagcaggatgtcgtcgacgcatggggcatc
gccgacgtcgggctcacggaggacgacgtccacgaagggcttcgcgtgctcaccgcagcc
atgcagtgggatgcctccaagccctgggattccaccacactccagggcgtcttcctcgaa
ttccttgaagccttggagctgcgcgaggagtatgtcccgaacgagcggggcgaactcgtc
tactacaacctcggccgcttctctaccgcgatcggggacttcgaacgcatccacctcacc
agcgaaccccagcagcggttcgacgcgttcgccaagtgggtcgagcaccaggcgcccgat
tactacgaggagtccgacggggacaacggctacgcccagcccaacgccgtcgtcatcgcc
accgtccaccaggccaagggcatgcagtggcccgcagtcttcctgcccgccctgcgcaag
aacaccttccccgcctccggtcggggcgggctgggcgtcttccacgtggtcgaggcaaac
ctcatcccgggcgcagcccgctatcggggcaccgaggccgacgagcgccgcctcttctac
gtcgccgtcacccgcgcccagaagtacctggcgctctccttcgcccccagcgagaagcgc
accggcaagaagcgctcggacttcttcaacgaagccacgggagtccacaccgtcctgacc
cgggaggtcgtcccctcccccgatggccgactgacgccgacccccaggcgcggcaccccc
gaggtcgtcatgtccttttcggacctgaagtacctcttcgagtgcccgtactccttcaag
ctccgcctgctctacggcttcgactcacccctgcagaaggaacttggctacggcaagtcc
ctgcacgacgtcatggccgagatccacaagcgtgccatcgagggcgacatcgccgctccc
gaggaagcagaggacctcgtcgagcgccacctcaacctcccgttcgcgaacaaggcggcg
gccgaccagctccgccccgccgccgagacggctgtccggcgatacctggagcgccatggc
gcgaccctgcaccagacgcggtactccgagcagcctgtcgagatccacccggtccccggc
gtcaccgtgaccggccgtgtcgacctgatcaagcggctggacacgaacgagacgtcggtc
gtcgacttcaagtccagcgaacgcgcccaggccgaggacctgacccgtgaccagttgcat
ctgtacgtactcggttaccgggagctgaccgggcaggacgcggacgtcgtcgaggttctc
aatctcgacaaggcgggacgcgatacccgcgagctggtcgaccccgaggtcatgaccgac
ctcggcaagcgggtcacggaggcggcagattcgctgcgcaccaaccggctgtcccgcctg
gacaactggtgcacgtcctgtgcccgctgcgacttcgcgggcatctgccgtagccgcgaa
ggctga
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