Streptomyces caniscabiei: IHE65_08915
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Entry
IHE65_08915 CDS
T08931
Symbol
rfbH
Name
(GenBank) lipopolysaccharide biosynthesis protein RfbH
KO
K13328
dTDP-4-dehydro-2,6-dideoxy-D-glucose 3-dehydratase [EC:
4.2.1.164
]
Organism
scae
Streptomyces caniscabiei
Pathway
scae00523
Polyketide sugar unit biosynthesis
scae01100
Metabolic pathways
scae01110
Biosynthesis of secondary metabolites
scae01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
scae00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
IHE65_08915 (rfbH)
Enzymes [BR:
scae01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.164 dTDP-4-dehydro-2,6-dideoxy-D-glucose 3-dehydratase
IHE65_08915 (rfbH)
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Motif
Pfam:
DegT_DnrJ_EryC1
Beta_elim_lyase
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
WEO23269
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Position
1982977..1984278
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AA seq
433 aa
AA seq
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MGDLRNRITELVRAYHREQATGDFVPGTTHVPVSGAVLSEDDRLALVETALEMRIAAGPA
SRGFERQFARYLGLRKAHLTNSGSSANLLALGALTSPQLEDRRLMPGDEVVTVAAGFPTT
VNPIFHNGLVPVFVDVELGTYNTTPERIERAIGPRTRAIMIAHALGNPFEAEEVARLADE
RDLFLVEDNCDAVGSRYRGRLTGSFGDLSTVSFYPAHHIAMGEGGCVLTDNLALARIVES
LRDWGRDCWCEPGEDNRCLKRFDQKMGDLPPGYDHKYIFSHVGYNLKSTDLQAALGLSQL
TRIEEFTEARRANWRHLRTALDGLPGLLLPEATPGSDPSWFGFLITVDPDAAYSREALVD
HLESRRISTRRLFGGNLVRHPAYTDRQYRVSGSLENSDLITDQTFWIGVFPGITPEMIAY
VADTVREFVLKHS
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgggcgatctcaggaaccgcatcaccgagttggtccgcgcgtaccaccgggaacaggcg
accggggacttcgttcccgggacgacgcacgtaccggtctccggcgcggtgctgagcgag
gacgaccggctggcgttggtggagacggcgctggagatgcggatcgcggccggcccggcc
tcccggggcttcgagcggcagttcgcccggtacctcggactccggaaggcgcacctgacc
aactccggttcctccgccaacctcctcgccctcggcgcgctcacctcgccgcagctggag
gacaggcgactgatgccgggggacgaggtcgtcacggtcgccgccgggttccccacgacg
gtcaacccgatcttccacaacgggctggtgccggtcttcgtggacgtcgagctcggcacg
tacaacaccacgcccgagcgcatcgagcgggccatcggcccccggaccagggcgatcatg
atcgcgcacgccctcggcaacccgttcgaggccgaagaggtggcccgcctcgcggacgag
cgggacctgttcctcgtcgaggacaactgcgacgcggtgggatcccgctaccggggcagg
ctcaccggctccttcggcgacctgtcgaccgtcagcttctatcccgcgcaccacatcgcg
atgggtgaggggggctgcgtgctcaccgacaacctggccctggcgcgcatcgtggagtca
ctgcgcgactgggggcgcgactgctggtgcgagccgggtgaggacaaccgctgcctcaag
cggttcgaccagaagatgggtgacctgccgccggggtacgaccacaagtacattttctcg
cacgtcggctacaacctgaagtcgaccgacctccaggccgccctcggactgtcccagctg
acacggatcgaggagttcaccgaggcccggcgcgccaactggcgccatctgcgcaccgcg
ttggacgggctgcccggcctgctgctgccggaggccacaccgggaagcgatccgagctgg
ttcgggttcctcatcaccgtggacccggacgccgcgtacagcagggaggccctggtcgac
cacctggagtcgcgccggatcagcacccgccgcctgttcgggggcaacctcgtccgccac
cccgcttacaccgaccgccagtaccgggtgtccgggtccctggagaacagcgacctgatc
accgatcagacgttctggatcggggtcttcccgggcatcaccccggagatgatcgcctat
gtcgccgacaccgtccgggagttcgtgctcaagcactcctga
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