Streptomyces caniscabiei: IHE65_23405
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Entry
IHE65_23405 CDS
T08931
Name
(GenBank) DNA polymerase III subunit gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
scae
Streptomyces caniscabiei
Pathway
scae03030
DNA replication
scae03430
Mismatch repair
scae03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IHE65_23405
03430 Mismatch repair
IHE65_23405
03440 Homologous recombination
IHE65_23405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scae03032
]
IHE65_23405
03400 DNA repair and recombination proteins [BR:
scae03400
]
IHE65_23405
Enzymes [BR:
scae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IHE65_23405
DNA replication proteins [BR:
scae03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
IHE65_23405
DNA repair and recombination proteins [BR:
scae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
IHE65_23405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
RuvB_N
AAA_22
Rad17
AAA_14
AAA_30
AAA_5
zf-CXXC
AAA_19
nSTAND3
Mg_chelatase
AAA_16
AAA_18
T2SSE
TsaE
AAA_28
Motif
Other DBs
NCBI-ProteinID:
WEO25885
LinkDB
All DBs
Position
5306734..5308731
Genome browser
AA seq
665 aa
AA seq
DB search
MSSLALYRRYRPESFAEVIGQEHVTDPLQQALRNNRVNHAYLFSGPRGCGKTTSARILAR
CLNCEQGPTPTPCGECQSCQDLARNGPGSIDVIEIDAASHGGVDDARELREKAFFGPAGS
RYKIYIIDEAHMVTSAGFNALLKVVEEPPEHLKFIFATTEPEKVIGTIRSRTHHYPFRLV
PPGTLREYLGEVCGKEKIPVEEGVLPLVVRAGAGSVRDSMSVMDQLLAGATDEGVTYAMA
TSLLGYTDGSLLDSVVEAFAAGDGAAAFEVVDHVIEGGNDPRRFVADLLERLRDLVILAA
VPDAIDKGLIDAPAEVLERMRAQAGVFGAAELSRAADLVNEGLTEMRGANSPRLQLELIC
ARVLLPATYGDERSVMARLDRLERGVNFSAGGAAPAMGYVPGPDAHGGAAPPMGMAPQAP
HAPQAPHAPQAPHAPHAAQVPAAAQVPPGGGPAAARAAVRGAGAGSGPGGSGGAAPAAGP
MPGQGQGPGATSSPSPSSSPGSGPGPESYGSGGAAGGPAGPGGGGPTGAPAAPHEGAPAA
QAAAASGAPTGPPPPLPRTPSRAARVPRPLPSPTRRAPPAAPLPAPGPPRPPRAVDADPA
DGRRPHPPAAAPRRPPVRPPPHPRPRPRRTPSPVHPRRPRPRPPPTTPPPADPTPARSGP
TSWRR
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgtctctcgcgctgtaccgccgttatcgcccggagtcgttcgccgaggtcatcggg
caggagcatgtcaccgacccgttgcagcaggcgttgcggaacaaccgggtcaatcacgcg
tacctgttcagcgggccgcgcgggtgtggcaagacgaccagcgcgcgcatcctggcccgg
tgtctgaactgcgagcagggccccacccccacaccgtgcggcgagtgccagtcctgccag
gacctggcccgcaacggaccggggtcgatcgatgtgatcgagatcgacgccgcctcgcac
ggtggcgtggacgacgcccgtgagctgcgggagaaggccttcttcggacccgcgggcagc
cggtacaagatctacatcatcgacgaggcccacatggtcacgtcggccggtttcaacgcc
ctgctgaaggtcgtcgaggagccgccggagcacctcaagttcatcttcgcgaccaccgag
cccgagaaggtcatcgggaccatccgctcgcggacgcaccactatcccttccggctcgtc
ccgcccggcacgctccgcgagtacctcggcgaggtctgcggcaaggagaagatcccggtc
gaggagggtgtcctcccgctggtcgtgcgcgccggggccggctccgtgcgtgactcgatg
tccgtcatggaccagctgctcgcgggcgcgacggacgagggcgtgacgtacgccatggcc
acctcgctcctcggctacacggacggttcactgctcgactcggtcgtcgaggccttcgcc
gccggggacggagccgcggccttcgaggtcgtcgaccatgtcatcgagggcggcaacgac
ccgcggcgattcgtcgccgacctgctggagcggctgcgggacctcgtgatcctcgccgcc
gtgccggacgccatcgacaagggcctcatcgacgcccccgcagaggtcctggagcggatg
cgggcccaggccggcgtcttcggcgccgccgagctcagccgcgccgccgacctcgtcaac
gagggcctcaccgagatgcgcggcgccaactcgccccgcctccagctcgaactgatctgc
gcccgcgtgctcctccccgccacctacggcgacgagcggtccgtcatggcccgcctggac
cgcctggagcgcggggtcaacttctccgcaggcggcgccgccccggccatgggatacgtg
cccgggcccgacgcgcacgggggagcggccccgcccatgggtatggctccgcaggccccc
cacgctccgcaggccccccacgctccgcaggccccccacgctccgcacgcggcgcaggtt
cccgccgccgcgcaggttccgccgggcggcgggcccgcggcggccagggccgcggttcgg
ggggcgggggcaggctccggtcccggcggttccgggggcgcagcgccggccgcgggcccg
atgccgggtcaggggcagggcccgggtgcgacgtcgagtccgagtccgagttcgagtccg
ggttcgggtccgggtccggaatcgtacggctccgggggcgccgccggcggaccggcgggt
ccgggcgggggtggccccaccggggcaccggccgcccctcatgagggtgcgcccgccgcc
caggccgccgccgcgagcggtgcgccgacaggtccgcccccgccgctcccgcgcacgccc
agccgggcggcgcgggttccgcgccctctccccagcccaacgcgccgggcgcccccggcg
gcgccgctcccggctcctggcccaccccggccgccgcgggcggtggacgccgacccggcg
gatggccgacggccgcacccgccggcggcggctccgcgccgacccccggtccggccgccc
ccgcaccctcggccccgcccccggcgtacgcccagcccggtccacccgcggcggcccagg
ccccggccgccgcccaccaccccgcccccggcggacccgacccccgcacgctctggccca
acatcctggagacggtga
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