Streptomyces caniscabiei: IHE65_12175
Help
Entry
IHE65_12175 CDS
T08931
Symbol
whiG
Name
(GenBank) RNA polymerase sigma factor WhiG
KO
K02405
RNA polymerase sigma factor FliA
Organism
scae
Streptomyces caniscabiei
Pathway
scae02020
Two-component system
scae02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
scae00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
IHE65_12175 (whiG)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
IHE65_12175 (whiG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scae03021
]
IHE65_12175 (whiG)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
scae02035
]
IHE65_12175 (whiG)
Transcription machinery [BR:
scae03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
IHE65_12175 (whiG)
Bacterial motility proteins [BR:
scae02035
]
Flagellar system
Flagellar assembly proteins
Stator
IHE65_12175 (whiG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
Sigma70_ECF
HTH_31
UPF0122
HTH_23
Motif
Other DBs
NCBI-ProteinID:
WEO23873
LinkDB
All DBs
Position
complement(2796646..2797482)
Genome browser
AA seq
278 aa
AA seq
DB search
MPQHTSGSDRAAVPTAARGTVRPPAPSTLDELWRTYKTTGDDRLREQLILHYSPLVKYVA
GRVSVGLPTNVEQADFVSSGVFGLIDAIEKFDIDREIKFETYAITRIRGAMIDELRALDW
IPRSVRQKARNVERAYATLESRLRRTPSEGEVAAEMGIAVDELHSVFSQLSLANVVALEE
LLHVGGEGGDRLSLMDTLEDTAADNPVEVAEDRELRRFLARAINTLPEREKTVVTLYYYE
GLTLAEIGNVLGVTESRVSQIHTKSVLQLRAKLASFGR
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgccccagcacacctccgggtctgaccgggcggcggtacccaccgccgctcgcggcacc
gtgcgcccacccgccccctcgacactcgacgagctgtggcggacgtacaagacgacgggc
gacgaccggctgcgcgagcagttgatcctgcactattcaccgctggtgaagtacgtcgcg
ggacgggtgagcgtcggcctgccgaccaacgtcgaacaggcggacttcgtctcctccggg
gtcttcgggctcatcgacgcgatcgagaagttcgacatcgaccgggagatcaagttcgag
acgtacgcgatcacccggatccggggcgccatgatcgacgaactgcgcgcactggactgg
atcccccggtcggtgcggcagaaggcccgcaatgtcgagcgggcctacgccacgctggag
tctcggctcagacgcacgccgagcgagggcgaggtcgccgccgagatgggtatcgcggtc
gacgaactccactcggtcttcagccagttgtcgctggccaacgtggtggcgctggaggag
ctgctgcatgtcgggggcgagggcggcgaccggctgagcctgatggacacgctggaggac
accgccgccgacaatccggtcgaggtcgccgaggaccgggagctgcgacggttcctggcg
cgggccatcaacacgctgcccgagcgggagaagaccgtcgtgacgctctactactacgag
gggctcaccctcgcggagatcgggaacgtgctgggggtgaccgagagccgggtgagccag
atccacacgaagtcggtgctgcagctgcgggcgaagctggcgagtttcggccgttga
DBGET
integrated database retrieval system
