Streptomyces caniscabiei: IHE65_23915
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Entry
IHE65_23915 CDS
T08931
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
Organism
scae
Streptomyces caniscabiei
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NPCBM
Sigma70_r2
zf-HC2
Sigma70_r4_2
PhyR_sigma2
Sigma70_ECF
Motif
Other DBs
NCBI-ProteinID:
WEO25964
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Position
complement(5411077..5412978)
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AA seq
633 aa
AA seq
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MGVDGRDESKSAEGAGAEACTEAGPQVPRQGGRGVPAQWDRSDSGVLPPRAPSDADLIAW
MRSGDDSAYGELYRRHAQAVRRYARTCCRDAHTADDLTAEVFARMLQAVRGGSGPEHAVR
AYLLTSVRRVAATWTSSAKREQLVDDFAVFAARASRGAEVSDSDTLDLGADVRAMHEAEQ
SMAMQAFRSLPERWQAVLWHTEVEDESPSEVATLFGLDANGTRVLASRAREGLKQAYLQA
HVSATLAGNSAECARYADRLGAYARGSLRTRAERGLRAHLEECAACRLAAGQIKDVASGI
PAVVPVAVIGWFGAAGYAKVAALVAGGAGAGAAGAAGAAAGASGGSGGAGAGGGAAAEGL
GAPAKAGIAVSVAGMVAAAVALALANDEVKPKEPLARPPASQPVEAAPEPDLPTEPESRP
APQVPARVVPASEPLPTPTPSPSRPRAAAPAPPAKPPPAPTPTPTPTPAPPRPSPTPPPT
PAPPPPPLPSAVYRWNELRYGVLGDGTEPEMRLGGGSWVWQRYGMSVAGKRYANGVTVHG
RSSVTIDLNRRCTSYNALIGVDDLTHGLGRVYFSVYGDGVRLWKSGLVRGGDPAVPVQVS
LSGRETVRLVVEPDGPHDLAVLADWAESSFRCE
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgggtgttgacgggcgggacgagtcgaagtcggcggagggggcgggggcggaggcctgc
acggaggccgggcctcaggtgccgcggcaaggggggcgcggcgttccggcgcagtgggac
cgttccgactccggtgtgctgccgccgagggcaccctccgatgccgatctgatcgcgtgg
atgcggtcgggggacgactcggcgtacggggagctgtaccggcggcacgcgcaggccgtc
cgtcggtacgcccggacctgctgccgggacgcccacaccgccgacgatctgacggccgag
gtcttcgcccggatgctgcaggcggtccgcgggggctccggcccggagcacgccgtacgg
gcctatctgctgacctcggtgcggcgggtcgccgcgacctggacgagttccgccaagcgg
gagcagctggtcgacgacttcgcggtgttcgcggcgcgggcgtcgcgcggggccgaggtg
tcggacagcgacacgctggacctcggggcggatgtgcgggcgatgcacgaggccgagcag
tcgatggcgatgcaggcgttccgttcgctgccggagcggtggcaggccgtgctctggcac
acggaggtcgaggacgagtcgccgagcgaggtcgccaccctcttcggactggacgccaac
ggcacccgggtgctggccagccgcgcgcgggaggggctcaagcaggcgtatctgcaggcc
catgtgagcgccacgctcgccgggaactcggcggagtgcgcccgctacgccgaccggctc
ggggcgtacgcccgcggcagcctgcggacccgggccgaacgggggctgcgcgcccatctg
gaggagtgcgcggcctgccggctggccgccgggcagatcaaggacgtcgccagcgggatc
cccgccgtcgtacccgtcgcggtcatcggatggttcggtgcggccgggtacgcgaaggtg
gccgcgctcgtcgccggtggcgcgggggccggtgcggccggggccgcgggcgcggcggcg
ggggccagcggtggctccgggggcgcgggggcgggcggcggggccgccgcggagggtctc
ggcgcgccggcgaaggccgggatcgcggtgagtgtggccgggatggtcgccgcggctgtg
gcgctcgcgctggcgaacgacgaggtgaaacccaaggagccactggccagaccgcccgcc
tcgcagcccgtcgaggccgctccggagccggaccttccgacggagccggagtcgcggccc
gcgccgcaggtgcccgcgagggtggtgccggcgtccgagccgttgccgacaccgaccccg
tcgccctcccggccgcgcgccgcggctccggctccgcccgcgaagccgccccccgccccc
acgcccacccccacgccgacacccgcaccgccgaggccgtcccccacgccgcccccgaca
cccgctccgccgccccctccccttccctcggccgtctaccggtggaacgaactgcggtac
ggcgtcctcggcgacggcaccgagcccgagatgcggctcggcgggggcagctgggtctgg
cagcggtacgggatgtcggtcgccgggaagcggtacgcgaacggggtgaccgtgcacggc
cgctcctcggtgaccatcgacctcaaccgccgctgcacctcgtacaacgcgctcatcggc
gtcgacgacctgacccacggcctcggccgggtctacttctccgtctacggcgacggggtg
cggctgtggaagtccgggctggtgcgcggcggtgacccggcggttccggtccaggtgagc
ctcagcgggcgggagacggtacggctggtcgtcgagccggacggcccccacgacctggcg
gtgctggcggactgggcggagtcgtcgttccggtgtgagtga
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