Streptomyces caniscabiei: IHE65_28000
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Entry
IHE65_28000 CDS
T08931
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
scae
Streptomyces caniscabiei
Brite
KEGG Orthology (KO) [BR:
scae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scae03400
]
IHE65_28000
DNA repair and recombination proteins [BR:
scae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
IHE65_28000
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
DUF559
MTES_1575
DUF7156
Motif
Other DBs
NCBI-ProteinID:
WEO26689
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All DBs
Position
complement(6334879..6335343)
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AA seq
154 aa
AA seq
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MSEDPKWEAPEGSWASSAARRRNMQAIRNRDTKPEQLIRRLVHAQGLRYRVCARPLPDLR
RTADLVFRPVKVAVFIDGCYWHGCPEHYVPPKTNSGYWSEKVLRNVTRDRDTDERLKEAG
WLVLRFWEHEPSDACANTITATVLARRTIDSRHA
NT seq
465 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgaagatcccaagtgggaagcgccagagggctcctgggcttcatcagccgctcgc
cgtcgcaacatgcaggcgatccgcaatcgcgacaccaaacccgagcagctgatccggcgc
ttggtgcacgcacaagggctgcgttaccgggtgtgcgcgcgcccgctgcctgaccttcgc
cgtactgcggacttggttttccgcccagtgaaggtggcggtcttcattgatggctgctac
tggcatgggtgccctgagcactatgttccaccgaaaacgaactcgggctactggtccgaa
aaggttctgcgcaacgtgacacgtgaccgcgacaccgatgagcgactcaaggaagccgga
tggcttgtgctccgtttttgggagcacgagccatccgacgcctgcgcgaacacaatcact
gcaactgtccttgcacgccggacaattgactcacgacacgcctga
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