Streptomyces caniscabiei: IHE65_30185
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Entry
IHE65_30185 CDS
T08931
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
scae
Streptomyces caniscabiei
Pathway
scae03030
DNA replication
scae03430
Mismatch repair
scae03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IHE65_30185 (holA)
03430 Mismatch repair
IHE65_30185 (holA)
03440 Homologous recombination
IHE65_30185 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scae03032
]
IHE65_30185 (holA)
03400 DNA repair and recombination proteins [BR:
scae03400
]
IHE65_30185 (holA)
Enzymes [BR:
scae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IHE65_30185 (holA)
DNA replication proteins [BR:
scae03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
IHE65_30185 (holA)
DNA repair and recombination proteins [BR:
scae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
IHE65_30185 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
WEO27089
LinkDB
All DBs
Position
6788396..6789382
Genome browser
AA seq
328 aa
AA seq
DB search
MAKKTVNDDPLAPVTLAVGQEELLLDRAVQVVVAAAKAADADTDVRDLTSDQVQPGTLAE
LTSPSLFAERKVVVVRNAQDLSADTVKDVKAYLGAPAEEITLVLLHAGGAKGKGLLDAAR
KVGAREVACPKMTKPGDRLAFVRGEFRTLGRSATPEACQALVDAIGSDLRELAAAASQLV
ADVEGTIDEAVVGRYYTGRAEASSFEVADRAVEGRAAEALEALRWSLATGVAPVLITSAL
AQGVRAIGKLSSARGGRPGDLARELGMPPWKIDRVRQQMRGWTPEGVAVALRAVAEADAG
VKGGGDDPEYALEKAVVVIARAARSRRG
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atggccaagaagactgtgaacgatgatcccctcgcccccgtgacgttggccgtggggcag
gaggagttgctgctcgaccgggccgtgcaggtggtggtggccgcggcgaaagccgcggat
gccgacacggatgtgcgggatctgacctcggaccaggtgcagcccggcacgctcgcggag
ctgacgagtccgtcgctcttcgcggagcgcaaggtcgtggtcgtgcggaacgcgcaggat
ctgtcggccgacacggtcaaggacgtgaaggcgtatctgggggctcccgccgaggagatc
accctggtgctgctgcacgcgggcggcgccaagggcaaggggctgctggacgcggcgcgc
aaggtcggggcgcgggaggtggcgtgccccaagatgacgaagccgggggatcggctggcg
ttcgtgcggggggagttccggacgctcgggcggtccgcgacgccggaggcgtgccaggcg
ctcgtcgacgcgatcgggagtgatctgcgggagctggcggccgcggcgtcgcagttggtc
gcggacgtcgaggggacgatcgacgaggcggtggtcgggcggtactacaccgggcgggcc
gaggcgtcgagcttcgaggtggccgaccgggccgtcgaggggcgggcggcggaggcgttg
gaggcgctgcggtggtcgttggcgacgggggtggcgccggtgttgatcaccagtgcgttg
gctcagggggtgcgggcgatcgggaagttgtcgtcggcgcggggtgggcggccgggggat
ctcgcgcgggagttggggatgccgccgtggaagatcgatcgggtgcggcagcagatgcgg
gggtggacgccggagggggtggctgtggcgttgcgggcggtcgcggaggcggacgccggg
gtcaagggtgggggcgatgatcccgagtacgcgttggagaaggcggttgtggtgatcgct
cgggcggctcggtcgcgtcgagggtga
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