Streptomyces caniscabiei: IHE65_26965
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Entry
IHE65_26965 CDS
T08931
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
scae
Streptomyces caniscabiei
Brite
KEGG Orthology (KO) [BR:
scae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scae03021
]
IHE65_26965
Transcription machinery [BR:
scae03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
IHE65_26965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
Sigma70_ECF
HTH_23
HTH_Crp_2
HTH_24
MarR_2
HTH_3
DUF7343
GerE
MarR
HTH_31
KORA
Apolipoprotein
IF2_N
Motif
Other DBs
NCBI-ProteinID:
WEO26508
LinkDB
All DBs
Position
complement(6086604..6087506)
Genome browser
AA seq
300 aa
AA seq
DB search
MSPRLDESHTQRATSASAPEETQDDLAHNPGAALADLPEIPPYDEVGPVDARALSKTLFG
RLESLEEGTYEYSYVRNTLVELNLALVKFAASRFRSRSEPMEDIIQVGTIGLIKAIDRFE
LSRGVEFPTFAMPTIVGEIKRFFRDTSWSVRVPRRLQELRLDLAKAGDELAQKLDRAPTV
GELAERLGLTNDEVVEGMAASNAYTASSLDAQPEEDDSEGALADRIGYEDHGLEGIEYVE
SLKPLIAELPPRDRKILSLRFVAGMTQSEIGDELGISQMHVSRLLSRTLVRLRKGLTLEE
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccccggctcgacgaatcgcatacccagagggcgacgtcggcatccgccccggaa
gagacgcaggacgacctcgcccacaatccgggcgccgcactcgccgacctcccggagatc
cccccgtacgacgaggtgggaccggtggacgcgcgagccctgtccaagaccctcttcggg
cggctcgaatcccttgaggaaggcacgtacgaatactcgtacgtccgcaacaccctggtc
gaactcaacctggctctggtgaagttcgccgcctcccggttccgctcccgcagcgaaccc
atggaggacatcatccaggtcggcaccatcggcctcatcaaggcgatcgaccgcttcgaa
ctgagcaggggcgtcgagttccccacgttcgcgatgccgacgatcgtcggtgagatcaag
cgtttcttccgcgacacgagctggtccgtgcgggtgccgcgcagactccaggagctccgt
ctcgacctggccaaggccggtgacgagctcgctcagaagctcgatcgcgctccgacggtg
ggagagctggcggagcgcctcgggctgacgaacgacgaggtcgtcgaaggcatggcggcg
tcgaacgcgtacaccgcctcgtcgctggacgcccagcccgaggaggacgactccgagggc
gccctggcggaccggatcggctacgaggaccacggcctcgaaggcatcgagtacgtcgag
tccctgaagccgctgatcgccgaactgccgccgcgcgaccggaagatcctgtcgctgcgg
ttcgtggccggcatgacgcagtccgagatcggggacgaactgggcatctcccagatgcat
gtctcccgcctgctgtcccgcacgctggtgcgcctgcgcaagggcctgaccctggaggag
tga
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