Streptomyces caniscabiei: IHE65_18205
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Entry
IHE65_18205 CDS
T08931
Name
(GenBank) RNA-guided endonuclease TnpB family protein
KO
K07496
putative transposase
Organism
scae
Streptomyces caniscabiei
Brite
KEGG Orthology (KO) [BR:
scae00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
IHE65_18205
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
OrfB_IS605
Cas12f1-like_TNB
HTH_OrfB_IS605
zf-piccolo
Arginosuc_synth
Zn_ribbon_IS1595
DUF4398
RUBY_RBDX
Motif
Other DBs
NCBI-ProteinID:
WEO24958
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Position
complement(4143095..4144318)
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AA seq
407 aa
AA seq
DB search
MQLRYAFRVYPDAGQRIALAKAFGCARVVFNDCVRDREDARKAGRPLPRAGELSTRLITE
AKRTVERSWLDEVSAVVLQQSLRDAEAAYKNFFASLKGTRKGPKLGAPRFKSRKDARQSI
RFTANARWNITDKGRLNLPKIGAVKVKWSRTLPATPTSVTVIKDAAGRFFASFVIDTDPA
EDAARMPESDQSIGIDLGLTHFAVLSDGTKIDSPRFLRRAEKKLKKAQRDLSRRQKGSKN
REKARLKVARAHAKVTDARKEFHHQLSTRLISENQGIAVEDLSVTGLARTRLAKSVHDAG
WTAFVTMLEYKAERYGRTLIKIGRYEPTSQVCSTCGIKDGPKPLHIREWTCTACGTVHDR
DHNAALNVKQAAGLAVSACGAPVRPESVLAQREETGSHGFPTGNRAA
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgcagctccggtacgccttccgcgtgtacccggatgccggtcagcggatcgcgctggcg
aaggcgttcgggtgcgcccgcgtcgtgttcaacgactgcgtgcgtgaccgtgaggacgcc
cgcaaggcgggcaggcccttgcccagggccggtgagctgtccactcgtctgatcaccgag
gccaaacggaccgtggagcggtcctggctggatgaggtgtccgcggtggtcctgcagcag
tcgctgcgcgacgccgaggccgcctacaagaacttcttcgcctccctcaagggcacccgc
aagggcccgaaactgggtgcgccccggttcaagtcccgcaaggacgcccggcagtcgatc
cggttcaccgcaaacgcccggtggaacatcaccgacaaagggcgcctgaacctgccgaag
atcggggcggtgaaggtgaagtggtcccgcaccctgcccgccacccccacctccgtcacc
gtcatcaaggacgcggccggcaggttctttgcctccttcgtcatcgacaccgaccccgcc
gaagacgccgcccggatgcccgagtcggaccagagcatcggcatcgacctcggcctcacc
cacttcgccgtcctctccgacggcacgaagatcgactcaccccggttcctgcgccgggcg
gagaagaagctgaagaaggcccagagggacctgtcccgcagacagaagggatcgaagaac
cgggagaaggcacgcctgaaggtcgcccgcgcccatgccaaggtcaccgacgcccgcaaa
gagttccaccaccagctctccacccggctgatctccgagaaccaaggaattgccgtggag
gacctgtcggtgacgggactggcgcgtaccaggctggccaagtccgtccacgacgcgggc
tggacggcgttcgtgaccatgctggaatacaaagcggaacggtacggacgcaccctcatc
aagatcggccggtacgagccgacgagtcaggtctgctccacctgcgggatcaaggacggt
cccaaacccctgcacatccgggaatggacctgtactgcctgcggcacggtccacgaccgg
gatcacaacgccgcactcaacgtgaaacaggccgccggactggcggtatcagcctgcgga
gcgccggtaagaccagaatccgttctggcgcagcgcgaagaaacaggaagccacggattc
cccaccggaaaccgtgccgcgtag
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