Streptomyces caniscabiei: IHE65_34725
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Entry
IHE65_34725 CDS
T08931
Name
(GenBank) rhamnogalacturonan lyase B N-terminal domain-containing protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
scae
Streptomyces caniscabiei
Brite
KEGG Orthology (KO) [BR:
scae00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
IHE65_34725
Enzymes [BR:
scae01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
IHE65_34725
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Motif
Pfam:
RhgB_N
CBM-like
fn3_3
CarboxypepD_reg
UCR_Fe-S_N
Motif
Other DBs
NCBI-ProteinID:
WEO27902
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Position
complement(7847300..7848982)
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AA seq
560 aa
AA seq
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MSTHKRRLTRRRVLGAGALGVAATGAAVAGGTGLLSTASAAGFGHSDDGKNFVVDTGANL
VFKVSKTTGDLTSLRYRGKEYEGYGGRHSHVESGLGTSTVTIRQSGATILIKAVHGAITQ
WYAARSGQNNVYLWTNKANASFTATRFLVRLKPGMFPNEGPDSWIEASDKVIEAGDVWRR
ADGTTHSKHYAGKRVIDYDHIGFTTGSVGLWMVRSNHEKASGGPFYRSLLRHSNDLGAGL
YEILHYHQAQTEAERFGLQGPYVLAFTDGGAPSSSLAHDRLDTSWVDGLGITGWVGRAGR
GRVAGVGLKGMDPKYAYTVGFANADAQYWARAAAGTGAFSCKGMLPGTYTLTVFKGELAV
HTREVKVTAGGSTALNSLALTGDPSAARTVWRLGDWDGTPGGFKNAKLMTYAHPSDGRAA
KWTGDVTLGGGDPAASFPAYVWQDVNDGVRILFKLTPAQAAAAHTLRIGVTDAFAGGRPR
VSINDWVSPVPAAPKQPSTRSLTTGSYRGNNHTFLYSVPASAWKSNTSEYNVLTLDIVSG
SSGTGFLSPGTSFDCVDLLA
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
ttgagcacccacaagagacgtctcacccgtcgacgcgtcctcggagccggcgcgctcggt
gtcgccgccaccggcgccgccgtcgcgggcggcaccggcctgctctccacggcgtccgcg
gccggcttcggtcactcggacgacggaaagaacttcgtcgtggacaccggggcgaacctg
gtcttcaaggtctccaagaccaccggcgacctcacctcgctgcgctaccggggcaaggag
tacgagggctacggcggcaggcactcgcatgtggagtcgggtctcggcacctcgaccgtc
acgatccggcagtccggggcgacgatcctgatcaaggccgtgcacggcgcgatcacccag
tggtacgcggcccgcagcggccagaacaacgtctacctgtggacgaacaaggcgaacgcc
tccttcacggccacccgcttcctcgtccgcctcaagcccgggatgttcccgaacgagggc
cccgactcctggatcgaggcctccgacaaggtcatcgaggccggtgacgtctggcggcgc
gcggacggcacgacccactccaagcactacgcgggcaagcgggtgatcgactacgaccac
atcggcttcaccaccggttcggtcggcctctggatggtccgctccaaccacgagaaggcc
tccggcggccccttctaccgttcgctgctgcgccactccaacgacctcggcgcgggcctc
tacgagatcctgcactaccaccaggcccagaccgaggcggaacgtttcggcctccagggt
ccgtacgtcctggccttcaccgacggcggggcgccctcatcctccctggcccacgaccgg
ctggacacctcctgggtggacggcctcggcatcaccggctgggtcggcagggccggacgc
ggcagggtggccggcgtggggctcaagggcatggacccgaagtacgcctacacggtcggc
ttcgccaacgccgacgcccagtactgggccagggcggcggccggcaccggcgccttctcc
tgcaaggggatgctgccggggacgtacacgctgaccgtcttcaagggcgagctggccgtg
cacacccgggaggtgaaggtgacggcgggcggctcgacggcgctgaactccctcgccctc
accggcgatccgtccgccgcgaggaccgtctggcggctcggcgactgggacgggacgccc
ggcgggttcaagaacgcgaagctgatgacgtacgcgcatccgtccgacggccgcgcggcg
aagtggacgggagacgtcacgctgggcggcggcgatccggcggcctccttcccggcgtac
gtctggcaggacgtcaacgacggtgtccggatcctcttcaagctgacgcccgcgcaggcc
gccgccgcgcacacgctgcggataggtgtcacggacgcgttcgcgggcgggcgtccccgg
gtatccatcaatgactgggtctcgccggtcccggcggccccgaaacagccgtccacccgt
tcgctcaccacgggttcgtaccgggggaacaaccacaccttcctctacagcgtccctgca
agtgcgtggaagtcgaacaccagtgagtacaacgttctgacactcgacatcgtcagtggt
tcgagcggcacgggcttcctcagcccgggcacctcgttcgactgcgtggacctgctggcc
tga
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