Streptomyces caniscabiei: IHE65_23125
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Entry
IHE65_23125 CDS
T08931
Name
(GenBank) PAS domain-containing protein
Organism
scae
Streptomyces caniscabiei
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS
PAS_9
PAS_4
PAS_8
Response_reg
PAS_7
HisKA
PAS_10
Motif
Other DBs
NCBI-ProteinID:
WEO25842
LinkDB
All DBs
Position
complement(5246884..5252298)
Genome browser
AA seq
1804 aa
AA seq
DB search
MSSRPSRGAARLAAILDALPDALVLVNANGTVVNANTIALEAFEAPGTALVGRGLLDLLP
EFDSRLIPGSMRRPDAMDPTGRTKPTRMTARRTDGSEFPVEVTSANLENGQQAYDGYGYA
NDELLMLVVRDLSGTVDTEAELARSQRQTEMILRAASEGVVGTDTDGRIVLVNPAAAQIL
GYRASDLGGRELHTLVLHSREDGAPFPYTESPLADTLKSGRKHRVRGQVLWSKNGEKVSV
DLTTAPVRDGDQLVGAVMTFTDRRPYDKLAEEKDAEAETHAEELERLAKEHAEELAGVRE
EHAAELAELSEQHAEELAAGDERYAALGEREKDRYEALAARHEQLLAVLGTSLRGPLDQL
RSELGTLAADDAGQLWPEANQVLHHLTAGYSRITTLIDNVLGYQRIDAGEDELVRTAVML
DAVVAAGVDGAVELVGPGRVQFAVHAPPIEAEVDQTRLATALAHLVADVAGVDATGNAPM
STGGYMDNTVVVAAAQRGEVVRIEVRGPYAGGDPVHQPIVQGIVRAHGGVLQTVEVPGMS
GSAYVLEVPLGGGAGAVPAAQLPVAMGVEADPGAVATGAEIALPEQAPVGGGRRRARRSS
VDAFLESEDAPEDREAEAPVAPTGRRRRRAEDAAGAPGAAVAVVGSGEGAEADGSGGTGR
RRGHAAAAEDAGEAVAAEGAVVTAAEHAAGAAAAATGLGGTVPPQGVPAPGGRRARREPA
AQNALPPALPAGLAPAAEATAEADAPGEAGGAQQPTGRRRRALGGTEERAAAPEPGARAV
FALPPAEADRGPEYAEATGLGPVPLPAAPGAPGTPMPMPLPAGTTGTAGPVQAGGPAQVG
EGYDGEGAQGVAAAAAGVPGVGGPVPGGGQVPVAGQAPGGGQVPVGGQVPVGGPVPPGGV
VPAGGPMPVAGVGQQFTGVGQQLPQSGPGAPGGVAGPGSGQGADAGQPAGAGQAPAAGQV
PGGGQVAAAGPMSGAPAGGADDGRHDAALQDPGDDHTPPQPHPVPTPTGRRRAVRQSAPQ
QGEGAGAMAAGQQAPVQGAGAQGIPPQGGPGQPVPAQGAPMAAGQPVAAQGIPGGPQAGP
AQGVPGGPQPVPAQAVGPTPGQPVPAGIAAAQSAAPQGVPGGGPAQAVAGQALPGQALPG
QAVAGQAVAGQPLAGQPLEAVAAQGAVAAAPNAPNAPGQPVVGQPGAVQGVVPPQGAPGG
RQQVPAQAGALGHSVVVPGAQGVPGLQAVPGAQGVQPVQGVAQPVPAAGVPAPGIPGVQQ
PAPAQVAAPGVAQPQQPQAWPDPRHATSGAGVPVAAPQAALPPQSTPSSGTPLPPEVAVQ
QQPRAAQPLPAEAAAPAPAPAQAQATPTPSAPAPAPAPAPAPVDPNSTQGRSISVRTLGQ
GVPFSRQGGPQVQVQAQAQAQAQAQGQAQPQAGATPAPNQPGGSGRRRKLGTPPQPTGDR
PETAARPHPQSTPTNGTGLRLGVGVGQTPPPAQPQQAAAQMSQPSLAGQVPLPAQPSLAG
QVPLPPQQSLAGQSRLTGRTEGAGRSYAIGAPDENADEGPEPLDGPGGAVEVPDRPHPQP
MDDELPPEPLDNPRRLLVWPAPDASTHQALSERGYRPVIVNSREDVDAQIAAYPAALFVD
PLTGPITRTALQSLRQAAVAAEVPVLVTAGLGQATREAAYGADPAILLKALAPRDSEQHP
PRVLLIEEHAEIALALTATLERRGMQVARAASDADAVTLAAQMRPNLVVMDLLQVHRRQA
GIIDWLRANGQLNRTPLVVYTAAVDPSELPRLASGETVLFLAERSTSPEVQTRIVDLLAR
VGTN
NT seq
5415 nt
NT seq
+upstream
nt +downstream
nt
gtgagcagcaggccatcccgaggcgctgctcgcctcgcagccatactggacgcgctgccc
gatgcgttggtgctggtcaacgccaatgggaccgtcgtcaacgccaacacgatcgccctg
gaggccttcgaggcgcccggcaccgccctggtcggacgcgggctgctggacctccttccc
gagttcgactcccggctcatcccgggctccatgcgacggcccgacgccatggacccgacg
gggcggaccaagccgacccggatgaccgcccgccggaccgacggcagcgagttcccggtc
gaggtcacaagcgcgaatctggagaacggccagcaggcgtacgacggttacggctacgcc
aacgacgagctgctcatgctggtcgtacgggatctttcgggcaccgtcgacaccgaggcc
gaactcgcgcgttcgcaacggcagaccgagatgatcctgcgggccgcctccgagggtgtc
gtcgggaccgacaccgacgggcggatcgtcctcgtcaatccggccgccgctcagatactg
gggtaccgggccagtgacctcggcggacgcgagctgcacacgctcgtgctgcactcccgc
gaggacggcgcccccttcccgtacaccgagtccccgctcgcggacaccctgaagtccggg
cgcaagcaccgggtgcgtgggcaggtgctgtggtcgaagaacggcgagaaggtgtcggtc
gacctgacgaccgcaccggtgcgcgacggggatcagctcgtcggcgccgtgatgacgttc
accgaccggcggccgtacgacaagctcgccgaggagaaggacgccgaggccgagacccac
gccgaggagctggagcggctcgccaaggagcacgccgaggaactcgcgggcgtgcgcgag
gaacacgccgccgagctggccgagctcagcgagcagcacgccgaggaactcgccgccggg
gacgagcggtacgcggcgctcggggagcgcgagaaggaccgctacgaggcgctggccgcg
cggcacgagcagctgctcgccgtgctgggcacctcgctgcgcggcccgctcgaccagctc
cgcagtgagctgggcaccctcgccgccgacgacgccgggcagctgtggcccgaggcgaac
caggtgctccaccatctgaccgccgggtactcgcggatcacgacgctcatcgacaacgtg
ctcggctaccagcggatcgacgcgggcgaggacgaactcgtacggacggccgtgatgctc
gacgcggtcgtcgcggccggtgtcgacggggccgtcgagctggtcgggccggggcgggtg
cagttcgccgtgcacgcgccgcccatcgaggccgaggtggaccagacgcggctcgcgacc
gccctcgcgcatctcgtcgccgacgtcgccggtgtcgacgcgacgggcaacgcgcccatg
tccaccggcggctacatggacaacaccgtcgtcgtggcggccgcgcagcgcggtgaggtc
gtgcgcatcgaggtgcgcgggccgtacgccgggggagacccggtgcaccagccgatcgtc
caggggatcgtgcgggcgcacggcggtgtgctccagacggtcgaggtgcccgggatgagc
ggcagcgcgtatgtgctggaggtgccgctcggcggtggtgccggggccgtgcccgccgcg
cagctgcccgtggcgatgggcgtcgaggccgatcccggggccgtggccacgggtgcggag
atcgccctgcccgagcaggcccctgtcggtggcgggcggcgtcgggcgcgacggtcgtcg
gtggacgcgttcctggagagcgaggacgctccggaggaccgggaggccgaggccccggtc
gccccgaccgggcggcgaaggcgccgggcggaggacgcggccggtgcgccgggtgcggcc
gtcgccgtcgtcggttccggtgagggcgccgaggccgacggttccgggggcaccgggcgg
cgacgtgggcatgccgccgctgccgaggatgccggtgaggccgtggccgccgagggcgct
gtcgtcacggcggccgagcacgcggcgggtgccgctgccgccgccaccgggctgggcggg
accgtgccgccgcagggtgtgcccgcccccggcggacggcgcgcgcgccgggagcccgcc
gcacagaacgcgttgccgccggccctgcctgcagggctggccccggccgccgaggcgacc
gccgaggccgacgcccccggcgaggcgggcggtgcccagcagcccaccggccgccgtcgt
cgcgccctcggaggcaccgaggagcgtgccgccgcgcccgagccgggtgcgcgagccgtc
ttcgccctgcccccggccgaggccgaccggggccccgagtacgcggaggccacgggcctc
ggcccggtcccgctgccggcggcgccgggcgcccccggcacacccatgccgatgcccctg
cccgccgggacgaccggcaccgccgggcccgtgcaggccgggggacccgcgcaggtcggg
gaggggtacgacggtgagggcgcccagggcgtcgcggccgcggcggccggggttcccggg
gtcggcggaccggtgcctggaggagggcaagttcctgtggccgggcaggcccccggcgga
gggcaggtgcccgtgggagggcaggtgcccgtcggcgggcccgtgccgcccgggggagtc
gtgcccgccggagggccgatgcccgtcgccggtgtcgggcagcagttcaccggagtggga
cagcagcttccccagagcggtccgggggcgccgggtggcgtcgccgggccgggctcgggg
cagggggccgacgcggggcagccggccggtgccggtcaggcccccgcagccggacaggta
cccggcggtggccaagtggccgccgcggggccgatgtcgggtgcccccgccggtggcgcc
gacgacggtcgccatgacgccgcgctccaggacccgggcgacgaccacaccccgccgcag
ccgcacccggtgcccacgccgaccggccgacgccgtgcggtacggcagtccgccccccag
cagggcgagggcgcgggcgcgatggcggccgggcagcaggcgccggtccagggcgccggc
gctcagggcatccccccgcagggagggcccggccagccggtcccggcgcagggcgcaccc
atggcggccgggcagcccgttgccgcccaggggatcccgggcggcccgcaggccgggccc
gcgcagggtgtccccggcggaccacagccggtgcccgcccaggccgtcgggccgactccc
ggtcagcccgtcccggcggggatcgcggccgcgcagtccgccgctccgcaaggggtcccg
ggaggcggccctgctcaggcggtcgccgggcaggcccttcccggacaagcccttccgggg
caggcggtcgcaggacaggcagtcgcaggacagccgctcgccgggcaaccccttgaggct
gtcgcggcgcagggcgcggtcgctgccgccccgaacgccccgaacgccccgggtcagccc
gtcgtcggacagcccggtgccgtccagggagtcgtcccgccgcagggcgcacccggtggc
cgacagcaggtgcccgcgcaggccggcgccctcgggcactcggtcgtcgtaccgggagcg
cagggcgtaccggggctccaggccgtcccgggggcgcagggcgtgcagccggtgcagggc
gtcgcgcagcccgtgcccgcggccggggtgcccgcgccagggatccccggcgtccagcag
cccgcccccgcccaggtcgccgctcccggagtggcccagccgcagcagccccaggcgtgg
cccgacccccgccatgcgacctccggcgccggtgtccccgtagccgctcctcaggcggcg
ctgcctccgcagtccaccccgtcctcgggcaccccgctgccgccggaggtcgcggtccag
cagcagccgcgcgccgcacagccgttgccggccgaagccgcagccccggccccggccccg
gcccaagctcaggccacgccgacgccctccgcacccgcacccgcacccgcacccgcaccc
gcacccgtcgaccccaactccacccagggccggtcgatcagcgtgcggacgctcggccag
ggtgtccccttctcccgccagggcggccctcaggtccaagtccaggcccaggcccaggct
caggcccaggctcagggacaggcgcagccccaggccggggccacgcccgccccgaaccag
cccggtggctccggcaggcgccgcaagctggggacgccgccccagccgaccggtgaccgt
cccgagacggccgcgcgcccccacccgcagtccacgccgaccaacggcacgggccttcgc
ctcggtgtcggtgtcggccagaccccaccccccgcccagccccagcaggcggccgcgcag
atgtcgcagccctcgctggccgggcaggtcccgctgcccgcgcagccctcgctcgcgggc
caggtcccgctgccgccgcagcagtcgctcgccgggcagtcccggctcacgggccgtacg
gagggtgccgggcggtcgtacgccataggggcgcccgacgagaacgcggacgaaggtccc
gagccgctcgacgggcccggcggcgcggtggaggtccccgaccggccgcatccgcagccg
atggacgacgagttgccgccggagccgctcgacaacccgcgtcggctgctggtgtggccc
gcgccggacgcgtcgacccaccaggcgctgagcgagcgcggctaccggcccgtcatcgtg
aactcccgcgaggacgtggacgcccagatcgccgcgtacccggccgccctcttcgtcgac
ccgctcaccggccccatcacccgcacggcactgcagtcgctgcgccaggccgccgtggcc
gccgaggtgcccgtcctcgtcacggcgggactcggccaggcgacgcgtgaggcggcgtac
ggggccgacccggcgatcctgctgaaggcgctcgctccgcgcgactccgagcagcacccg
ccgcgtgtcctgctcatcgaggagcacgcggagatcgcgctcgccctgaccgcgacgctg
gaacggcgtggcatgcaggtcgcgcgggcggcgtcggacgcggacgcggtcaccctggcc
gcgcagatgcggcccaacctcgtggtgatggacctgctccaggtgcaccgccgccaggcc
gggatcatcgactggctgcgggcgaacggccagttgaaccgcaccccgctcgtcgtctac
acggccgccgtcgacccgtccgaactcccgcgcctggcctcgggcgagacggtcctcttc
ctcgcggaacgctccacgagccccgaggtccagacccggatcgtggacctgctggcacga
gtcggcaccaactga
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