Streptomyces caniscabiei: IHE65_30200
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Entry
IHE65_30200 CDS
T08931
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
scae
Streptomyces caniscabiei
Pathway
scae00061
Fatty acid biosynthesis
scae00071
Fatty acid degradation
scae01100
Metabolic pathways
scae01212
Fatty acid metabolism
scae02024
Quorum sensing
scae04146
Peroxisome
Module
scae_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
scae00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
IHE65_30200
00071 Fatty acid degradation
IHE65_30200
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
IHE65_30200
09145 Cellular community - prokaryotes
02024 Quorum sensing
IHE65_30200
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
scae01004
]
IHE65_30200
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
scae04147
]
IHE65_30200
Enzymes [BR:
scae01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
IHE65_30200
Lipid biosynthesis proteins [BR:
scae01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
IHE65_30200
Exosome [BR:
scae04147
]
Exosomal proteins
Exosomal proteins of breast milk
IHE65_30200
Exosomal proteins of breast cancer cells
IHE65_30200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
WEO27092
LinkDB
All DBs
Position
6792542..6794419
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AA seq
625 aa
AA seq
DB search
MSDTQTLIENRPPSVAALFLERVAATPDGEAYRYPVPPASGEGPSDWKSLSWAESAERVY
AVAAGLIELGVQPEQRVALASSTRIEWILADLGIMCAGAATTTVYPQTNAEESAYILSDS
SSRILIAEDAAQLAKAREKKAELPELTHVVVIDTEGADLSEDWVLSLAELEKRGAAYLEK
KPDLIKEKVGAITKDQLATLIYTSGTTGRPKGVRLPHDNWSYMAKAIAATGLVSAEDVQY
LWLPLAHVFGKVLTSGQIEVGHVTAVDGRIDKIIENLPVVQPTYMAAVPRIFEKVYNGVV
AKARAGGPAKYKIFQWAAGVSREYAKTSQDNFRRTGTASVPFALGAKHAVADKLVYAKLR
EAFGGRLRACVSGSVALAPEIGFFFAGAGIHILEGYGLTETSAASFVNPGEAYRTGTVGK
PLPGCEVRIADDGEILLRGPGVMEGYHKLPEKTAEVLEADGWFHTGDIGELSPDGYLRIT
DRKKDLFKTSGGKYIAPTEIEGQFKSLCPFTSNVMVIGADRNFCTALIALDEPSLQGWAA
ENGLAGKSYEEIITAPATVEMVDGYVKQLNEGLQRWQTIKKFRLLPRDLDVEHGELTPSL
KLKRPVVEKEYQHLIDEMYAGAREA
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgacacacagaccctgatcgagaaccgtccgccctcggtggcggccctcttcctc
gagcgcgtggcggccacgcccgacggcgaggcctaccgctacccggtgccaccggcctcc
ggggaggggccctccgactggaagtcgctgagctgggcggagtcggccgaacgggtctac
gccgtcgcggccggactgatcgagctgggtgtgcagccggagcagcgggtcgccctcgcc
tcgtcgacgcgcatcgagtggatcctcgccgacctcggcatcatgtgcgccggtgccgcc
accacgaccgtctatccgcagaccaacgccgaggagtccgcgtacatcctctcggactcc
tccagccggatcctcatcgcggaggacgcggcgcagctcgccaaggcccgggagaagaag
gccgagctgcccgagctgacgcacgtcgtggtcatcgacaccgagggcgcggacctctcg
gaggactgggtgctctccctggccgagctggagaagcgcggcgcggcgtacctggagaag
aagcccgacctgatcaaggagaaggtcggcgcgatcaccaaggaccagctggccaccctc
atctacacctcgggcaccacgggccgccccaagggtgtccggctgccgcacgacaactgg
tcgtacatggcgaaggcgatcgccgcgaccgggctggtcagtgccgaggacgtgcagtac
ctgtggctgccgctcgcgcacgtgttcggcaaggtgctcaccagcggccagatcgaggtc
gggcacgtcaccgcggtcgacggccggatcgacaagatcatcgagaacctgccggtggtg
cagccgacgtacatggcggccgtgccccgcatcttcgagaaggtctacaacggcgtcgtc
gccaaggcccgcgcgggcggcccggccaagtacaagatcttccagtgggcggccggggtc
tcccgcgagtacgccaagacgagccaggacaacttccgccgcaccgggacggcctcggtg
ccgttcgcgctcggcgcgaagcacgcggtcgccgacaagctggtgtacgccaagctccgc
gaggcgttcggcggccggctgcgggcctgtgtctccgggtcggtcgcgttggcgcccgag
atcgggttcttcttcgccggcgccggcatccacatcctggagggctacggcctcacggag
acctcggcggcgtccttcgtgaacccgggcgaggcgtaccgcaccggcacggtcggcaag
ccgctgcccggctgcgaggtgcgcatcgcggacgacggcgagatcctgctgcgcgggccc
ggtgtgatggagggctaccacaagctgccggagaagacggcggaggtgctggaggccgac
gggtggttccacaccggtgacatcggggagctgtcgcccgacgggtacctgcggatcacc
gaccggaagaaggacctgttcaagacctccggcggcaagtacatcgcgccgaccgagatc
gaggggcagttcaagtcgctgtgccccttcacctccaacgtcatggtgatcggcgcggac
cgtaacttctgcacggcgctcatcgcgctcgacgagccgtccctccaggggtgggctgcg
gagaacgggctggccgggaagtcgtacgaggagatcatcacggcgccggcgacggtggag
atggtcgacgggtacgtcaagcagctcaacgaggggttgcagcggtggcagacgatcaag
aagttccggttgttgccgcgggatctcgatgtcgagcacggtgagctgacgccgagcctg
aagctgaagcggccggtcgtggagaaggagtaccagcacctcatcgatgagatgtacgcg
ggggctcgggaggcgtag
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