Streptomyces caniscabiei: IHE65_17160
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Entry
IHE65_17160 CDS
T08931
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
scae
Streptomyces caniscabiei
Pathway
scae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IHE65_17160 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scae03019
]
IHE65_17160 (groL)
03110 Chaperones and folding catalysts [BR:
scae03110
]
IHE65_17160 (groL)
03029 Mitochondrial biogenesis [BR:
scae03029
]
IHE65_17160 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
scae04147
]
IHE65_17160 (groL)
Enzymes [BR:
scae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
IHE65_17160 (groL)
Messenger RNA biogenesis [BR:
scae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
IHE65_17160 (groL)
Chaperones and folding catalysts [BR:
scae03110
]
Heat shock proteins
HSP60 / Chaperonin
IHE65_17160 (groL)
Mitochondrial biogenesis [BR:
scae03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
IHE65_17160 (groL)
Exosome [BR:
scae04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
IHE65_17160 (groL)
Exosomal proteins of other body fluids (saliva and urine)
IHE65_17160 (groL)
Exosomal proteins of breast cancer cells
IHE65_17160 (groL)
Exosomal proteins of colorectal cancer cells
IHE65_17160 (groL)
Exosomal proteins of bladder cancer cells
IHE65_17160 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
WEO24769
LinkDB
All DBs
Position
complement(3934972..3936597)
Genome browser
AA seq
541 aa
AA seq
DB search
MAKILKFDEDARRALERGVNKLADTVKVTIGPKGRNVVIDKKFGAPTITNDGVTIAREVE
VEDPYENLGVQLVKEVATKTNDVAGDGTTTATVLAQALVREGLRNVAAGASPAALKKGID
AAVKAVSEELLATARPIDEKSDIAAVAGLSAQDAQVGELIAEAMDKVGKDGVITVEESNT
FGLELDFTEGMAFDKGYLSPYFVTDQERMEAVLDDPYILIHQGKIGAIADLLPLLEKVIQ
ANASKPLLIIAEDVEGEALSTLVVNKIRGTFNAVAVKAPGFGDRRKAMLQDMATLTGAEV
ISEEVGLKLDQVGLDVLGSARRVTVTKDDTTIVDGAGDSGAVQGRVAQIKAEIENTDSDW
DREKLQERLAKLAGGVCVIKVGAATEVELKEKKHRLEDAISATRAAVEEGIVSGGGSALV
HAVKVLEGNLGKTGDEATGVAVVRKAAVEPLRWIAENAGLEGYVITSKVAELDKGQGFNA
ATGEYGDLVKQGVIDPVKVTRSALENAASIASLLLTTETLVVEKKEEEPADAGHGGHGHA
H
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatcctgaagttcgacgaggacgcccgtcgcgccctcgagcgcggcgtcaac
aagcttgccgacacggtcaaggtgacgatcggccccaagggccgcaacgtcgtcatcgac
aagaagttcggcgcccccaccatcaccaacgacggtgtgaccatcgcccgtgaggtcgag
gtcgaggacccgtacgagaacctcggcgtccagctggtgaaggaggtggcgaccaagacc
aacgacgtagcgggtgacggtacgaccaccgccaccgtgctggcccaggcgctcgtccgc
gagggcctgcgcaacgtcgccgccggtgcctccccggccgccctgaagaagggcatcgac
gccgcggtcaaggccgtgtccgaggaactcctcgcgaccgcccgcccgatcgacgagaag
tccgacatcgccgccgtcgccggtctgtccgcccaggacgcccaggtcggcgagctcatc
gccgaggcgatggacaaggtcggcaaggacggtgtcatcaccgtcgaggagtccaacacc
ttcggccttgagctggacttcaccgagggcatggccttcgacaagggctacctgtcgccg
tacttcgtcacggaccaggagcgtatggaggccgtcctcgacgacccgtacatcctcatc
caccagggcaagatcggcgccatcgccgacctgctgccgctgctggagaaggtcatccag
gccaacgcctcgaagccgctgctgatcatcgccgaggacgtcgagggcgaggccctgtcg
accctggtcgtcaacaagatccgcggcaccttcaacgcggtcgccgtcaaggcccccggc
ttcggcgaccgccgcaaggcgatgctgcaggacatggcgacgctgaccggcgccgaggtc
atctccgaggaggtcggcctcaagctcgaccaggtcggtctcgacgtgctcggctccgcc
cgccgcgtcaccgtcaccaaggacgacaccacgatcgtcgacggcgccggtgactccggt
gccgtgcagggccgcgtcgcccagatcaaggccgagatcgagaacacggactccgactgg
gaccgcgagaagctccaggagcgcctcgcgaagctggccggcggcgtgtgcgtcatcaag
gtcggcgccgccaccgaggtggagctgaaggagaagaagcaccgtctggaggacgccatc
tccgcgacccgcgccgcggtcgaggagggcatcgtctccggtggtggctccgcgctcgtc
cacgccgtgaaggtcctcgagggcaacctcggcaagaccggcgacgaggccacgggtgtc
gcggtcgtccgcaaggccgccgtcgagccgctgcgctggatcgccgagaacgccggcctg
gagggctacgtcatcacctccaaggtcgccgagctcgacaagggccagggcttcaacgcc
gccaccggtgagtacggcgacctggtcaagcagggcgtcatcgacccggtcaaggtcacc
cgctccgccctggagaacgccgcgtccatcgcctccctcctgctcacgaccgagaccctg
gtcgtcgagaagaaggaagaggagccggccgacgcgggccacggcggtcacggccacgcc
cactga
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