Streptomyces caniscabiei: IHE65_34690
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Entry
IHE65_34690 CDS
T08931
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
scae
Streptomyces caniscabiei
Pathway
scae00040
Pentose and glucuronate interconversions
scae01100
Metabolic pathways
scae02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
scae00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
IHE65_34690
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IHE65_34690
Enzymes [BR:
scae01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
IHE65_34690
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
WEO27895
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Position
7838242..7839549
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AA seq
435 aa
AA seq
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MRPHNWHAHVMTSVVGCTALVLGVAGTGVAQAQGRDLGRQVLGAGDGWGSAEGGTTGGSA
ADAEHVYTVTTWAEFKTALATGGNAPKIIKVKGMIDAVAEGCEAFVAGGYDLQQYLKDYD
PATYGNDQVAKGPQEDARVASMANQDSAIKANIPSNTTIVGVGKNSGILGGSLQIKGVSN
VILRNLTIEAPLDCFPKWDPTDDNNTGNWNSEYDAVVVFGTDHVWLDHNTFTDGRYPDSE
RPVYFGKVFQQHDGLTDIVRGSNYVTVSWNRFENHDKNMLIGNSDGTAALDAGKLKVTMH
HNRFDGILQRSPRVRFGQVDVYNNHYLVTEEQKDDYYIFGVGLSSQLHASDNAITLPAGA
SVGKALKRWNDSPLTAENNYVNGRLTDLIAVHNAEIPSEFLRSGAGWTPTLRTKVDSPRA
VPGIVANRAGAGKVC
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcctcataactggcatgcccatgtcatgacatccgtcgtcggctgcaccgcgctc
gtgctcggggtcgccggcaccggtgtcgcccaggcccagggccgtgatctcggccggcag
gtcctcggcgccggggacggatggggctcggccgaaggcggcaccaccggtggctcggcg
gccgacgccgagcacgtctacacggtcaccacctgggccgagttcaagaccgcgctggcg
accggcggaaacgccccgaagatcatcaaggtgaaggggatgatcgacgccgtcgccgag
ggctgcgaggccttcgtcgccggcgggtacgacctccagcagtacctgaaggactacgac
ccggccacctacggcaacgaccaggtcgccaagggcccgcaggaggacgcgcgcgtcgcc
tccatggccaaccaggactcggcgatcaaggccaacatccccagcaacaccaccatcgtc
ggcgtcggcaagaactccggcatcctcggcggcagcctccagatcaagggtgtctccaac
gtcatcctgcgcaacctcaccatcgaggcgccgctcgactgcttccccaagtgggacccc
accgacgacaacaacaccggcaactggaactccgagtacgacgccgtcgtcgtcttcggc
accgaccacgtctggctcgaccacaacacgttcaccgacgggcggtaccccgacagcgag
cggccggtctacttcggcaaggtcttccagcagcacgacggcctgaccgacatcgtgcgc
ggctccaactacgtgaccgtctcctggaaccgcttcgagaaccacgacaagaacatgctg
atcggcaacagcgacggcaccgccgccctcgacgccggcaagctcaaggtcaccatgcac
cacaaccgcttcgacgggatcctccagcgctccccgcgcgtgcggttcggccaggtcgac
gtctacaacaaccactacctggtgaccgaggagcagaaggacgactactacatcttcggt
gtcggcctgtcctcgcagctccacgccagcgacaacgcgatcacgctgccggcgggcgcg
agcgtcggcaaggccctgaagcggtggaacgactccccgctcaccgccgagaacaactac
gtcaacggcaggctgacggacctcatcgccgtccacaacgccgagatcccctcggagttc
ctccggtccggcgccgggtggacgcccaccctgcggaccaaggtcgactcgccgcgcgcg
gtgccgggcatcgtcgcgaaccgcgcgggcgccgggaaggtctgctga
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