Streptomyces caniscabiei: IHE65_22940
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Entry
IHE65_22940 CDS
T08931
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
scae
Streptomyces caniscabiei
Pathway
scae00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
scae00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
IHE65_22940 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
scae01007
]
IHE65_22940 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scae03016
]
IHE65_22940 (serS)
Enzymes [BR:
scae01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
IHE65_22940 (serS)
Amino acid related enzymes [BR:
scae01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
IHE65_22940 (serS)
Transfer RNA biogenesis [BR:
scae03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
IHE65_22940 (serS)
Prokaryotic type
IHE65_22940 (serS)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Motif
Other DBs
NCBI-ProteinID:
WEO25811
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All DBs
Position
complement(5203444..5204721)
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AA seq
425 aa
AA seq
DB search
MIDLRLLREDPDRVRASQRARGEDVALVDSLLSADERRRSSGVRFDELRAEQRSLGKLIP
KASADEKAELLKRAEQLKANVKAADAERDAADSETQELLLQLGNLVHPDVPVGGEEDFVT
LETHGEIRDFAAEGFEPKDHLELGTILGAIDTERGAKVSGSRFYFLTGIGALLELALVNA
AIAQATAAGFTPMLTPALVRPQSMAGTGFLGQAAQDVYHLDKDDLYLVGTSEVALAAYHM
DEIIDADRLPLRYAGFSPCFRREAGSHGKDTRGIFRVHQFDKVEMFSYVAPEDSQAEHQR
LLDWEKQWLTSLELPFRVIDVASADLGSSASRKFDCEAWIPTQGKYRELTSTSDCTEYQS
RRLQIRFRDGKQVKPLATLNGTLCAVPRTIVAILENHQQADGSVRVPEVLRPYLGGREVL
EPVAK
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
gtgattgaccttcgcctgctccgtgaggaccccgaccgtgtgcgcgcgtcccagcgcgcc
cgtggagaggacgtcgcgctcgtcgactccctcctgtccgccgacgagcggcgcaggtcg
tccggcgtccgcttcgacgagctccgcgccgagcagaggtcgctcggcaagctgatcccc
aaggcctccgccgacgagaaggccgagctgctcaagcgcgcggaacagctcaaggccaac
gtcaaggccgccgacgccgagcgcgacgcggccgacagcgagacccaggagctcctcctc
cagctcggcaacctcgtccaccccgacgtccccgtcggcggcgaggaggacttcgtcacg
ctggagacgcacggcgagatccgtgacttcgcggccgagggcttcgagcccaaggaccac
ctggagctcggcacgatcctcggcgccatcgacaccgagcgcggcgccaaggtctccggc
tcccgcttctacttcctgacgggcatcggcgccctcctcgaactcgccctggtcaacgcg
gcgatcgcccaggccaccgcggccggcttcaccccgatgctgaccccggcgctggtccgc
ccgcagtcgatggccggcaccggcttcctcggccaggccgcccaggacgtctaccacctc
gacaaggacgacctgtacctggtcggcacctccgaggtcgcgctggcggcgtaccacatg
gacgagatcatcgacgccgaccggctccccctgcgctacgcgggcttctccccctgcttc
cgccgcgaggccggttcgcacggcaaggacacccggggcatcttccgcgtccaccagttc
gacaaggtcgagatgttctcgtacgtcgcgccggaggactcgcaggccgagcaccagcgt
ctgctggactgggagaagcagtggctgacctcgctcgaactgcccttccgggtcatcgac
gtcgcctccgccgacctcggctcctcggcctcgcgcaagttcgactgcgaggcgtggatc
ccgacccagggcaagtaccgcgagctgacctcgacgtccgactgcacggagtaccagtcg
cgccgcctgcagatccgcttccgtgacggcaagcaggtcaagccgctggccacgctcaac
ggcacgctctgcgccgtcccccgcaccatcgtggcgatcctggagaaccaccagcaggcc
gacggttcggtccgcgtccccgaggtcctgcgcccgtacctgggcggccgcgaggtgctg
gagccggtagccaagtga
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