Streptomyces caniscabiei: IHE65_10325
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Entry
IHE65_10325 CDS
T08931
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
scae
Streptomyces caniscabiei
Brite
KEGG Orthology (KO) [BR:
scae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scae03016
]
IHE65_10325
Enzymes [BR:
scae01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
IHE65_10325
Transfer RNA biogenesis [BR:
scae03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
IHE65_10325
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
WEO23528
LinkDB
All DBs
Position
2323805..2325106
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AA seq
433 aa
AA seq
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MTDAQETAADRTLRTTGGAPPDDDGSSEAGAPIPLLEPRDGIPAVIADESSLADVIAAFA
AGSGPVAVDAERASGYRYGQRAYLVQLRREGAGTALIDPVACPDLSGLGEALSGVEWVLH
AATQDLPCLREIDMVPTRIFDTELAGRLAGFPRVGLGAMVEGVLGYVLEKGHSAVDWSTR
PLPEPWLRYAALDVELLVDLRDALEKELDRQGKLEWARQEFDAIASAPPAEPRKDPWRRT
SGMHKVRRRRQMAVVREMWEARDRIAQRRDVSPGKVLSDAAIVEAALALPVNAHALAALT
GFGHRMGRRQLEQWQAAVDRARALPDTALPAHGQPVTGPPPPKAWADKDPAAAARLSAAR
AGVSALAEQLAMPQENLITPDTVRRLCWEPPVTADAESISAALAGYGARAWQVELVTPVL
VGAMGAVAKAKGA
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacgcccaagagaccgcagcagacaggaccctgcgaaccaccggaggcgcccct
ccggacgacgacggatcctctgaagcgggggcgccgatccctctgctggagccgagggac
ggcattccggccgtgatcgccgacgagtcctcgctcgccgacgtgatcgccgcgttcgcc
gccggctccggccccgtcgccgtggacgccgaacgcgcgtccggttatcgctacggtcag
cgggcctatctggtgcagctgcgccgcgagggcgcgggcaccgcgctcatcgatcccgtc
gcctgccccgacctctccggcctcggcgaggcgctctccggcgtggagtgggtgctgcac
gcggccacccaggatctgccctgtctgcgcgagatagacatggtgccgacgcggatcttc
gacaccgagctggccggacggctcgccgggttcccccgggtcggcctcggcgcgatggtc
gagggcgtcctcggctacgtcctggagaagggccactccgcggtcgactggtccacccgc
ccgctgcccgagccgtggctgcgctacgccgcgctcgacgtggagctgctggtggacctg
cgggacgccctggagaaggagctggaccggcaggggaagctggagtgggcgcggcaggag
ttcgacgcgatcgcgtccgcgccgcccgccgaaccgcgcaaggacccctggcggcgcacg
tccgggatgcacaaggtgcggcggcgccggcagatggcggtcgtgcgcgagatgtgggag
gcacgggaccgcatcgcccagcgtcgggacgtctcgccggggaaggtgctgagcgacgcg
gcgatcgtggaggcggcgctggccctgccggtcaacgcgcacgcgctggccgcgctgacc
gggttcgggcatcggatggggcggcggcagctggagcagtggcaggccgcggtggaccgg
gccagagccctgccggacaccgcgctgccggcgcacgggcagccggtgaccggtccgccg
ccgccgaaggcgtgggccgacaaggatccggcggcggcggcgcggctgtccgcggcgcgg
gcgggggtgagtgctctcgccgagcagctcgcgatgcctcaggagaacctgatcacgccg
gacacggtgcggcggctgtgctgggaaccgccggtcacggccgacgccgagtcgatctcc
gcggcgctggccgggtacggggctcgggcctggcaggtggagctggtgacgccggtgttg
gtgggggcgatgggggcggtggcgaaggccaagggcgcctag
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