Streptomyces caniscabiei: IHE65_33860
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Entry
IHE65_33860 CDS
T08931
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
scae
Streptomyces caniscabiei
Pathway
scae03030
DNA replication
scae03410
Base excision repair
scae03420
Nucleotide excision repair
scae03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IHE65_33860 (polA)
03410 Base excision repair
IHE65_33860 (polA)
03420 Nucleotide excision repair
IHE65_33860 (polA)
03440 Homologous recombination
IHE65_33860 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scae03032
]
IHE65_33860 (polA)
03400 DNA repair and recombination proteins [BR:
scae03400
]
IHE65_33860 (polA)
Enzymes [BR:
scae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IHE65_33860 (polA)
DNA replication proteins [BR:
scae03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
IHE65_33860 (polA)
DNA repair and recombination proteins [BR:
scae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
IHE65_33860 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IHE65_33860 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
DNA_pol_lambd_f
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
WEO27742
LinkDB
All DBs
Position
7651436..7654162
Genome browser
AA seq
908 aa
AA seq
DB search
MAETASKKTDSTPGGSRPRLMLMDGHSLAYRAFFALPAENFTTATGQPTNAIYGFASMLA
NTLRDEAPTHFAVAFDVSRKTWRSEEFTEYKANRSKTPDEFKGQVELIGELLDAMHAARF
AVDGFEADDIIATLATQAEAEGFEVLIVTGDRDSFQLVSEHTTVLYPTKGVSELTRFTPE
KVFEKYGLTPAQYPDFAALRGDPSDNLPGIPGVGEKTAAKWINQFGSFADLVERVEEVKG
KAGQNLRDHLEAVKLNRRLTEMVRTVELPKGVGDLERAPYDRKAVAMVLDTLEIRNPSLR
ERLLAVDPGAEEADTASPAAPGVEVDGTVLASGELAPWLTEHGTDVLGVATVDTWALGTG
SVTEIALAAGGGAAAWFDPTQLDETDETAWAAWLSDIARPKVFHNAKSAMRVFAEHGWTV
DGVSMDTALAAYLVKPGRRSFDLDALSLEYLGRELAPAATADGQLAFGADEGAEADALMV
QARAILDLGEAFGERLEEVGAAELLRDVELPTSALLARMERHGIAADRAHLEAMEQMFAS
AVQQAVKEAHAAAGHEFNLGSPKQLQEVLFGELGLPKTKRTKTGYTTDADALAWLAGQTD
NELPVVMLRHREQARLRVTVEGLIKMVAADGRIHTTFNQTVAATGRLSSVDPNLQNIPVR
TDEGRAIRRGFVVGEGFESLMTADYSQIELRVMAHLSEDAGLIEAFTSGEDLHTTAAAQV
FGVEQSAVDAEMRRKIKAMSYGLAYGLSAFGLSQQLNIDAGEARSLMDAYFERFGGVRDY
LRRAVEEARATGYTATLFGRRRYLPDLNSDNRQRREAAERMALNAPIQGTAADIVKIAML
NVGRALDEAGLASRMLLQVHDEIVLEIAPGERERTEQLLRHEMSNAVHLRAPLDVSVGHG
PDWESAAH
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
gtggcagagacagcatcgaagaagaccgacagcacccccggcggcagccgtccccggctc
atgctcatggacgggcactcgctggcctaccgcgcgttcttcgcgctgcccgcggagaac
ttcacgacggcgacgggccagccgaccaacgcgatctacggcttcgcgtcgatgctggcg
aacacgctgcgcgacgaggcccccacgcacttcgcggtcgcgttcgacgtctcccgcaag
acgtggcgctcggaggagttcaccgagtacaaggcgaaccgctccaagaccccggacgag
ttcaagggccaggtcgagctgatcggcgagctgctcgacgcgatgcacgccgcccgcttc
gccgtcgacggcttcgaggccgacgacatcatcgccaccctcgccacccaggccgaggcc
gagggcttcgaggtcctcatcgtcaccggcgaccgcgactccttccagctcgtcagcgag
cacaccaccgtgctctacccgacgaagggcgtctcggagctgacccggttcaccccggag
aaggtgttcgagaagtacggcctcaccccggcccagtacccggacttcgcggccctgcgc
ggcgacccgtccgacaacctccccggcatccccggcgtcggcgagaagaccgccgcgaag
tggatcaaccagttcggttcgttcgcggatctcgtcgagcgcgtcgaggaggtcaagggc
aaggccgggcagaacctccgcgaccacctggaggccgtcaagctcaaccgccgcctcacc
gagatggtccgcacggtcgaactgcccaagggcgtgggcgacctcgagcgcgccccgtac
gaccgcaaggccgtcgcgatggtcctggacaccctggagatccgcaacccctcgctgcgc
gagcggctgctcgccgtcgacccgggcgccgaggaggccgacaccgcctcgccggccgcc
cccggcgtcgaggtggacggcacggtgctcgcctccggcgaactggccccctggctcacc
gagcacggcacggacgtcctcggcgtcgccaccgtcgacacctgggcgctcggcaccggc
tcggtcaccgagatcgcgctcgccgccggcgggggagcggccgcatggttcgaccccacg
cagctggacgagaccgacgagacggcgtgggcggcctggctctccgacatcgcccggccg
aaggtgttccacaacgccaagagcgcgatgcgggtcttcgccgagcacggctggaccgtg
gacggcgtgtccatggacaccgcgctcgccgcctacctggtcaagccgggccgccgctcc
ttcgacctggacgcgctctccctggagtacctgggccgcgagctggcccccgccgccacg
gccgacggccagctggccttcggcgcggacgagggcgccgaggccgacgcgctgatggtg
caggcccgcgcgatcctcgacctgggcgaggccttcggggagcggctggaggaggtcggc
gcggcggagctgctgcgtgacgtggagctgcccacctccgcgctgctggcccggatggag
cggcacggcatcgccgccgaccgggcgcatctggaggccatggagcagatgttcgcgagc
gccgtgcagcaggcggtgaaggaggcgcacgcggcggcggggcacgagttcaacctgggc
tcgcccaagcagctccaggaggtcctcttcggcgagctgggcctgcccaagaccaagcgc
acgaagacgggctacaccacggacgcggacgccctcgcctggttggccggccagacggac
aacgaactgccggtcgtcatgctccgccaccgcgagcaggcgaggctccgggtcaccgtc
gagggcctgatcaagatggtcgccgcggacggccggatccacaccaccttcaaccagacg
gtcgccgccacgggtcgcctgtcctcggtcgacccgaacctgcagaacatccccgtccgc
acggacgagggccgcgccatccgccgcggcttcgtcgtgggcgagggcttcgagtccctg
atgaccgcggactacagccagatcgaactgcgcgtgatggcccacctctccgaggacgcg
ggcctgatcgaggcgttcacctccggcgaggacctgcacaccacggccgccgcccaggtg
ttcggggtcgagcagtcggcggtggacgcggagatgcgccgcaagatcaaggcgatgtcc
tacggcctggcctacgggctgtccgcgttcggcctctcccagcagctgaacatcgacgcg
ggcgaggcgcgctcgctgatggacgcgtacttcgagcggttcggcggggtgcgggactat
ctgcgccgggccgtggaggaggcgcgggccacgggctacacggcgacgctcttcggccgc
cgccgctatctccccgacctcaacagcgacaaccgccagcgccgcgaggccgcggagcgg
atggctctgaacgcgccgatccagggcaccgccgccgacatcgtcaagatcgccatgctc
aacgtgggccgcgccctggacgaggcgggcctcgcctcccggatgctcctccaggtccac
gacgaaatcgtcctggagatcgcccccggcgaacgcgaacgcaccgaacagctcctccgc
cacgagatgtccaacgcggtccatctgcgggcccccctggacgtctcggtgggccacggc
ccggactgggagtcggcggcgcactag
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