Streptomyces caniscabiei: IHE65_09565
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Entry
IHE65_09565 CDS
T08931
Name
(GenBank) alginate lyase family protein
Organism
scae
Streptomyces caniscabiei
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Gene cluster
GFIT
Motif
Pfam:
Alginate_lyase
He_PIG
fn3
DUF1349
PKD
Motif
Other DBs
NCBI-ProteinID:
WEO23391
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Position
complement(2140998..2144351)
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AA seq
1117 aa
AA seq
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MHPLSRRSFLGAAGLTAAAGTGILTAAASASATPASAAWARSTGATRTFSHPGLLHSAAD
LDRLRSAVAAKEAPIHDGFTVLAAHARSRATYTAQNTGQITSWGRGPTNFMSQAVADSAA
AYQNALMWCVTGERAHADKARDILDAWSASLTMITGADGPLGAGLQAFKFVNAAELLRHT
GYDGWAEADIARCERSFLDVWYPAVSGYMLYANGNWDLTAIQTVLAIGVFCEEPALFEDA
LRFAAAGAGNGSVPGRIVTAGGQGQESGRDQGHEQLAVGLMGDAAQVAWNQGVDLWGFDG
NRLLANAEYAARYNLGGDVPFTPDLDRTGKYIKKTVSAVGRGTLPPIYEMYLAHYAGVRG
LDAPATKAAVFRGTGGARVVEGTNDDLPSFGTFAYAGATAPASTPVPEPPAGVTAVGDPG
SVTVAWLPSAWATGYTVRRSTRPEGPYEEVATGLDEPTYTDREVRRGRTYHYTVAATNSQ
GSSGSSSQVVASAGLPGPWDARDLGTVRIPGAALFDGERFVLRASGTADTYHLAHLPLRG
DGTVTARIVWPLSSQYSKIGVTVRDALDPDAAHASMLIQGLPLHTWSGVWSVRKAAGTAV
SATGSTPVPPTQQQAITTAAAFPISGLGALPESATPLEAPYVEGAGDGYRLRAPYWVRVT
REGRRCTGAISPDGVRWTEVGSSEVDLGRTVHAGLVLTSCLGVDEEYADTGTGAFDNVTV
VSATGGEVWSVPRPARRATDLRAGSGADAVELTWTDPDLSARYRVRRATRADGTYRTIAT
GVAPVGFGARLRYTDATGTPGTTYHYVVTKSNEGGHGPRSKPAAARMPSPTTPRLTSAAT
AFANQGAPFQYLIRASHAPVRFGASGLPAGLRVDGRTGLISGTPTRTGEFTVTTTAGNAA
GEASGTLTLTVGTPPPAPWSYGDLGDVVLDERAVGTLGVVAVRTPGSTAYEEDGTFVVRG
AGVDLSVNNQGMTGQFTRRPVTGDCEITARLVSRTGAAADRVGLLMAKSLSPFDQAAGAI
VSGGTSAQLMLRTTVAGRSAFTGGAPVTAPCLLRLRRVGTAFSAAVSTDGGVTFTPLADG
EIPGFGDAPYHVGLVVCSRDPLAHVTARFSEVSITPL
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
gtgcatcccctcagcagacggtcgttcctcggcgcggccggtctcacggccgcggccggc
accggaatcctgacggccgccgcctccgcctccgccaccccggcctccgccgcgtgggcg
cgctccaccggggcgacccgtaccttcagccaccccggcctcctgcacagcgcggccgat
ctggaccggctgcggagcgcggtcgccgcgaaggaggcgccgatccatgacggcttcacc
gtcctcgcggcccacgcccggtccagggccacgtacaccgcgcagaacacgggccagatc
acttcctgggggcgcggccccaccaacttcatgagccaggccgtcgccgactccgcagcc
gcctaccagaacgcgctgatgtggtgcgtgacgggcgagcgggcccacgcggacaaggcg
cgggacatcctcgacgcctggtccgcctccctcaccatgatcacgggtgccgacggcccg
ctcggcgccggtcttcaggccttcaagttcgtcaacgccgccgagctgctgcggcacacc
gggtacgacggctgggcggaggcggacatcgcccgctgcgagcggtcgttcctcgacgtc
tggtacccggcggtctccggctacatgctctacgccaacggcaactgggacctgacggcc
atccagaccgtcctggccatcggcgtgttctgcgaggagcccgccctcttcgaggacgcc
ctgcggttcgcggcggcgggcgccggcaacggcagcgtccccggccgcatcgtcacggcc
ggcggccagggccaggagtccggccgcgaccaggggcacgagcagctcgcggtcggcctg
atgggcgacgcggcgcaggtggcctggaaccagggcgtggacctgtggggcttcgacggc
aaccggctcctcgcgaacgccgagtacgccgcccgctacaacctcggcggcgacgtcccc
ttcacgcccgacctggaccgcaccggcaagtacatcaagaagaccgtctccgccgtcggc
cgcggcaccctcccgccgatctacgagatgtacctcgcccactacgccggggtgcgcggc
ctcgacgcccccgcgacgaaggcggcggtcttccggggcaccgggggcgcccgcgtcgtc
gagggcaccaacgacgacctcccgagcttcggcaccttcgcctacgccggggccaccgcc
cccgcgtcgacacccgtaccggagcccccggccggggtcacggcggtgggcgaccccggg
tccgtgaccgtggcgtggctgccgtcggcctgggccaccgggtacaccgtccggcggtcc
acccgccccgagggcccgtacgaggaggtcgccaccggcctcgacgagccgacgtacacc
gaccgggaggtgcgccgcgggcggacgtaccactacaccgtcgccgccaccaactcccag
ggaagcagcggcagttcgagccaagtggtcgcctccgcgggcctgccggggccgtgggac
gcccgggacctggggacggtgcgcatcccgggtgcggccctgttcgacggcgagcggttc
gtgctccgggcgagcggcacggcggacacctaccacctggcccatctgccgctgcggggc
gacggcacggtcaccgcccggatcgtgtggccgctcagctcccagtactccaagatcggc
gtcaccgtccgcgacgccctcgacccggacgccgcgcacgcctcgatgctgatccaggga
ctgccgctgcacacctggagcggggtgtggagcgtccggaaggcggccgggaccgccgtc
tcggcgaccggcagcacccccgtgccgcccacccagcagcaggcgatcaccaccgccgcc
gcgttcccgatctccggcctgggcgcgctcccggagtcggcgacacccctggaggccccg
tacgtcgagggcgcgggcgacggttaccggctgcgggcgccgtactgggtgcgggtgacc
cgtgagggccgccgctgcaccggggcgatctcgccggacggcgtccggtggaccgaggtc
ggcagctccgaggtcgacctggggcggaccgtgcacgccggactggtcctcacgtcctgt
ctgggcgtcgacgaggagtacgccgacaccggcaccggcgccttcgacaacgtcacggtg
gtgtccgccaccgggggagaggtctggtcggtgccccgccccgcccgacgggccaccgac
ctcagggccggctccggggccgacgcggtggagctgacctggaccgatcccgacctctcc
gcccgctaccgggtgcggcgcgccacccgcgccgacggcacctaccggacgatcgcgacc
ggcgtcgccccggtcggcttcggcgctcgcctccggtacacggacgccaccggcaccccc
ggcacgacgtaccactacgtcgtcacgaagagcaacgagggcggacacggcccccgctcg
aagccggccgccgcacgcatgccgtcccccaccacgccgcgactcacctccgccgccacg
gcgttcgccaaccagggtgcccccttccagtacctgatccgtgcctcacacgctcccgtg
cgcttcggcgcgagcgggctccccgcgggcctgcgcgtcgacggacgcacgggtctgatc
tccggaacccccacccggaccggcgagttcaccgtcaccaccaccgcgggcaacgcggcg
ggcgaggcgtccggcaccctcaccctgaccgtcggcacaccgcccccggccccctggtcg
tacggcgatctcggcgacgtcgtcctcgacgagcgcgccgtcgggacgctgggcgtggtc
gcggtccgtacccccggcagtacggcgtacgaggaggacgggaccttcgtcgtacggggc
gcgggtgtcgacctgtccgtcaacaaccagggcatgacggggcagttcacgcggcggccg
gtcaccggcgactgcgagatcaccgcccggctggtctcccgcaccggcgccgccgccgac
cgggtcgggctgttgatggccaagtcgctgtcgccgttcgaccaggcggccggggcgatc
gtcagcggcgggacgagtgcccagctgatgctccggacgaccgtggccggacggtcggcg
ttcacgggcggtgccccggtcaccgccccctgcctgctgcggctgagacgcgtcgggacc
gcgttctccgcggcggtgtccacagacggaggtgtcaccttcacccccctcgccgacgga
gagatccccggcttcggtgacgccccctaccacgtgggcctggtggtctgctcccgcgac
ccgctggcccacgtcaccgcgcgattcagcgaggtgagcatcacccccctctag
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