Streptomyces caniscabiei: IHE65_19440
Help
Entry
IHE65_19440 CDS
T08931
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
scae
Streptomyces caniscabiei
Brite
KEGG Orthology (KO) [BR:
scae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scae03032
]
IHE65_19440 (topA)
03400 DNA repair and recombination proteins [BR:
scae03400
]
IHE65_19440 (topA)
Enzymes [BR:
scae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
IHE65_19440 (topA)
DNA replication proteins [BR:
scae03032
]
Prokaryotic type
DNA Topoisomerases
IHE65_19440 (topA)
DNA repair and recombination proteins [BR:
scae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
IHE65_19440 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
HC2
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
WEO25177
LinkDB
All DBs
Position
complement(4403720..4406569)
Genome browser
AA seq
949 aa
AA seq
DB search
MSPTSETAKGGRRLVIVESPAKAKTIKGYLGPGYIVEASVGHIRDLPNGAAEVPEQYTGE
VRRLGVDVEHDFAPIYVVNADKKAQVRKLKDLLKESDELFLATDEDREGEAIAWHLQEVL
KPKVPVKRMVFHEITKAAIQAAVANPRELNQRLVDAQETRRILDRLYGYEVSPVLWKKVM
PRLSAGRVQSVATRLVVERERERIAFRSAEYWDLTGTFATGRAGDASDPSSLVARLQSVD
GRRVAQGRDFDSLGQIKGAGVLHLDEANARALAAALENTRFSVRSVESKPYRRSPYAPFR
TTTLQQEASRKLGFGAKATMQVAQKLYENGFITYMRTDSTTLSETAVAAARAQVTQLYGA
DYLPAQPRTYAGKVKNAQEAHEAIRPSGDRFRTPAETGLTGDQFKLYELIWKRTVASQMK
DATGNSVTVKIGGTASDGRDAEFSASGKTITFHGFLKAYVEGADDPNAELDDRERRLPQV
SQGDALSAEEITVDGHATKPPARYTEASLVKELEEREIGRPSTYASIIGTILDRGYVFKK
GTALVPSFLSFAVVNLLEKHFGRLVDYDFTAKMEDDLDRIARGEAQAVPWLKRFYFGEGT
DASGTAAAAGNGDGDHLGGLKELVTDLGAIDAREVSSFPVGNDIVLRVGRYGPYIERGEK
DAEGHQRADVPEDMAPDELSIELAEELLAKPSGDFELGADPATGHQIIARDGRYGPYVTE
VLPEGTPKTGKNAVKPRTASLFKSMSLDTVTLDDALKLMSLPRIVGADAEGQEITAQNGR
YGPYLKKGTDSRSLQTEDQLFTITLEEALAIYAQPKQRGRAAAKPPLKELGEDPVSGKPV
VVKDGRFGPYVTDGETNATLRSGDSVETITPERGFELLAEKRAKAPAKKTAKKAPAKKTA
TKTAAKKAAPAKKTAATKKTAASKTAAAKKAAPAKKVAAKKATSGGDGA
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
ttgtccccgaccagcgagaccgcgaagggcggccgccgactcgtcatcgtcgagtcgcct
gccaaggcgaagacgatcaagggctatctcggccccggctacatcgtcgaggcgagcgtg
gggcacatccgcgaccttcccaacggcgccgcggaggtgcccgagcagtacaccggcgag
gtgcgccgcctcggcgtggacgtcgagcatgacttcgcgcccatctacgtggtcaacgcg
gacaagaaggcccaggtcaggaagctcaaggacctgctgaaggagtccgacgaactcttc
ctcgccaccgatgaggaccgcgagggcgaggccatcgcctggcatctccaggaggtgctc
aagcccaaggtcccggtcaagcggatggtcttccacgagatcaccaaggccgcgatccag
gccgccgtcgccaacccgcgcgaactgaaccagcgcctcgtggacgcccaggagacccgc
cgcatcctcgaccgcctctacggctacgaggtctcgccggtcctgtggaagaaggtcatg
ccgcgcctgtcggcgggccgtgtccagtccgtcgcgacccggctcgtcgtggagcgcgag
cgcgagcggatcgccttccgctccgccgagtactgggacctgaccggcaccttcgccacc
ggccgcgccggtgacgcctccgacccgtcgtcgctggtcgcccgtctgcagtcggtggac
ggccgccgcgtcgcccagggccgcgacttcgactcgctcggccagatcaagggcgcaggc
gtccttcacctcgacgaggccaacgcccgcgcgctcgccgccgccctggagaacacccgc
ttctcggtgcgctccgtcgagtccaagccgtaccgccgctcgccgtacgcccccttccgc
acgacgacgctccagcaggaggcctcgcgcaagctcggcttcggggcgaaggcgacgatg
caggtggcgcagaagctgtacgagaacggcttcatcacctatatgcgtacggactccacg
acgctcagcgagaccgccgtggccgccgcccgcgcccaggtcacccagctgtacggcgcc
gactacctgccggcgcagccgcgtacgtacgccgggaaggtcaagaacgcgcaggaggcg
cacgaggcgatccgaccctcgggtgatcgtttccgcacgcccgccgagaccgggctgacc
ggcgaccagttcaagctgtacgagttgatctggaagcggaccgtcgcctcccagatgaag
gacgccacgggcaacagcgtcaccgtcaagatcggtggcaccgcctccgacggccgtgac
gccgagttcagcgcctccggcaagacgatcaccttccacgggttcctcaaggcctacgtc
gagggcgccgacgacccgaacgccgagctcgacgaccgcgagcgcaggctgccgcaggtc
agccagggcgacgcgctctccgccgaggagatcacggtcgacgggcacgccaccaagccc
ccggcccgctacaccgaggcctcgctggtcaaggagctcgaagagcgcgagatcggccgt
ccgtcgacgtacgcgtcgatcatcgggacgatcctcgaccggggctatgtgttcaagaag
ggcacggcgctcgtgccgtccttcctgagcttcgccgtggtcaacctcctggagaagcac
ttcgggcggctcgtcgactacgacttcaccgccaagatggaggacgacctcgaccgcatc
gcgcgtggcgaggcccaggcggtgccgtggctgaagcggttctacttcggcgagggcacg
gacgcgagcggcacggcggccgcggccggcaacggcgacggggaccacctcggcgggctc
aaggagctggtgaccgacctgggcgcgatcgacgcgcgcgaggtctcgtccttccccgtc
ggcaacgacatcgtgctgcgcgtcgggcgctacggcccgtacatcgagcggggcgagaag
gacgcggaagggcaccagcgggcggacgtgcccgaggacatggcccccgacgagctgagc
atcgagctggcggaggaactgctcgccaagccgagcggcgacttcgagctgggtgccgac
cccgcgacgggtcatcagatcatcgcccgcgacggacgctacggcccgtacgtcaccgag
gtgctccccgagggcaccccgaagaccggcaagaacgcggtcaagccgcgcacggcctcg
ctgttcaagtccatgtcgctggacacggtgacgctcgacgacgccctgaagctgatgtcg
ctgccgcggatcgtcggcgccgatgccgagggccaggagatcaccgcgcagaacgggcgg
tacgggccgtatctgaagaagggcacggactcgcggtcgctgcagaccgaggatcagctc
ttcacgatcaccctcgaagaagcgctggcgatctacgcccagcccaagcagcgcgggcgg
gccgccgccaagccgccgctgaaggaactgggcgaggaccccgtcagcgggaagccggtc
gtggtgaaggacggccgcttcgggccgtacgtcaccgacggcgagaccaacgcgacgctg
cggtccggggacagcgtggagacgatcacgcccgagcgcggcttcgaactgctggcggag
aagcgggcgaaggctcccgccaagaagacggccaagaaggcgccggcgaagaagacggcg
accaagaccgccgcgaagaaggccgcgccggcgaagaagaccgccgccacgaagaagacg
gctgcttcgaagacggccgcggcgaagaaggcggcccccgcgaagaaggtggccgcgaag
aaggcgacttctggtggggacggcgcctaa
DBGET
integrated database retrieval system
