Streptomyces caniscabiei: IHE65_34655
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Entry
IHE65_34655 CDS
T08931
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
scae
Streptomyces caniscabiei
Pathway
scae00040
Pentose and glucuronate interconversions
scae01100
Metabolic pathways
scae02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
scae00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
IHE65_34655
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IHE65_34655
Enzymes [BR:
scae01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
IHE65_34655
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
WEO27888
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Position
7828842..7830146
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AA seq
434 aa
AA seq
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MTGRGRSLRLLALSGVLGCALTTPAGAESRDIGRDTLAADDGWAAADGGTTGGSTADDAH
VLTVRTRAELVRALDGGSATPKIIRIAGAIDANTSDDGERLDCADYATDGYDLRKYLAAY
DPRTWGSAKPAGPQEEARQASAAKQAERVELAVGSNTTIVGLKGAVLKGASLQLRGADNV
IVRDLELRDAYDCFPVWQPNTGGLGDWKTAYDNIWVRGSSHVWIDHVTISDQGHPDEDEP
MYFGRNYLRHDGLLDITNASDLVTVSWSRFADHDKGILIGNGDTATGDRGRLRVTLHHNQ
FENVVQRAPRVRFGQVHLYNNRYVVPAGAHDYRYSLGVSTESAVYAENNAFTTPGHIEAA
DLVKSWNGTALHQTGTLFNGYPVDLLAIHNAYNSGSERDLTADVGWTPTLHQKIDSAGRA
DREVARGAGAGRIR
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgaccggacgcgggaggagcctgcgactcctcgccctgtcgggggtgctgggctgcgcg
ctcaccaccccggccggggcggagtcccgggacatcggccgggacacgctcgcggcggac
gacggctgggcggcggccgacggtggtaccacggggggttccaccgccgacgacgcccat
gtcctcaccgtccgcacccgcgccgaactggtgcgcgcgctcgacggaggcagcgccacc
ccgaagatcatccggatcgccggggccatcgacgccaacacctccgacgacggcgaacgg
ctcgactgcgccgactacgcgaccgacggctacgacctgcggaagtacctggccgcctac
gacccgcgcacctggggctccgccaagcccgccggcccccaggaggaggcccgtcaggcg
tcggcggccaagcaggccgaacgggtcgagctggccgtcggctccaacaccaccatcgtc
ggcctcaagggcgccgtcctgaagggcgcgagcctccagctcaggggtgcggacaacgtc
atcgtccgcgacctcgaactgcgcgacgcctacgactgcttccccgtctggcagcccaac
accggcggcctcggcgactggaagacggcgtacgacaacatctgggtgcgtgggtccagc
cacgtctggatcgaccacgtcacgatctccgaccaggggcaccccgacgaggacgagccg
atgtacttcggccgcaactaccttcgccacgacggcctgctcgacatcaccaacgcctcc
gacctggtcaccgtctcctggagccgcttcgccgaccacgacaagggcatcctgatcggc
aacggcgacacggccaccggcgaccggggcaggctgcgggtgacgctgcaccacaaccag
ttcgagaacgtcgtgcagcgcgcgccgcgcgtccgcttcggacaggtgcacctgtacaac
aaccgctacgtcgtcccggccggcgcccacgactaccggtactccctcggcgtctccacc
gagtccgccgtgtacgcggagaacaacgcgttcaccacacccggccacatcgaggccgcc
gacctggtgaagagctggaacggcaccgccctgcaccagacgggcaccctcttcaacggc
tatccggtggatctcctggccatccacaacgcctacaactccggcagcgagcgtgatctc
acggccgacgtgggctggacgcctaccctgcaccaaaagatcgacagcgccgggagggcc
gaccgagaggtggcacgcggcgcgggcgcagggaggatccgatga
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