Streptomyces caniscabiei: IHE65_36230
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Entry
IHE65_36230 CDS
T08931
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
scae
Streptomyces caniscabiei
Brite
KEGG Orthology (KO) [BR:
scae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
scae03051
]
IHE65_36230 (pafA)
Enzymes [BR:
scae01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
IHE65_36230 (pafA)
Proteasome [BR:
scae03051
]
Prokaryotic proteasome
Bacterial regulatory particles
IHE65_36230 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pup_ligase
Ribosomal_L19
HTH_25
Motif
Other DBs
NCBI-ProteinID:
WEO28182
LinkDB
All DBs
Position
8179006..8180367
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AA seq
453 aa
AA seq
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MDRRIFGLENEYGVTCTFRGQRRLSPDEVARYLFRRVVSWGRSSNVFLRNGARLYLDVGS
HPEYATPECDNVTELVTHDKAGERILEGLLVDAERRLHEEGIAGDVYLFKNNTDSAGNSY
GCHENYLVARHGEFSRLADILIPFLVTRQLLCGAGKVLQTPRGAVYCVSQRAEHIWEGVS
SATTRSRPIINTRDEPHADAERYRRLHVIVGDSNMSETTMLLKVGATDLVLRMIEAGTVM
RDLTLENPIRAIREVSHDITGRRKVRLASGREASALEVQREYYEKAVDFVERRGIRTGTV
EQVLELWGRTLDAIEAEDLDRIGTEIDWVMKYKLIERYRAKHNMTMSHPRVAQIDLAYHD
IHRRRGLYYLLERKGQATRICNDLKIFEGKSVPPQTTRARLRGDFIRRAQEQRRDFTVDW
VHLKLNDQAQRTVLCKDPFRSVDDRVEKLIAGM
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggaccgccgcattttcgggctggagaacgagtacggcgtcacatgtacgttcagggga
cagcgccgtctgtctcctgacgaggtggcgcggtacctcttccgccgtgtcgtgtcatgg
ggccgcagcagcaatgtgtttctgcggaacggggcccgcctctatctcgacgtgggctca
catccggaatacgcgacacccgaatgtgacaacgtgaccgaactcgtcactcacgacaag
gccggcgagcgcattctcgaaggactgctggtcgacgccgaacgccgcctgcacgaggag
ggaatcgcgggcgacgtctacctcttcaagaacaacacggactcggcgggcaactcgtac
ggttgccacgagaactatctggtggcccggcacggggagttctcccgtctcgcggacatc
ctgattccgttcctggtcacccgacagctgctgtgcggcgcgggcaaggtgctgcagacg
ccgcgtggtgcggtgtactgcgtgagccagcgcgcggagcacatctgggagggcgtcagc
tcggcgacgacccgctcccggccgatcatcaacacccgggacgagccgcacgcggacgcc
gagcggtaccgccgtctccacgtcatcgtgggcgactcgaacatgtccgagacgaccatg
ctgctcaaggtcggtgccaccgacctggtgctgcgcatgatcgaggcgggcacggtcatg
cgcgacctcaccctggagaacccgatccgggcgatccgcgaggtcagccatgacatcacc
ggccgtcgcaaggtgcggctggccagcggccgggaggcctccgcgctggaggtgcagcgc
gagtactacgagaaggccgtggacttcgtggagcgccgcggcatccgtacgggcaccgtc
gagcaggtcctggagctgtggggccgcacgctggacgcgatcgaggccgaggacctcgac
cggatcggtaccgaaatcgactgggtgatgaagtacaagctcatcgagcggtaccgggcc
aagcacaacatgaccatgtcgcatccgcgggtcgcgcagatagacctcgcgtatcacgac
atccaccgccgtcgtggcctctactacctgctggagaggaaaggtcaagccacccgcatc
tgcaatgacttgaagatcttcgagggcaagtcggtaccgccgcagaccactcgggcccgg
ttgcgcggtgacttcatccggcgcgctcaggaacagcgccgggatttcacggtcgactgg
gtgcatctcaagctcaacgaccaggcacaacgcacggtgttgtgcaaggacccgttccgt
tcggtggacgaccgggtggagaagctgatcgccggaatgtga
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