Streptomyces caniscabiei: IHE65_23210
Help
Entry
IHE65_23210 CDS
T08931
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
scae
Streptomyces caniscabiei
Brite
KEGG Orthology (KO) [BR:
scae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scae03021
]
IHE65_23210
Transcription machinery [BR:
scae03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
IHE65_23210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
Sigma70_ECF
HTH_3
HTH_24
MarR
DUF7343
Motif
Other DBs
NCBI-ProteinID:
WEO25857
LinkDB
All DBs
Position
complement(5270198..5271118)
Genome browser
AA seq
306 aa
AA seq
DB search
MSADQGSSKVLTLDKSETAPDAIQAPQDLQALEDRPGPQAPPASEFPASSASANIDTRTL
SRSLFLRLAALDENSPERAYVRDTLIELNLPLVRYAAARFRSRNEPMEDIVQVGTIGLIK
AIDRFDCERGVEFPTFAMPTVVGEIKRFFRDTSWSVRVPRRLQELRLALTKASDELSQKL
DRSPTVTELAAVLGVSEEDVVDGLAVGNAYTASSLDSPAPEDDGGEGSLADRLGYEDTAL
EGVEYRESLKPLLAKLPPRERRIIMLRFFANMTQSQIGEEVGISQMHVSRLLTRTLAQLR
EGLISD
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcagaccagggcagctcgaaggtgctcacgctcgacaagagcgagaccgcgccc
gacgctatccaggcccctcaggaccttcaggcgcttgaggaccgtcccggtccccaggct
ccgccggcgtctgagttcccggcctcgtcggcctcggcgaacatcgacacccgcaccctg
tcccgctccctgttcctgcggctcgccgcgttggacgagaacagccccgagcgtgcctac
gtccgggacacactgatcgagctcaacctcccactggtgcgttacgcggccgcccgtttc
cggtcgcgcaacgagccgatggaggacatcgtccaggtcggaacgatcggcctgatcaag
gcgatcgaccgcttcgactgcgaacggggcgtcgagttcccgacgttcgcgatgccgacg
gtcgtgggcgagatcaagcggttcttccgtgacacctcatggtcggtccgcgtcccacgc
cgcctccaggagctgcggctggccctcaccaaggccagcgacgagctctcccagaagctc
gaccgctcgccgacggtcaccgaactcgccgcggtcctgggtgtgtcggaggaggacgtg
gtcgacggcctcgccgtcggcaacgcctacacggcgtcctcgctcgactccccggccccc
gaggacgacggcggtgagggctccctcgcggaccgcctcggctacgaggacacggcgctg
gagggcgtggagtaccgggagtcgctgaagccgctgctggcgaagctgccgccgcgtgag
cgccggatcatcatgctccggttcttcgcgaacatgacgcagtcgcagatcggcgaggag
gtcggcatctcccagatgcacgtctcccgcctcctcacccggacgctggcgcagctccgg
gagggcctgatctccgactga
DBGET
integrated database retrieval system
